Problem with BEAUTI generated XML input for *BEAST

[griffinia]

I am trying to to do a *BEAST (v. 1.71) analysis with six nuclear
loci. A single species tree has been provided as a starting tree for
all six partitions. The input file was prepared using BEAUTI 1.71

I get the following error message:
"Parsing error - poorly formed BEAST file, StarBEASTspiny10M.xml:
Object with idref=W12spiny47OTU.treeLikelihood has not been previously
declared."

I did not receive any warnings from within BEAUTI when I saved the
file. I don't understand why this error is occurring or how to
correct it. Any help will be appreciated.

Thanks,
Alan

Here is my input XML file:

<?xml version="1.0" standalone="yes"?>

<!-- Generated by BEAUTi
v1.7.1 -->
<!-- by Alexei J. Drummond, Andrew Rambaut and Marc A.
Suchard -->
<!-- Department of Computer Science, University of Auckland
and -->
<!-- Institute of Evolutionary Biology, University of
Edinburgh -->
<!-- David Geffen School of Medicine, University of California,
Los Angeles-->
<!-- http://beast.bio.ed.ac.uk/
-->
<beast>

<!-- The list of taxa to be analysed (can also include dates/
ages). -->
<!--
ntax=47
-->
<taxa id="taxa">
<taxon id="Acrocomia_aculeata_PL75"/>
<taxon id="Acrocomia_aculeata_PL76"/>
<taxon id="Acrocomia_aculeata_PL77"/>
<taxon id="Acrocomia_crispa_PL116"/>
<taxon id="Acrocomia_intumescens_PL78"/>
<taxon id="Aiphanes_horrida_PL112"/>
<taxon id="Aiphanes_minima_PL111"/>
<taxon id="Aiphanes_ulei_PL107"/>
<taxon id="Astrocaryum_alatum_PL102"/>
<taxon id="Astrocaryum_alatum_PL95"/>
<taxon id="Astrocaryum_mexicanum_PL104"/>
<taxon id="Astrocaryum_mexicanum_PL85"/>
<taxon id="Astrocaryum_mexicanum_PL86"/>
<taxon id="Astrocaryum_murumuru_PL108"/>
<taxon id="Astrocaryum_murumuru_PL94"/>
<taxon id="Astrocaryum_sp_PL96"/>
<taxon id="Astrocaryum_sp_PL97"/>
<taxon id="Astrocaryum_standleyanum_PL101"/>
<taxon id="Astrocaryum_standleyanum_PL117"/>
<taxon id="Attalea_crassispatha_PL21"/>
<taxon id="Bactris_brongniartii_PL83"/>
<taxon id="Bactris_cf_maraja_PL113"/>
<taxon id="Bactris_coloniata_PL98"/>
<taxon id="Bactris_concinna_PL106"/>
<taxon id="Bactris_gasipaes_PL92"/>
<taxon id="Bactris_gasipaes_PL93"/>
<taxon id="Bactris_major_PL114"/>
<taxon id="Bactris_mexicana_PL88"/>
<taxon id="Bactris_militaris_PL109"/>
<taxon id="Bactris_plumeriana_PL99"/>
<taxon id="Bactris_sp_PL80"/>
<taxon id="Barcella_odora_PL121"/>
<taxon id="Beccariophoenix_madagascariensis_PL47"/>
<taxon id="Cocos_nucifera"/>
<taxon id="Desmoncus_orthacanthos_PL100"/>
<taxon id="Desmoncus_polyacanthos_PL90"/>
<taxon id="Desmoncus_polyacanthos_var_prunifer_PL115"/>
<taxon id="Elaeis_guineensis_PL124"/>
<taxon id="Elaeis_oleifera_PL110"/>
<taxon id="Elaeis_oleifera_PL87"/>
<taxon id="Jubaea_chilensis_PL62"/>
<taxon id="Parajubaea_torallyi_PL64"/>
<taxon id="Reinhardtia_gracilis_var_rostrata_PL119"/>
<taxon id="Reinhardtia_latisecta_PL120"/>
<taxon id="Roystonea_borinquena_PL122"/>
<taxon id="Roystonea_oleracea_PL123"/>
<taxon id="Syagrus_romanzoffiana_PL27"/>
</taxa>

<!-- The sequence alignment (each sequence refers to a taxon
above). -->
<!-- ntax=47
nchar=830 -->
<alignment id="alignment1" dataType="nucleotide">
<sequence>
<taxon idref="Acrocomia_aculeata_PL75"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCATTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCCACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCGGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-CTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATACGGGCAAAAAGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CTGTTATGCTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAG
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL76"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCATTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCCACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCGGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-CTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATACGGGCAAAAAGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CTGTTATGCTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAG
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL77"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCATTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCCACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCGGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-CTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATACGGGCAAAAAGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CTGTTATGCTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAG
</sequence>
<sequence>
<taxon idref="Acrocomia_crispa_PL116"/>
-----CACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCTGTTATGGGCAAGC-
ACACACAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCAAAAAGAAGGTTAATATTYTTTAGCTTCTTAAWGATAAMTTATAATTAGTGAGCTT-
GGAAAWTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-
ATTGTTTTGTACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGSTGCTTCTAGACCTGTTYGTAAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATYCAAGGTATGSTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCCTGACTATTGTAAGCATTCTGCAGCCAATGTGCTCATATCTACTTGGTAATCTAA-
CAGCTATGCTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Acrocomia_intumescens_PL78"/>
----------------TGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCATTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCCACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCGGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-CTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATACGGGCAAAAAGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CTGTTATGCTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAG
</sequence>
<sequence>
<taxon idref="Aiphanes_horrida_PL112"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCCTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAGTTCTGTGATCCATCAACATCCATGCAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGTGTCTCGCTGGGTTGT-
GATGGTGAGGGAGACGAGACAGAGTCGAAAAGAAGGTTAATATTGTTGAGCTTCATGATGATAACTTCTAATTAGTGAGTTT-
AGAAATTAATTTGT-TTAAGCTAGCTATGGCTGTAGGGT----ATGCAGCATTT-ATTGTTT-G-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGGTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCGATTG----------TTGAAGAAGTCC-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Aiphanes_minima_PL111"/>
----------------TGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCCTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAGTTCTGTGATCCATCAACATCCATGCAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGYGTCTCGCTGGGTTGT-
GATGGTGAGGGAGACGAGACAGAGTCRAAAAGAAGGTTAATATTGTTGAGCTTCATGATGATAACTTCTAATTAGTGAGTTT-
AGAAATTAATTTGT-TTAAGCTAGCTATGGCTGTAGGGT----ATGYAGCATTT-ATTG-TTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGGTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCGATTG----------TTGAAGAAGTCN-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Aiphanes_ulei_PL107"/>
---------------------------------------------------------------------
GGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAGTTCTGTGATCCATCAACATCCATGCAGACACAAGATGGGCCTCGAT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGACGAGACAGAGTCGAAAAGAAGGTTAATATAGTTGAGCTTCATAATGATAACTTCTAATTAGTGAGTTT-
AGAAATTAATTTGT-TTAAGCTAGCTATGGCTGTAGGGT----ATGCAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGACATTCATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTAT-------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL102"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGTTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAAATAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTCAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGATGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL95"/>
CTT-CCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGG-------------
TTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATTACTTCTAATTAGTGAGTTT-
GGAAAATAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTCAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGATGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL104"/>
-----CACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGTTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATTACTTCTAATTAGTGAGTTT-
GGAAAATAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACMGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTCAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGATGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL85"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGTTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCGGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATTACTTCTAATTAGTGAGTTT-
GGAAAATAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTCAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGATGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL86"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGTTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCRGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATTACTTCTAATTAGTGAGTTT-
GGAAAATAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTCAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGATGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL108"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGTCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTGTGGGCAAGC-
ACACAGAATGGAACTGGAGGCCATGAATGGCGAGGTGATGGCCAGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGAAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTTGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGTGTATGTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGCGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCAATAATATTCAGTAATGCTTCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL94"/>
-----CACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGT--------
GCAAGCTTTGAAGGCAAGCCGTTGTGGGCAAGC-
ACACAGAATGGAACTGGAGGCCATGAATGGCGAGGTGATGGCCAGGAGGCATCGTCATCAKCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATARATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGAAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTTGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGTGTATGTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGCGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCAATAATATTCAGTAATGYTTYTGACCATTGTAAGCATTYTGCAGCCAATGTGCTSTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL96"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACATCCTGTCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTGTGGGCAAGC-
ACACAGAATGGAACTGGAGGCCATGAATGGCGAGGTGATGGCCAGGAGGCATCATCATCAGCYACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGAAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTTGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAAGGTGTATGTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCAATAATATTCAGTAATGCTTCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAARAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL97"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGTCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTGTGGGCAAGC-
ACACAGAATGGAACTGGAGGCCATGAATGGCGAGGTGATGGCCAGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGAAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTTGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGTGTATGTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGCGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCAATAATATTCAGTAATGCTTCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL101"/>
-TTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGTCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTGTGGGCAAGC-
ACACAGAATGGAACTGGAGGCCATGAATGGCGAGGTGATGGCCAGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGAAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTTGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGTGTATGTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGATATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCAATAATATTCAGTAATGCTTCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL117"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGTCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTGTGGGCAAGC-
ACACAGAATGGAACTGGAGGCCATGAATGGCGAGGTGATGGCCAGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACGTCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCGGGCAACTCATGGAAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTTGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGTGTATGTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACATAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGATATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCAATAATATTCAGTAATGCTTCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Attalea_crassispatha_PL21"/>
----------------------------------------------------------
CAAGCTTTGAAGGCAAGCCGTTATGGGCAAGCCACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCAAAAAGAAGGTTAACATTCTTTAGCTTCTTAATGATAACTTCTAACTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTTGCTATGGCTTTAGGGT----CTACACCATTT-ATTGTTTTG-
ATCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAAGTGGTCAAAGGAAATCCAAATCCAAGGTAGGTTGTGG----
CATTATAAACAAAAATCTTTCCATAATATTGAGTAATGCTCCTGACTGTTGTAAGCATTCTGCAGCCAA--
TGCGCTTATCTACTTGGTAATCTAAACAGTTATACTAGCTTTTGTTCAATTG----------
TTGAA--------------------------------------
</sequence>
<sequence>
<taxon idref="Bactris_brongniartii_PL83"/>
