Bedtools scf/chr size limitations

[Heiner Kuhl]

Hi there,

I am running into problems with amphibian genomes that may have chromosome sizes above 1Gbp, which bedtools does not support by default. Could you give me hints how to compile a bedtools version, that supports very large scaffolds?

Thanks,

Heiner

[Aaron Quinlan]

Dear Heiner,

The latest version (2.30.0) of bedtools should be compatible with chromosomes this large.

Aaron

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