ICBO 2025 Call For Papers [2nd call]

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Asiyah Yu Lin

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Jul 16, 2025, 10:28:09 AMJul 16
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Dear communities,

This is the 2nd call for submissions for the 16th International Conference on Biomedical Ontology (ICBO 2025), to be held on November 9-11, 2025 as a fully virtual open conference.

Please note that the workshop proposal submission is now closed. The list of accepted workshops can be found on our website. The journal-track submission deadline (by July 31, 2025) is approaching. 

See detailed info below or on  ICBO2025 website:

Theme of Conference

Biological and Biomedical Ontologies in Action for Health, Science, and Sustainability

Important Dates

  • Conference Dates:
    • Workshops/tutorials: TBD
    • Main conference: November 7th to November 9th (11/7/2025-11/9/2025)
    • ICBO-EAST Satellite: November 1st (11/1/2025)

  • Submission Dates:
    • Workshops and Tutorial Proposal submission deadlineJune 30th (6/30/2025) July 7th (7/7/2025)
      • acceptance: July 15th (7/15/2025)
    • Direct-to-Journal Track submission deadline: July 31st (7/31/2025)
      • acceptance: October 1st (10/1/2025)
    • Main Conference submission deadline: August 17th (8/17/2025)
      • acceptance: September 15th (9/15/2025)
    • East Satellite submission deadline: August 24th (8/24/2025)
      • acceptance: September 17th (9/17/2025)

Call for ICBO Conference Papers

Submission deadline: August 17th, 2025. Notification: September 15th, 2025

The following paper categories are welcome:

More information can be found here

Call for Direct-to-Journal Track Papers

Direct-to-journal track submission deadline: July 31st, 2025. Notification: October 1st, 2025

  • In collaboration with the Journal of Biomedical Semantics (JBMS)
  • Papers submitted to the International Conference on Biomedical Ontologies track at the Journal of Biomedical Semantics will be published immediately after acceptance and presented in the annual conference following acceptance.
  • More information can be found here
  • Submission link:  https://jbiomedsem.biomedcentral.com/articles/collections/icboseries

Setting

The 16th International Conference of Biomedical Ontology (ICBO 2025) will be held virtually over Zoom.

Topics of Interest

We are interested in all topics related to ontologies and knowledge representation in biomedicine, biology, and life sciences. Topics include but are not limited to:

- Methodologies and Tools

  • Novel biomedical ontologies and extensions of existing ontologies, as well as graph databases, knowledge graphs

  • Ontology Engineering: Methodologies, techniques and practices, composition, modularity, evaluation, and validation

  • Ontology standards, design patterns, mapping and alignment

  • Ontology tools: visualization, building, reasoning, evaluation, knowledge discovery

  • Ontology governance, sustainability, and FAIR data principles

  • Applications of bio-ontologies in data management and biocuration, data integration and interoperability, machine learning, artificial intelligence, decision support systems

  • Natural Language Processing (NLP) and ontologies, text mining, specifically LLM and its applications in ontology development

  • Semantic Web and SemWeb technology: Modeling and Information retrieval ontology-based, Linked open data (LOD) applications

- Scientific Domains 

  • Health Informatics and the role of ontologies

  • Public and population health and global health

  • Mental health and wellness

  • Traditional medicine (e.g. Chinese medicine), integrative, and alternative medicine

  • Genetics, biochemistry, phenotypes, and diseases

  • Oral and dental health

  • Plant, veterinary, and agricultural applications

  • Food and Nutrition related

  • Environmental related

  • Human physical activity, kinesiology, and human performance

  • Industrial applications of ontology (e.g. pharmaceutical and food industries)

  • Bioethics and legal health

(all biomedicine, biological, and life sciences related domains are welcome)


Advisory Board

Bjoern Peters (La Jolla Institute)

Chris Mungall (Lawrence Berkeley National Laboratory)

Barry Smith (University at Buffalo, NCOR)

Co-Chairs

Asiyah Yu Lin (OntoData Research and Solutions, LLC.)

Mattew Lange (IC-FOODS.org)

Organizer Team Members 


Contact Information

Please direct all further questions to Asiya Yu Lin (ontolog...@gmail.com)


Sincerely yours,

Asiyah Lin on behalf of the ICBO 2025 organizer team



On Thu, Jul 3, 2025 at 3:07 PM Asiyah Yu Lin <lini...@gmail.com> wrote:

Dear colleagues,

This is the first call for submissions for the 16th International Conference on Biomedical Ontology (ICBO 2025), to be held on November 7-9, 2025 as a fully virtual open conference.
 

Theme of Conference

Biological and Biomedical Ontologies in Action for Health, Science, and Sustainability

Important Dates

  • Conference Dates:
    • Workshops/tutorials: TBD
    • Main conference: November 7th to November 9th (11/7/2025-11/9/2025)
    • ICBO-EAST Satellite: November 1st (11/1/2025)

  • Submission Dates:
    • Workshops and Tutorial Proposal submission deadlineJune 30th (6/30/2025) July 7th (7/7/2025)
      • acceptance: July 15th (7/15/2025)
    • Direct-to-Journal Track submission deadline: July 31st (7/31/2025)
      • acceptance: October 1st (10/1/2025)
    • Main Conference submission deadline: August 17th (8/17/2025)
      • acceptance: September 15th (9/15/2025)
    • East Satellite submission deadline: August 24th (8/24/2025)
      • acceptance: September 17th (9/17/2025)

Call for ICBO Conference Papers

Submission deadline: August 17th, 2025. Notification: September 15th, 2025

The following paper categories are welcome:

More information can be found here

Call for Direct-to-Journal Track Papers

Direct-to-journal track submission deadline: July 31st, 2025. Notification: October 1st, 2025

  • In collaboration with the Journal of Biomedical Semantics (JBMS)
  • Papers submitted to the International Conference on Biomedical Ontologies track at the Journal of Biomedical Semantics will be published immediately after acceptance and presented in the annual conference following acceptance.
  • More information can be found here
  • Submission link:  https://jbiomedsem.biomedcentral.com/articles/collections/icboseries

Setting

The 16th International Conference of Biomedical Ontology (ICBO 2025) will be held virtually over Zoom.

