Installing ggtree #uncommon error >:(

265 views
Skip to first unread message

Muhammad Isa Ananta

unread,
Sep 8, 2022, 10:32:22 AM9/8/22
to ggtree
Anyone in here, please help me >:((((

I tried to install ggtree with the given code in here https://bioconductor.org/packages/release/bioc/html/ggtree.html

The installation is works for a while

```r
BiocManager::install("ggtree")
'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details

replacement repositories:
    CRAN: https://cran.usk.ac.id

Bioconductor version 3.15 (BiocManager 1.30.18), R 4.2.1 (2022-06-23 ucrt)
Installing package(s) 'ggtree'
trying URL 'https://bioconductor.org/packages/3.15/bioc/bin/windows/contrib/4.2/ggtree_3.4.2.zip'
Content type 'application/zip' length 912374 bytes (890 KB)
downloaded 890 KB

package ‘ggtree’ successfully unpacked and MD5 sums checked

```
BUT, when I call the library, then the R said :

```
Error: package or namespace load failed for ‘ggtree’:
 object ‘patchworkGrob’ is not exported by 'namespace:patchwork'

```
I also tried this thread to solve my problem but still like that >:(((
# https://support.bioconductor.org/p/9139604/

My latest R version is 4.2.1 (2022-06-23)
Reply all
Reply to author
Forward
0 new messages