----------------TGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGCGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGTGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGAGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGAGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAGGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Bactris_cf_maraja_PL113"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTCATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGCGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGGGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGAGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGAGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAGGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAGGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Bactris_coloniata_PL98"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGCGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGAGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGAGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAGGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAGGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Bactris_concinna_PL106"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGCGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGAGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGAGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAGGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAGGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL92"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAGGCTTTGAAGGCAAG-----AT-------C-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGTGTCT-
GGAAATTAATTTGT-TTAAGTTGGCTCTGGCTTTGGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTATTTGGTAATCTAA-
CAGTTATACTCGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAGGACATGAATGAT
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL93"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAGGCTTTGAAGGCAAG-----AT-------C-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGTGTCT-
GGAAATTAATTTGT-TTAAGTTGGCTCTGGCTTTGGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTATTTGGTAATCTAA-
CAGTTATACTCGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAGGACATGAATGAT
</sequence>
<sequence>
<taxon idref="Bactris_major_PL114"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGCGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGAGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGAGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTKGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAGGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAGGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Bactris_mexicana_PL88"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTTGCT-
CACAGGCAGGCGTTGAAGGCAAGCCGTTATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATYGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGTGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTCGCTTTTGTTCAA------------------GAAGTCA-
TAAAGAAGTATATACTAGGATATGAATGAT
</sequence>
<sequence>
<taxon idref="Bactris_militaris_PL109"/>
----------------TGATCCACAGATTGATGGTTCAGAACAGCCTTGCT-
CACAGGCAAGCGTTGAAGGCAAGACGTTATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATCGCCTGGAGGCATCATCATCGGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGGTGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGTGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTCGCTTTTGTTC------------------AAGAAGTCA-
TAAAGAAGTATATACTAGGATATGAATGAT
</sequence>
<sequence>
<taxon idref="Bactris_plumeriana_PL99"/>
CTTCCCAACCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCTGTTATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGTGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGAGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGGGGT----GTCCAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTCGCTTTTGTTCAATTG----------TTGAAGAAGCCA-
TAAAGAAGTATATACTAGGATATGAATGAG
</sequence>
<sequence>
<taxon idref="Bactris_sp_PL80"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACGCAGAATGGAACTGGAGGCCAAGAATGGCGAGGCGATCGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTGATGATAACTTCTAATTAGTGAGTCT-
GGAAATTAATTTGT-TTAAGTTAGCTATGGCTTTGAGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTGGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAGGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTGAGTAATGCTCATGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACTTGCTTTTGTTCAATTG----------TTGAAGAAGTCA-
TAAAGAAGTATATACTAGGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Barcella_odora_PL121"/>
-----CACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCAAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCAAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTCT-TTAAGCTTGYTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCAGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAGGTGGTGAAAGGAAATCCAAATCCAAGGTAAGTTGTGA----
CATTATAAAT--AAATGTGCCCATAATATTGAGTAATGCTCCTGAGCATTGTAAGCATTTTGCAGCCAA--
TGCTCTTATCTACTTAGTAATCTAA-CA-TTATACTTGCTTTTGTTCAATTG----------
TTGAAGAAGTCA-TAAAGAAGTATGTACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Beccariophoenix_madagascariensis_PL47"/>
-----------------------------------------------------------------------------------------------
AGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAACATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TGAAGCTTGCTATGGCTTTAGGGT----CTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAAGTGGTCAAAGGAAATCCAAATCCAAGGTATGTTGTGG----
CATTATAAATAAAAATCTTTCCATAATATTGAGTAATGCTCCTGACTGTTGTAAGCATTCTGCAGCCAA--
TGCTCTTATCTACTTGGTAATCTAA-CAATTATACTTGCTTTTGTTCAATTG----------
TTGAAGAAG----------------------------------
</sequence>
<sequence>
<taxon idref="Cocos_nucifera"/>
---------------------------TTGATGGTTCAGAGCAGCCT-TC-
CCACAGGCAAGCTTTGATCGCAAGCCCTTATGGGCAACC-ACCCCCAATGGA-CTG-
AGGCCACGAATGGCAAGGTGATGGCCTGGAGGCATCGTCATCATCTACCGT-
GCTGCTGAATTCTGCGACCCATCAACATCCATACAGACACAAGATGGGCCTC-
CTCTTGCATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAACGATGAAGA---
GGATGATCAGGCAACTCCTGGCAGCATCTCGCTCGGTTGTCGATGGTGAGGGAGATGAGACAGAGTCAAAAAGAAGGTTAACATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTTTGGAAATTAATTTGTGTCAAGCTTGCTATGGCTTTAGGGT----
CTACAGCATTT-ATGGTTTTG-
ACCTTTTTTGACTTAGGACAGCTTGATGCTTGTGCAATTGAAATGATTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGGCTCGTGGTTCAGACAATCAAGTGAGGTTGACATCCTTGATGATGGACTATCGTTGGCGCAAATATGGACAAAAAGTGGTCACAGGAAATCCTAATCCAAGGTATGTTCTGG----
CATTATAAACAAAAATCTTTCCATAATAGTGAGTAATGCACCTGACTGTTGTCCGCATTCTGCAGCCAA--
TGCTCTTATCTACTTGGCAATCTAA-CAGTTATACGTGCTTTTGGTCAATTA-----------TGA-
GAAGTCC-T-----------------------------
</sequence>
<sequence>
<taxon idref="Desmoncus_orthacanthos_PL100"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCATTATGGGCAAGC-
ACACAGAAYGGAACTAGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCCGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTTTATCCAATGATGAAGAAGAGGATGATCGGGCAACTCATGGCAGTGTCTCGCTGGGCTGT-
GAKGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACCTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTTTATTGTTTTG-
ACCTTTTTTGGCTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTGGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGTTGTGA----
CATTATAAAT--
AAATCTGCGCGTAATATTGAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGCTCTTATCTACTTGGTAATCTAA-
CAGTTATACATGCTTTTGTTCAATTG----------
TTGAATAAGTCATAAAGCAGTGTATACCAAGATATGAATGAAT
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_PL90"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCATTATGGGCAAGC-
ACACAGAATGGAACTAGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCCGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTTTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCAAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTTTATTGTTTTG-
ACCTTTTGTGGCTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTGGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATAYGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTAAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGTTCTTATCTACTTGGTAATCTAA-
CAGTTATACATGCTTTTGTTCAATTG----------TTGAATAAGTCA-
TAAAGCAGTGTATACCAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_var_prunifer_PL115"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCATTATGGGCAAGC-
ACACAGAATGGAACTAGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCCGAATTCTGTGATCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTTTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGAYGAGACAGAGTCAAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTAGCTATGGCTTTAGGGT----GTACAGCATTTTATTGTTTTG-
ACCTTTTGTGGCTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TTGTGGTTCAGACAA-CAAGTGAGGTGGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGGCAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCTGTGA----
CATTATAAAT--
AAATCTGCCCATAATATTAAGTAATGCTCCTGACCATTGTAAGCATTCTGCAGCCAATGTGTTCTTATCTACTTGGTAATCTAA-
CAGTTATACATGCTTTTGTTCAATTG----------TTGAATAAGTCA-
TAAAGCAGTGTATACCAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Elaeis_guineensis_PL124"/>
----CCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGNGATGGCCTGGAGGCATCGTCATCAGCTACCATTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTTGCTATGGCTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGCGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAGGTGGTGAAAGGAAATCCAAATCCAAGGTACGTTGTGA----
CATTATAAAT--AAATCTGCCCATAATATTGAGTAATGCTCCTGAGCATTGTAAGCATTCTGCANCCAA--
TGCTCTTATCTACTTAGTAATCTAA-
CA-----------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL110"/>
-------------CAATGATCCACAGATTGATGGTTCAGAACAGCCTGG---------
CAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACCATTGTTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCATCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTTGCTATGACTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTGGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAGGTAGTGAAAGGAAATCCAAATCCAAGGTACGTTGTGA----
CATTATAAAT--AAATCTGCCCATAATATTGAGTAATGCTCCTGAGCATTGTAAGCATTCTGCAGCCAA--
TGCTCTTATCTACTTAGTAATCTAA-CAGTTATACTTGCTTTTGTTCAATTG----------
TTGAAGAAGTCA-TAAGGAAGTATGTACTAAGATATGAA----
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL87"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACCATTGTTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCATCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTTGCTATGACTTTAGGGT----GTACAGCATTT-ATTGTTTTG-
ACCTTTTTGGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAGGTAGTGAAAGGAAATCCAAATCCAAGGTACGTTGTGA----
CATTATAAAT--AAATCTGCCCATAATATTGAGTAATGCTCCTGAGCATTGTAAGCATTCTGCAGCCAA--
TGCTCTTATCTACTTAGTAATCTAA-CAGTTATACTTGCTTTTGTTCAATTG----------
TTGAAGAAGTCA-TAAGGAAGTATGTACTAAGATATGAATGAT
</sequence>
<sequence>
<taxon idref="Jubaea_chilensis_PL62"/>
--------------------------------------------------------------
CTTTGAAGGCAAGCCGTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCCGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCGGGCAACTCATGGCAGCATCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCAAAAAGAAGGTTAACATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTTGCTATGGCTTTAGGGT----CTACAGCGTTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAAGTGGTCAAAGGAAATCCAAATCCAAGGTATGTTGTGG----
CATTATAAATAAAAATCTTTCCATAATATTGAGTAACGCTCCTGACTGCTGTAAGCATTCTGCAGCCAA--
TGCTCTTATCTACTTGGTAATCTAA-CAGTTATACTTGCTTTTGTTCAATTG----------
TTGAAGAACTCATTAAAGA------------------------
</sequence>
<sequence>
<taxon idref="Parajubaea_torallyi_PL64"/>
---------------------------------------------CTGGCTC-
ACAGGCAAGCTTTGAAGGCAAGCCATTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCAGCTACTGTTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCATCTCACTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCAAAAAGAAGGTTAACATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTTGCTATGGCTTTAGGGT----CTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAAGTGGTAAAAGGAAATCCAAATCCAAGGTATGTTGTGG----
CATCATAAATA-AAATCTTTCCATAATATTGAGTAATGCTCCTGACYGCTGTAAGCATTCTGTAGCCAA--
TGCTCTTATCTACTTGGTAATCCAA-CAGTTATACTTGCTTTTGTTCAATTG----------
TTGAAGAAGTCA-TAAAGAAGATTATA----------------
</sequence>
<sequence>
<taxon idref="Reinhardtia_gracilis_var_rostrata_PL119"/>
-----CACCCATTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CACAGGCAAGCTTTGAAGGCAAGCCCTTATGGGCAAGC-
GCACAGAATGGAACTGGAGGCCTGGAATGGCGAGGTGATGGCCTGGAGGCATCATCATCTGCCACTGTTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCGTGTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCGAAAAAAAGGTTTATATTTTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTCT-TT-----------AGCTTTAGGGT----GCACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATACTAGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGATTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAGAAGGTGGTCAAAGGAAATCCGAATCCAAGGTATGTTGTGA----
CATTATAAAT--AAATCTTCCCATAATATTGAGTGTTGCTCCTGACCATTGTAAGCATTCTGCAGCCAA--
TGCTTTTATCTACTT---------------------------
TGTTGATGCTGACCAAATGGTTGAAGAAGTCA-TAAAGAAGTATATACTAAGACATGAA----
</sequence>
<sequence>
<taxon idref="Reinhardtia_latisecta_PL120"/>
CTTCC-ACCCGTTCAATGATCCACAGATTGATGGTTCAGAACAGCCTGGCT-
CGCAGGCAAGCTTTGAAGGCAAGCCCTTATGGGCAAGT-
GCACAGAATGGAACTGGAGGACAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCCGTCACTGTTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAGGAGGATGATCAGGCAACTCATGGCAGTGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAGACAGAGTCAAAAAGAAGGTTAATATTCTTTAGTTTCTTAATGATAACTTCTAATTAGTGAGTTA-
GTAAATTAATTTGT-TTAAGCTTGCTATGGCTT-AGGGT----GCACAGCTTTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTCCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGCCATGA----
CATTATAAAT--AAATCTGTCCGTAATATTGAGTAATGCTCCTGACCATTGTAAGCTTTCTGTAGCCAA--
TGCTCTTGTCTACTTAGTAATCTAA-
CAGTTATACTTGCTTTTGTTCATGTTGACCAACTGGTTGAAGAAATCA-
TAAAGAAGTATATACCAAGATATGAGTGAA
</sequence>
<sequence>
<taxon idref="Roystonea_borinquena_PL122"/>
CTTCCCACCCATTCAATGATCCACAGATTGATGGTTCGGAACAGCCTGGCT-
CACAGGCATGCTTTGAAGGCAAGCCCTTATGGGCAAGC-
ACACAGAATGGAACAGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCTGCCACTGTTGCTGCTGAATTCTGTGACCCAACAACATCCATACAGGCACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCGACTCATGGCAGTGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAAACAGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACCTCTAATTAGTGAGTTT-
GGAAA--------T-TTAAGCTTGCTATGGCTT-AGGGT----GCGCAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTCGATGCTTGTGCGATTGAATTGAGTGCTGCTTCTAGAGCTGTCCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTCGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGTTGTGA----
CATCATAAAT--AAATCTGCCCAT--TATTGAGTAATGCTCCTGACAGTTGTAAGCTTTCTGCAGCCAA--
TGCTCTTATCTACTTGGTTATCTGA-
CAGTTACACTTGCTTTTGTTCATGTTGACCCCATGGTTGAAGAAGTGA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Roystonea_oleracea_PL123"/>
