max seq len

[Ben]

Hi,

Is it possible to control the minimum contig/scaffold length created by SOAPdenovo-Trans? I'd like to create assemblies with contigs only 200bp in length or greater, without having to process them afterwards to remove short contigs. 

thanks

Ben

[谢寅龙(Long Xie)]

No such process in the assembler. You have to do it after the assembly.

Best,

Yinlong Xie

BGI

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Sent: Tuesday, June 09, 2015 17:30
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Subject: [BGI-SOAP:1187] max seq len

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