Re: java error

[william dunaway]

Does anyone know why I got this error and how to resolve it?

Thanks,
     Billy

On Mon, Mar 8, 2010 at 3:55 PM, Jim McGuire <mcgu...@calmail.berkeley.edu> wrote:

[jmcguire@n02 bin]$ ./beast draco290.xml

libgcj-java-placeholder.sh

This script is a placeholder for the /usr/bin/java

master link required by jpackage.org conventions.  libgcj's

rmiregistry, rmic and jar tools are now slave symlinks to these

masters, and are managed by the alternatives(8) system.

This change was necessary because the rmiregistry, rmic and jar tools

installed by previous versions of libgcj conflicted with symlinks

installed by jpackage.org JVM packages.

This script was designed to be overridden by the supported RHEL3 JRE

packages, java-1.4.2-bea and java-1.4.2-ibm.  It is installed as an

alternative symlink as /usr/bin/java.  It will override a third-party

(non-RHEL3) JRE's java command if the JRE's bin directory is listed

after /usr/bin in PATH.  In that case, it is recommended that the

third-party JRE's bin directory be listed first in PATH instead.

gij: unrecognized option -- `-Xms64m'

Try `gij --help' for more information.

[jmcguire@n02 bin]$ 

--
William Dunaway
Computer/Technical Support
Museum of Vertebrate Zoology
University of California Berkeley
PH: (510) 643-4699
wil...@berkeley.edu

[Andrew Rambaut]

Hi Billy,

This looks like you don't have the Sun Java virtual machine installed. The messages below mention gcj which is an open source VM and is not BEAST compatible.

http://java.sun.com/javase/downloads/index.jsp

Best,
Andrew

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___________________________________________________________________
Andrew Rambaut
Institute of Evolutionary Biology University of Edinburgh
Ashworth Laboratories Edinburgh EH9 3JT
EMAIL - a.ra...@ed.ac.uk TEL - +44 131 6508624

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