-----CACCCATTCAATGATCCACAGATTGATGGTTCGGAACAGCCTGGCT-
CACAGGCATGCTTTGAAGGCAAGCCCTTATGGGCAAGC-
ACACAGAATGGAACAGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCGTCATCTGCCACTGTTGCTGCTGAATTCTGTGACCCAACAACATCCATACAGGCACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCCATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCGACTCATGGCAGTGTCTCGCTGGGTTGT-
GATGGTGAGGGAGATGAAACGGAGTCGAAAAGAAGGTTAATATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAA--------T-TTAAGCTTGCTATGGCTT-AGGGT----GCGCAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCGATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTCGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAGGTGGTCAAAGGAAATCCAAATCCAAGGTATGTTGTGA----
CATCATAAAT--AAATCTGCCCAT--TATTGAGTAATGCTCCTGACAGTTGTAAGCTTTCTGCAGCCAA--
TGCTCTTATCTACTTGGTTATCTGA-
CAGTTACACTTGCTTTTGTTCATGTTGACCCCATGGTTGAAGAAGTCA-
TAAAGAAGTATATACTAAGATATGAATGAA
</sequence>
<sequence>
<taxon idref="Syagrus_romanzoffiana_PL27"/>
---------CCGTCAATGATCCACAG-ATGATGGT-
CAGAACAGCCTGGCTCCACAGGCAAGCTTTGAAGGCAAGCCTTTATGGGCAAGC-
ACACAGAATGGAACTGGAGGCCAAGAATGGCGAGGTGATGGCCTGGAGGCATCATCATCAGCTACTGTTGCTGCTGAATTCTGTGACCCATCAACATCCATACAGACACAAGATGGGCCTCGCT-
TTGAATCCCAAGATGCTATAGATGTTTCATCCACTCTATCCAATGATGAAGAAGAGGATGATCAGGCAACTCATGGCAGCATCTCGCTGGGGTGT-
GATGGTGAGGGAGATGAGACAGAGTCAAAAAGAAGGTTAACATTCTTTAGCTTCTTAATGATAACTTCTAATTAGTGAGTTT-
GGAAATTAATTTGT-TTAAGCTTGCTATGGCTTTAGGGT----CTACAGCATTT-ATTGTTTTG-
ACCTTTTTTGACTTAGGA-
AGCTTGATGCTTGTGCAATTGAAATGAGTGCTGCTTCTAGAGCTGTTCGTGAACCAAGGG-
TCGTGGTTCAGACAA-CAAGTGAGGTTGACATCCTTGATGATGG-
GTATCGTTGGCGCAAATATGGACAAAAAGTGGTCAAAGGAAATCCAAATCCAAGGTATGTTGTGG----
CATTATAAACA-AAATCTTTCCATAGTATTGAGTAATGCTCCTGACTGTTGTCAGCATTCTGCAGCCAA--
TGCTCTTATCTACTTGGTAATCTAA-CAGTTATACTTGCTTTTGTTCAATTG----------
TTGAAGAAGTC--------------------------------
</sequence>
</alignment>

<!-- The sequence alignment (each sequence refers to a taxon
above). -->
<!-- ntax=47
nchar=1064 -->
<alignment id="alignment2" dataType="nucleotide">
<sequence>
<taxon idref="Acrocomia_aculeata_PL75"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTGAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTATTATATGAACTTTTCCAT----
TTTTCTATTATACTGTTACTGGTTCTGTTACTTTTT-GGA-------
TTTTTTTTATTAAAGAGCTTTTTCACTTTATGAAGATCTGTCATGTCGTACCCT---TC----CCATT--
GGGACCGGCCGC----TATTCTTCCATGAAC----------GTATC--
AGAGATATTCTTGTGCAT------------------TATATACAGACTTGTCCA----AACAAT----
GAAACAACAA-------ATATTTACCCGAAC----ATCGAAGTAAA-----------
ACAAGATGCAAAATAGTGAG--GAACCA----GAAATAAATTAATTC--TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL76"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTGAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTATTATATGAACTTTTCCAT----
TTTTCTATTATACTGTTACTGGTTCTGTTACTTTTT-GGA-------
TTTTTTTTATTAAAGAGCTTTTTCACTTTATGAAGATCTGTCATGTCGTACCCT---TC----CCATT--
GGGACCGGCCGC----TATTCTTCCATGAAC----------GTATC--
AGAGATATTCTTGTGCAT------------------TATATACAGACTTGTCCA----AACAAT----
GAAACAACAA-------ATATTTACCCGAAC----ATCGAAGTAAA-----------
ACAAGATGCAAAATAGTGAG--GAACCA----GAAATAAATTAATTC--TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL77"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATCTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGATAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGTTACTGGTTCTGTTACTTTTT-GGA--------
TTTTTTTATTAAAGAGCTTTTTCACTTTATGAAGATCTGTCATGTCGTACCCT---TC----CCATT--
GGGACCGGCCGC----TATTCTTCCATGAAC----------GTATC--
AGAGATATTCTTGTGCAT------------------TATATACAGACTTGTCCA----AACAAT----
GAAACAACAA-------ATATTTACCCGAAC----ATCGAAATAAA-----------
ACAAGATGCAAAATAGTGAG--GAACCA----GAAATAAATTAATTC--TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Acrocomia_crispa_PL116"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTATTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGGTGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTGT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGTGGTCATG-
CTTATGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGTTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTCACTTTATGAAGATCTGTCATGTCGTACCCT---CC----CCATT--GGGGCCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATACAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTACACGAAC----
ATCGAAGTAAA-----------ACAAGATGCAAAATAGTGAG--GAACCA----GAAATAAATTAATTC--
TTCTAAAGCAT
</sequence>
<sequence>
<taxon idref="Acrocomia_intumescens_PL78"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGATAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGTTACTGGTTCTGTTACTTTTT-GGA-------
TTTTTTTTATTAAAGAGCTTTTTCACTTTATGAAGATCTGTCATGTCGTACCCT---TC----CCATT--
GGGACCGGCCGC----TATTCTTCCATGAAC----------GTATC--
AGAGATATTCTTGTGCAT------------------TATATACAGACTTGTCCA----AACAAT----
GAAACAACAA-------ATATTTACCCGAAC----ATCGAAGTAAA-----------
ACAAGATGCAAAATAGTGAG--GAACCA----GAAATAAATTAATTC--TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Aiphanes_horrida_PL112"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG-TTTCTCTCG----CTTGTTGCCAGTT--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGGTAC--ATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AACTCTAGCTAT--TATGAACTTTTCCAA----
TTTTCTATTATACTGCTGCTGGTTCTGTTACTTTTTTGGA-TTTTTTTATTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GCGACCGGCCGC----
TATTCTTCCACGAGC----------GTATC--AGAGAGATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACGAT----GAAACAACAA-------ATATTTACCCGAAT----
ATCGAAGTAAA-----------ACAAGATGCCAAATAGTGAG--GAAACA----GAAATAAATTAATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Aiphanes_minima_PL111"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGACACAAG-TTTCTCTCG----CTTGTTGCCAGTT--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGGTAC--ATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AACTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTGCTGGTTCTGTTTCTTTTTTGGATTTTTTTTATTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGACCTGTCATGTCGTACCGT---TC----CCATT--GCGACCGGCCGC----
TATTCTTCCATGAGC----------GTATC--AGAGAGATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACGAT----AAAACAACAA-------ATATTTACCCGAAT----
ATCGAAGTAAA-----------ACAAGATGCCAAATAGTGAG--GAAACA----GAAATAAATTAATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Aiphanes_ulei_PL107"/>
------------------------------TTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAGTTTTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGGTAC--ATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCTGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGTGAGAGATCC-AACTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---TTTTTTTTWWTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGAGATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----MACGAT----GAAACMACAA-------ATATTTACCCGAAT----
ATCGAAGTAAA-----------
ACAATATGCCAAATAG--------------------------------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL102"/>
TCCAAGGTTTACCTGCTACATACAATGATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATAC--ATATTTCCTCTACGAATTATATATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATGTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--
