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Hi,
I am trying to fix a starting tree in BEAST 2 and have generated an XML from Beauti with the starting tree included in Newick format. I have also put the weight of the four priors linked to tree topology to 0. Weirdly Beast still seems to change some relationships in my tree even with these priors ignored. Is there something I have forgotten to do?
All the best,
Brett
kostis stamelos
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Feb 9, 2026, 1:21:45 PM (2 days ago) Feb 9
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Hi Brett,
I am having the same issue, even though I use a fixed tree and tried stting the operators weight at zero. Did you find a way in the end?