Converting bio2rdf to relational DB format

21 views
Skip to first unread message

David Příhoda

unread,
Feb 4, 2018, 5:08:21 PM2/4/18
to bio2rdf
Hi everyone,

During my diploma thesis internship at Merck I created an open-source tool for converting big RDF datasets to relational database, JSON and other formats. 

Check out chapter 5 and 6 to see how I converted bio2rdf to a relational database model and used Tableau to visualize the results. The thesis is here: http://davidprihoda.com/rdf2x/Distributed_Conversion_of_RDF_Data_to_the_Relational_Model.pdf

The code is available on github: https://github.com/Merck/rdf2x.

Looking forward to any comments,
Cheers,
David Příhoda

Kingsley Idehen

unread,
Feb 5, 2018, 11:09:40 AM2/5/18
to bio...@googlegroups.com

I assume you are aware of the fact that you could just as well have produced a CSV query solution from SPARQL Query endpoints too, regarding Tableau or any other tool that consumes relations in tabular form.


[1] https://medium.com/virtuoso-blog/tagged/tableau

[2] https://medium.com/openlink-software-blog/using-linked-data-to-enhance-odbc-jdbc-ado-net-ole-db-data-sources-e152aed3b60


-- 
Regards,

Kingsley Idehen	      
Founder & CEO 
OpenLink Software   (Home Page: http://www.openlinksw.com)

Weblogs (Blogs):
Legacy Blog: http://www.openlinksw.com/blog/~kidehen/
Blogspot Blog: http://kidehen.blogspot.com
Medium Blog: https://medium.com/@kidehen

Profile Pages:
Pinterest: https://www.pinterest.com/kidehen/
Quora: https://www.quora.com/profile/Kingsley-Uyi-Idehen
Twitter: https://twitter.com/kidehen
Google+: https://plus.google.com/+KingsleyIdehen/about
LinkedIn: http://www.linkedin.com/in/kidehen

Web Identities (WebID):
Personal: http://kingsley.idehen.net/public_home/kidehen/profile.ttl#i
        : http://id.myopenlink.net/DAV/home/KingsleyUyiIdehen/Public/kingsley.ttl#this

Reply all
Reply to author
Forward
0 new messages