TATGAACTTTTCCATTTAATTTTCTATTATACTGCTACTGGTTCTACTACTTTTT-GGA---------
TTTTTTATTAAAGAGC-TTTTAACTTTATGAAGATCTGTCATGTCGTGCCGT---TCCCGGCCATT--
GGGACCGGCCGC----TATTCTTCCATGAAC----------GTATC--
AGAGATATTCTTGTGTAT------------------TATATATAGACTTCTCCA----AACAAT----
GAAACAACAA-------ATATTTACCCGA-T----ATCGAAGTAAA-----------
ACAAGATGCAAAATAGTGAG--GGAACA----GAAATAAATTAATTCAATTATAAAGCAG
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL95"/>
TCCAAGGTTTACCTGCTACATACAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATAC--ATATTTCCTCTACGAATTATATATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATGTCAGTCTT----
AGCTCTT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTACTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTGCCGT---TCCCGGCCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGTAT------------------
TATATATAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTACCCGA-T----
ATCGAAGTAAA-----------ACAAGATGCAAAATAGTGAG--GGAACA----
GAAATAAATTAATTCAATTATAAAGCAG
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL104"/>
TCCAAGGTTTACTTGCTACTTATAACAATTATTTTTCTTTTC----AATATAATT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------CTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CATAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTCTTGACTTTTTAT---TT-------AAATGTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTACTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGAACTGTCATGTCGTGCTGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACAAT----GAAACAACAACAAATATTTAATTATTCGAAT----
ATCGAAGTAAA-----------ACAAGATGCAAAATAGTGAG--GGAACA----
GAAATAAATTAATTCAATTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL85"/>
------GTTTACTTGCTACCTACAATAATTAGTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATAT-TT-CCTCTACGAAT----TATATATCAGCATAT--------
CTTAAATGCCTGTAAAAAATTTCGTCT-GCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTACTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGAACTGTCATGTCGTGCTGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACTTCTCCAAA----CAAT----GAAACAACAA-------ATATTTATTCGAAT----
ATCGAAGTAAA-----------ACAAGATGCAAAATAGTGAG--GGAACA----
AAAATAAATTAATTCAATTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL86"/>
------GTTTACTTGCTACATACAATAATTAGTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACAT--ATTTCCTCTACGAATTATATATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTACTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGAACTGTCATGTCGTGCTGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTATTCGAAT----
ATCGAAGTAAA-----------ACAAGATGCAAAATAGTGAG--GGAACA----
AAAATAAATTAATTCAATTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL108"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----
GATCAATTTATAATTGGATACAAG--TTCTCTCGTTAATTTGTTGCCAGTC--------
GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGCGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTACCCGAAT----
ATCGAAGTAAATTAA-------ACAAGATGCAAAATAGTGAG--GGAACA----TAAATAAATTAATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL94"/>
--------------------------ATGTATTTTTCTTTT-----
GATCAATTTATAATTGGATACAAG--TTCTCTCGTTAATTTGTTGCCAGTC--------
GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGCGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATCAGAGAGATATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTACCCGAAT----
ATCGAAGTAAATTAA-------ACAAGATGCAAAATAGTGAG--
GA------------------------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL96"/>
-----------------------------TATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAGAATTCTCTCGTTAATTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGCATATATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATY--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATGTAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTACCCGAAT----
ATCGAAGTAAATTAA-------ACAAGATGCAAAATAGTGAG--
GAA-----------------------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL97"/>
--------------------TATAATAATTATTTTTCTTTT-----
GATCAATTTATAATTGGATACAAG--TTCTCTCGTTAATTTGTTGCCAGTC--------
GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGCGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAATGAGAGAGATCC-AAGTCTAGCTAY--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TAYATATAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTACCCGAAT----
ATCGAAGTAAATTAA-------ACAAGATGCAAAATAGTGAG--GGAACA----GAAATAAATTAATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL101"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCGTTAATTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGCGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAATGAGAGAGATCC-AAGTCCAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATC--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTACCCGAAT----
ATCGAAGTAAATTAA-------ACAAGATGCAAAATAGTGAG--GAAACG----GAAATAAATTAATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL117"/>
TCCAAGGTTTACTTGCTACATATAATAATTATTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCGTTAATTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATATATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCCT--TGCGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAATGAGAGAGATCC-AAGTCCAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTA-CGT---TC----CCATC--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACAAT----GAAACAACAA-------ATATTTACCCGAAT----
ATCGAAGTAAATTAA-------ACAAGATGCAAAATAGTGAG--GAAACG----GAAATAAATTAATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Attalea_crassispatha_PL21"/>
------------------------------------CCTTT--------CA-TTT---
ATTGGATACAAG--TTCTCTGG----TTTGTTGCCAGTACTC-----CTAGATGATACTA-
TTGACTTTCTCCTTTCCAA-------------------------------------TAAGTTTTTTT--
CTAGATGG-CAAAATGTGAATGCTTTCTGAWACATA--TTTCTTCTACGAAT----TATCAGC----
ATATATAT----CTTAAATGCCTGTAAAAAATTTTGTC-
TGCCTTTTTATTAATTTGAAACAAAATTTCAGTCTT----AGCTCAT-----
GTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTAGTTCGGTTAACTTTTTGGA------------TTTATCAATGAGC-
CTTTAACTTTATGAAGATCTGTCATGTCGTACCAT---TC----CCATTT-GGGACCCGC-------
TATTCTTCCATGAACATTT-------------AGAGATATTCTTGTRSAT------------------
TATA----GACTTTCCCCA---AACAAT----GAAACAAGAA-------ATATTTACCCG-------
ATCGAAGTAAA-----------
ACAAGAT-----------------------------------------------------
</sequence>
<sequence>
<taxon idref="Bactris_brongniartii_PL83"/>
TCCAAGGTTTACTTGCTACATATAATAATTGTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAT---TT-------CAATCTCTGTCTT----
AGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAC----
TTTTCTATTATACTGCTGCTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGACGATCTGTCATGTCGTCCCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
GATATGTAGACTTCTCCA----AACAAT----GTAACAACAA-------ATGTTCACCCGGAT----
ATCGAAGTGAA-----------ACAAGATGCAAAATAGTGAG--GAAACA----GAAATAAATTGATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Bactris_cf_maraja_PL113"/>
