need help installing bedtools on mac os x

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tess.c...@gmail.com

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Jul 17, 2014, 9:43:00 PM7/17/14
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Hello,

I have been trying to install bedtools on my mac. I have the program downloaded but then when I enter the word "make" to instal the program, I get:

Last login: Thu Jul 17 20:35:16 on ttys000
Isabel-Manleys-MacBook:~ tesscherlin$ cd bedtools-2.17.0/
Isabel-Manleys-MacBook:bedtools-2.17.0 tesscherlin$ make
-bash: make: command not found
Isabel-Manleys-MacBook:bedtools-2.17.0 tesscherlin$ 

Is there another way of installing bedtools on a mac?

Thank you in advance! 

Carlos Borroto

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Jul 22, 2014, 9:23:52 AM7/22/14
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On Thursday, July 17, 2014, <tess.c...@gmail.com> wrote:
Hello,

I have been trying to install bedtools on my mac. I have the program downloaded but then when I enter the word "make" to instal the program, I get:


The easiest way would be to install Bedtools using Homebrew[1]. Once you get Homebrew installed(one line command), you should be able to install Bedtools using:
$ brew install bedtools


--Carlos

John Marshall

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Jul 23, 2014, 10:10:36 AM7/23/14
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On 18 Jul 2014, at 02:43, tess.c...@gmail.com wrote:
> I have been trying to install bedtools on my mac. I have the program downloaded but then when I enter the word "make" to instal the program, I get:
>
> Isabel-Manleys-MacBook:bedtools-2.17.0 tesscherlin$ make
> -bash: make: command not found

Your problem is likely that you do not have development tools installed on your mac. See http://stackoverflow.com/questions/14671021/bash-make-command-not-found

John


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