Hi,
I am learning to use the BREATH model in BEAST 2, I have completed the analysis running and successfully obtained the transmission network figure and the output of TransmissionTreeStats. I can understand the transmission network figure, but don't understand the output of the TransmissionTreeStats as follows:
average internal Branch Length = 1.12
average leaf transmission count = 1
average internal transmission count = 1
average transmission count per tree = 232
average unsampled hosts per tree = 116
average maximum block count = 1
Would some one who familiar with BREATH model help to explain the meaning of each item in the above results.
Best,
Jie