TCCAAGGTTTACTTGCTACATATAATAATTGTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGGATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAT---TT-------
CAATCTCTGTCTTATATAGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTGCTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGACGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCYGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATGTAGACTTCTCCA----AACAAT----GAAAMAACAA-------ATGTTCACCCGGAT----
ATCGAAGTGAA-----------ACAAGATGCAAAACAGTGAG--GAAACA----GACACAAATTGATTC--
TTCTAAAGCA-
</sequence>
<sequence>
<taxon idref="Bactris_coloniata_PL98"/>
----------------TACATATAATAATTGTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTATCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGGATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAT---TT-------
CAATCTCTCTCTTATATAGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTGCTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGACGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACTTCTCCA----AACAAT----GAAACAACAA-------
ATGTTCACCCGGATATCGATCGAAGTGAA-----------ACAAGATGCAAAACAGTGAG--
GAAACA----TAAACAAATTGATTC--TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Bactris_concinna_PL106"/>
-----------------------------TGTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGRATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAT---TT-------
CAATCTCTGTCTTATATAGCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTGCTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGACGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATRTAGACTTCTCCA----AACAAT----GAAACAACAA-------
ATGTTCACCCGGATATCGATCGAAGTGAA-----------
ACAAGATGCAAAACAG--------------------------------------------
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL92"/>
CCCAAGGTTTACTTGCTACATATAATAATTGTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCTGTCTT----
ATCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGAACC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
ATTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GGAACCGGCCGC----
TATTCTTCCAYGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACCTCTCCA----AACAAT----GAAACAACAA-------ATGTTMWCCCGAAT----
ATCGAAGTGAA-----------ACAAGATGCAAAATAGTGAG--GAAACA----GAAATAAACTGATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL93"/>
CCCAAGGTTTACTTGCTCCATATAATAATTGTTTATCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGAGT------------------------------------------------------------------------
CAAAATTCGAATGCTTTCTGATAC--ATATTTCCACTCCGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAC---TT-------AAATCTCTGTCTT----
ATCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGAACCAAAGTCTAGCTAT--TATGAACTTTTCCAT----
ATTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GGAACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACCTCTCCA----AACAAT----GAAACAACAA-------ATGTTCACCCGAAT----
ATCGAAGTGAA-----------ACAAGATGCAAAATAGTGAG--GAAACA----GAAATAAACTGATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Bactris_major_PL114"/>
TCCAAGGTTTACTTGCTACATATAATAATTGTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAT---TT-------
CAATCTCTGTCTTATATAGCTCCT--TGCGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTGCTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAAAGC-
TTTTAACTTTATGACGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATGTAGACTTCTCCA----AACAAT----GAAACAACAA-------ATGTTCACCCGGAT----
ATCGAAGTGAA-----------ACAAGATGCAAAACAGTGAG--GAAACA----GAAACAAATTGATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Bactris_mexicana_PL88"/>
CCCAAGGTTTACTTGCTACATATAATAATTGTTTATCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATTCGAATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAC---TT-------
AAATCTCTGTCTTATAGATCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
ATTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TTTATATAGACCTCTCCA----AACAAT----GAAACAACAA-------ATGTTCACCCGAAT----
ATCGAAGTGAA-----------ACAAGATGCAAAATAGTGAG--GAGACA----GAAATAAACTGATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Bactris_militaris_PL109"/>
CCCAAGGTTTACTTGCTACATATAATAATTGTTTATCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATTCGAATGCTTTCTGATAC--ATATTTCCATTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAC---TT-------
AAATCTCTGTCTTATAGATCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTYTTCCAT----
ATTTCTATTATACWGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACCTCTCCA----AACAAT----GAAACAACAA-------ATGTTCACCCGAAT----
ATCGAAGTGAA-----------ACAAGATGCAAAATAGTGAG--GAGACA----GAAATAAACTGATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Bactris_plumeriana_PL99"/>
CCCAAGGTTTACTTGCTACATATAATAATTGTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCTGTCTT----
ATCTCCT--TGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
ATTTCTATTATACTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTGGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATATAGACCTCTCCA----AACAAT----GAAACAACAA-------ATGTTCACCCGAAT----
ATCGAAGTGAA-----------ACAAGATGCAAAATAGTGAG--GAAACA----GAAATAAACTGATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Bactris_sp_PL80"/>
TCCAAGGTTTACTTGCTACATATAATAATTGTTTTTCTTTT-----GATCAATTT---
ATTGGATACAAG--TTCTCTCG----TTTGTTGCCAGTC--------GTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATAC--ATATTTCCACTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGCAAAAAATTTCGTC-TGCCTTTTTAT---TT-------
CAATCTCTGTCTTATATAGCTCCT--TGCGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTGCTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGACGATCTGTCATGTCGTACCGT---TC----CCATT--GGGACCGGCCGC----
TATTCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT------------------
TATATGTAGACTTCTCCA----AACAAT----GAAACAACAA-------ATGTTCACCCGGAT----
ATCGAAGTGAA-----------ACAAGATGCAAAACAGTGAG--GAAACA----GAAACAAATTGATTC--
TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Barcella_odora_PL121"/>
------------------------------------TTTTC-----TTTTCATTT---
ATTGGATACTAG--TTCTCTGG----TTTGTTGCCAGTC--------CTAGATGATACTA-
TTGACTTTCTCCTTT-CTATTTTCCTTTTTTCTT---------AAAAAAAAACTA-TAAGTTGTTT---
CTA--TGG-CAAAATGTGAATGCTTTCTGATAC--ATATTTCTTCTACGAAT----
TATCAG--------------------------------AAAATTTTGTC-TGCCCTTTTAT---
TTTAAACA-AAATTTCAGTCTT----AGCTCCT--TGTGGTCATG-
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATAGGAGAGATCC-AAGTCTAGCTAT--TGTGAACTTTTCCAT----
TTTTCTATCATACTGCCACTAGTTCTGTTACTTTTT-TGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCAT---TC----CCATT--GGGAC---CCGC----
TACTCTTCCATGAAC----------ATATT--
AGAGATATTCTTGCGCATTATATATATATATATATATATATATGGACTTCTCCA----AACAAT----
GAAACAGCAA-------AAATTTAGCCG-------ATCGAAGTAAA-----------
ACAAGATGCAAAATATAGTG----------------------------------------
</sequence>
<sequence>
<taxon idref="Beccariophoenix_madagascariensis_PL47"/>
TCCAAGGTTTACTTGCTACTTATAATAATTATTTTTCTTTT--------CAATTT---
ATTGGATACAAG--TTCTCTGGTTAATTTGTCGCCAGTC--------CTAGATGATACTA--
TGACTTTCTCCTTTC-TATTTTTTTTTTTAAA-----------------------TATAGTTTTTT--
CTA--TGG-CAAAATGTGATTGCTTTCTGATACATA--TTTCTTCTACTAAT----TATCAGC----
ATAT--------CTTAAATGCCTGTAAAAAATTTTGTC-TGCCTTTTTATT--TTAAACAA--