Topics of Interest

We are interested in all topics related to ontologies and knowledge representation in biomedicine, biology, and life sciences. Topics include but are not limited to:

- Methodologies and Tools

  • Novel biomedical ontologies and extensions of existing ontologies, as well as graph databases, knowledge graphs

  • Ontology Engineering: Methodologies, techniques and practices, composition, modularity, evaluation, and validation

  • Ontology standards, design patterns, mapping and alignment

  • Ontology tools: visualization, building, reasoning, evaluation, knowledge discovery

  • Ontology governance, sustainability, and FAIR data principles

  • Applications of bio-ontologies in data management and biocuration, data integration and interoperability, machine learning, artificial intelligence, decision support systems

  • Natural Language Processing (NLP) and ontologies, text mining, specifically LLM and its applications in ontology development

  • Semantic Web and SemWeb technology: Modeling and Information retrieval ontology-based, Linked open data (LOD) applications

- Scientific Domains 

  • Health Informatics and the role of ontologies

  • Public and population health and global health

  • Mental health and wellness

  • Traditional medicine (e.g. Chinese medicine), integrative, and alternative medicine

  • Genetics, biochemistry, phenotypes, and diseases

  • Oral and dental health

  • Plant, veterinary, and agricultural applications

  • Food and Nutrition related

  • Environmental related

  • Human physical activity, kinesiology, and human performance

  • Industrial applications of ontology (e.g. pharmaceutical and food industries)

  • Bioethics and legal health

(all biomedicine, biological, and life sciences related domains are welcome)


Advisory Board

Bjoern Peters (La Jolla Institute)

Chris Mungall (Lawrence Berkeley National Laboratory)

Barry Smith (University at Buffalo, NCOR)

Co-Chairs

Asiyah Yu Lin (OntoData Research and Solutions, LLC.)

Mattew Lange (IC-FOODS.org)

Organizer Team Members 


Contact Information

Please direct all further questions to Asiya Yu Lin (ontolog...@gmail.com)


Sincerely yours,

Asiyah Lin on behalf of the ICBO 2025 organizer team



Asiyah Yu Lin

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Aug 2, 2025, 3:54:59 PMAug 2
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Dear communities,

This is the 3rd call for submissions for the 16th International Conference on Biomedical Ontology (ICBO 2025), to be held on November 9-11, 2025 as a fully virtual open conference.

Please note that the journal-track submission deadline is extended to Sunday, August 10, 2025. The main Conference submission deadline is approaching. 

See detailed info below or on  ICBO2025 website:

Theme of Conference

Biological and Biomedical Ontologies in Action for Health, Science, and Sustainability

Important Dates

  • Conference Dates:
    • Workshops/tutorials: TBD
    • Main conference: November 7th to November 9th (11/7/2025-11/9/2025)
    • ICBO-EAST Satellite: November 1st (11/1/2025)

  • Submission Dates:
    • Direct-to-Journal Track submission deadline:   July 31th (7/31/2025)  August 10th (8/10/2025)
      • acceptance: October 1st (10/1/2025)
    • Main Conference submission deadline: August 17th (8/17/2025)
      • acceptance: September 15th (9/15/2025)
    • East Satellite submission deadline: August 24th (8/24/2025)
      • acceptance: September 17th (9/17/2025)

Call for ICBO Conference Papers

Submission deadline: August 17th, 2025. Notification: September 15th, 2025

The following paper categories are welcome:

More information can be found here

Call for Direct-to-Journal Track Papers

Direct-to-journal track submission deadline: August 10th, 2025. Notification: October 1st, 2025

  • In collaboration with the Journal of Biomedical Semantics (JBMS)
  • Papers submitted to the International Conference on Biomedical Ontologies track at the Journal of Biomedical Semantics will be published immediately after acceptance and presented in the annual conference following acceptance.
  • More information can be found here
  • Submission link:  https://jbiomedsem.biomedcentral.com/articles/collections/icboseries

Setting

The 16th International Conference of Biomedical Ontology (ICBO 2025) will be held virtually.

Asiyah Yu Lin

unread,
Aug 15, 2025, 5:01:05 PMAug 15
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Dear communities,

Reminder:
The ICBO 2025 Journal Track submission deadline is today.

The Main Conference submission deadline has been extended to August 31.

The Journal Track publishes in the Journal of Biomedical Semantics (JBMS), while the Main Conference track publishes in CEUR proceedings. If you can't make the Journal Track deadline, we encourage you to submit to the Main Conference.

The 16th International Conference on Biomedical Ontology (ICBO 2025) is a virtual conference held November 9-11, 2025.

Please see more details on  ICBO2025 website.

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