Likelihood component, branchRates, created but not used in the MCMC

63 views
Skip to first unread message

Sandy

unread,
Jul 5, 2017, 5:20:38 AM7/5/17
to beast-users
Hello everyone,

I am currently running a xml files in BEAST 1.8.4 (in CIPRES) which is repeatedly giving me the  following warning .
The file is running smoothly on a local machine ! but its stopping in between after few MCMC generations in CIPRES.

I am unable to fix this error! Please help
WARNING: Likelihood component, branchRates, created but not used in the MCMC

Andrew Rambaut

unread,
Jul 5, 2017, 5:22:48 AM7/5/17
to beast...@googlegroups.com
Hi,

This warning is not causing the issue (it can be safely ignored). Is there another error being shown on CIPRES?

Andrew


--
You received this message because you are subscribed to the Google Groups "beast-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to beast-users...@googlegroups.com.
To post to this group, send email to beast...@googlegroups.com.
Visit this group at https://groups.google.com/group/beast-users.
For more options, visit https://groups.google.com/d/optout.

Sandy

unread,
Jul 5, 2017, 5:29:30 AM7/5/17
to beast-users
No, but the run is interrupted after few generations! I checked the do not use BEAGLE option also.

Andrew Rambaut

unread,
Jul 5, 2017, 5:30:46 AM7/5/17
to beast...@googlegroups.com
Sounds like you need to contact the CIPRES people.

Andrew

Sandy

unread,
Jul 5, 2017, 5:52:42 AM7/5/17
to beast-users
Thanks  for the suggestion Andrew


On Wednesday, July 5, 2017 at 2:50:38 PM UTC+5:30, Sandy wrote:
Reply all
Reply to author
Forward
0 new messages