ImportError: cannot import name 'GC' from 'Bio.SeqUtils'

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Winona Wijaya

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Feb 28, 2024, 12:21:25 AM2/28/24
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Hello! I've been using binsanity since 2021 and I've never had any problems until I re-installed everything. Binsanity-profile worked alright, but when I get to Binsanity-wf it's not working. I am not sure if it's a biopython problem or a Binsanity problem, would you look at it? Thanks!


Input: Binsanity-wf -h

Error:

Traceback (most recent call last):

  File "~/miniconda3/envs/binning/bin/Binsanity-wf", line 11, in <module>

    from Bio.SeqUtils import GC

ImportError: cannot import name 'GC' from 'Bio.SeqUtils' (~/miniconda3/envs/binning/lib/python3.10/site-packages/Bio/SeqUtils/__init__.py)

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