AATATCAGTCTC----AGCTCCT--
TGTGGTCATGTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T---GAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATTATACTGCTACTAGTTCTGTTAACTTTTTGGA----------TTTTTATTAATGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCAT---TC----CCATTT-GGGACCCGC-------
TATTCTTCCATGAACATATT------------AGAGATATTCTTGTGCAT------------------
TATA----GACTTCCCCCA---AACAAT----GAAACAACAA-------ATATTTACCCG-------
ATCGAAGTAAA-----------ACAAGATGCAAAATAGTGAGAGGAAACGTACAGAAATTC----------
TTCTAAAG---
</sequence>
<sequence>
<taxon idref="Cocos_nucifera"/>
------------------------------------CTTTT--------CAATTT---
ATTGGATACAAG--TTCTCTGG----TTTGTTGCCAGTC--------CTATATGATACTA-
TTGACTCTCCTTTCTTCTA-------------------------------------TAAGTTTTTTT--
CTA--TGG-CAAAATGTGAATGCTTTCTGATACATA--TTTCTTCTACGAAT----TATCAGC----
ATATATAT----CTTAAATGCCTGTA-AAAATTTTGTC-TGCCTTTTTATT--TGAAACAA--
AATTTCAGTCTC----AGCTCCT----
AGGTCATGTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATTC-AAGCCTAGCTAT--TATGAACTTTTCCAT---
TTTTTTTATTATACTGCTACTCGTTCTGTTAATTTTTTGGA----------TTTTTATCAATGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCAT---TC----CCATTT-CGGACCCGC-------
TATTCTTCCATGAACATATATATTT-------AGAGATATTCTTGTGCAT------------------
TATA----GACTTTCCCCA---AACAAT----GAAACAAGAA-------ATATTTACCCG-------
ATCGAAGTAAA-----------
ACAAGAT-----------------------------------------------------
</sequence>
<sequence>
<taxon idref="Desmoncus_orthacanthos_PL100"/>
---------------------------------TATTTTTC-----TTTTCATTT---
ATTGGATACAAG--TTCTCTCGTTAATTTGTTGCCAGTC--------CTAGATGATGCTA-
TTGGCT------------------------------------------------------------------------
CAAAATGTGAATGCTTTCTGATACATCTATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTM-TGCCTTTTAAT---TT-------AAATCTCAGTCTT----
AGCTCCTTGTGTGGTCATG-
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGGCAGATCC-CAGTCTAGATAT--TATGAACTTTWCCAT----
TTTTCTATTATAGTGCTACTGGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAAAGC-
TTTTTACTTTATGAACATCTGTCATGTCGTACCCT---TC----CCATT--GGGACCGGCCGC----
TATGCTTCCATGAAC----------GTATC--AGAGATATTCTTGTGCAT----------------
TATATATATAGACTTCTCCAAATTAACAAT----GAAACAACAA-------CTATTTACCCGAAT----
ATCGAAGTAAA-----------ACAAGATGCAAAATAGTGAG--GAAACA----GAAATAAATTAATTC--
TTCTAAAGCTG
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_PL90"/>
------GTTTACTTTCTACTTATAATAATTATTTTTCTTTT--------CAATTT---
ATTGGATACAAG--TTCTCTCGTTAATTTGTTGCCAGTC--------CTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTCTCTGATACATCTATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCGGTCTT----
AGCTCTT---GTGGCCATG-
CTTATGACACTACTAGAGGAAGAGATTTTTGTGACGGCAAAAATTTGTCACAAAAAATCAAAATTTGTCATAAAAATTTTTTTGTGACGGCCCGTGATGAATTTTTGACCGTTACATTTACGGGTGTCACAAATATTTTTGTGACGATAAACAACCGTTTTAAATATTTTTGTGATGATTTTTTATGATGAAATGAAGTCGTCACAAAAATGACCGTTATCTTTAATTAACAGTGACAATTAATTGTGATGAAAAAAAAAATATCAGTAAAAATTATTACCATGAATAAGAGACCGTAACAAATAATATTATCATGAGACAGATCC-
CAATCCAGATAT--TATGAACTTATTCAT----TTTTCTATTATAGTGCCACTGGTTCTGTTACTTTTT-
GGA---------TTTTTTATTAAAAAGC-TTTTTACTTTATGAAGATCTGTCATGTCGTACCCT---
TC----CCATT--GGGACCGGCCGC----TATGCTTCCATGAAC----------GTATC--
AGAGATATTCTTGTGCAT----------------TATATATATAGACTTCTCCAAATTAACAAT----
GAAACAACAA-------ATATTTACCCGAAT----ATCGAAGTAAA-----------
ACAAGATCCAAAATAGTGAG--GAAACA----GAAATAAATTAATTC--TTCTAAAGCTG
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_var_prunifer_PL115"/>
------GTTTACTTTCTACTTATAATAATTATTTTTCTTTTC----AATTT-------
ATTGGATACAAG--TTCTCTCGTTAATTTGTTGCCAGTC--------CTAGATGATGCTA-
TTGACT------------------------------------------------------------------------
CAAAATGTGAATGCTCTCTGATACATCCATTTCCTCTACGAAT----TATCAGC----ATAT--------
CTTAAATGCCTGTAAAAAATTTCGTC-TGCCTTTTTAT---TT-------AAATCTCAGTCTT----
AGCTCTT---GTGGTCATG-
CTTATGACGCTGCTAGAGAAAGAGGCTTTTGTGACGGCAAAAATTCATCACAAAAAATCAAAATCCGTCATAAAATTTTTTTTGTGACAGCTCGTGATGAATTTTTGACCGTCACATTTACRGGTGTCACAAATATTTTTGTGACGATAAACAACCGTTATAAATATTTTTGTGATGATTTTTTATGACGAAATGAAGTCGTCACAAAAATGACTGTTATTTTTAATTAACAGTGACAATTAATTGTGATGAAAAAAAAA-
TATCAGTAAAAATTATTACCATGAATAGRAGACCGTAACAAATAATATTATCATGAGACAGATCC-
CAATCCAGATAT--TATGAACTTATTCAT----TTTTCTATTATAGTGCTACTGGTTCTGTTACTTTTT-
GGA---------TTTTTTATTAAAAAGC-TTTTTACTTTATGAAGATCTGTCATGTCGTACCCT---
TC----CCATT--TGGACCGGCCGC----TATGCTTCCATGAAC----------GTATC--
AGAGATATTCTTGTGCAT----------------TATATATATAGACTTCTCCAAATTAACAAT----
GAAACAACAA-------ATATTTACCCGAAT----ATCGAAGTAAA-----------
ACAAGATGCAAAATAGTGAG--GAAACA----GAAATAAATTAATTC--TTCTAAAGCTG
</sequence>
<sequence>
<taxon idref="Elaeis_guineensis_PL124"/>
----------------------------------------------------------------------------------------------------------------------------------------------------------
TTTTTTTTTTTTT--AACTA-TAAGTTGTTT---CTA--TGG-CAAAATGTGAATGCTTTCTGATAC--
ATATTTCTTCTACGAAT----TATCAG--------------------------------AAAATTTTGTC-
TGCACTTTTAT---TTTAAACA-AAATTTCACTCTT----AGCTCCT--TGTGGTCATG-
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TKATGGGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----TTTT-
TATCATACTGCCACTAGTTCTGTTACTTTTT-GGA-------TTTTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCATTGATC----CCATT--GGGAC---CGGC----
TATTCTTCCATGAAC----------ATATT--AGAGATATTCTTGCGCAT--------------
TATATATATATGGACTTCTCCA----AACAAT----GAAACAACAA-------
AAATTTA---------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL110"/>
-----------------------------------TTTTTC-----TTTTCATTT---
ATTGGATACCAG--TTCTCTGG----TTTGTTGCCAGTC--------CTAGATGATACTA-
TTGACTTTCTCCTTT-CTATTTTCTTTTTTTTTTYYTTTTTTTTTTTT--AACTA-TAAGTTGTTT---
CTA--TGG-CAAAATGTGAATGCTTTCTGATAC--ATATTTCTTCTACGAAT----
TATCAG--------------------------------AAAATTTTGTC-TGCCCTTTTAT---
TTTAAACA-AAATTTCACTCTT----AGCTCCT--TGTGGTCATG-
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGGGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATCATACTGCCACTAGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCATTGATC----CCATT--GGGAC---CCGC----
TATTCTTCCATGAAC----------ATATT--AGAGATATTCTTGCGCAT--------------
TATATATATATGGACTTCTCCA----AACAAT----GAAACAACAA-------AAATTTAGCCG-------
ATCGAAGTAAA-----------
ACAAGATGCAAAATATAG------------------------------------------
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL87"/>
---------------------------------TATTTTTC-----TTTTCATTT---
ATTGGATACCAG--TTCTCTGG----TTTGTTGCCAGTC--------CTAGATGATACTA-
TTGACTTTCTCCTTT-CTATTTTCTTTTTTTTTTCTTTTTTTTTTTTT--AACTA-TAAGTTGTTT---
CTA--TGG-CAAAATGTGAATGCTTTCTGATAC--ATA--TCTTCTACGAAT----
TATCAG--------------------------------AAAATTTTGTC-TGCCCTTTTAT---
TTTAAACA-AAATTTCACTCTT----AGCTCCT--TGTGGTCATG-
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGGGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----
TTTTCTATCATACTGCCACTAGTTCTGTTACTTTTT-GGA---------TTTTTTATTAAAGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCATTGATC----CCATT--GGGAC---CCGC----
TATTCTTCCATGAAC----------ATATT--AGAGATATTCTTGCGCAT--------------
TATATATATATGGACTTCTCCA----AACAAT----GAAACAACAA-------AAATTTAGCCG-------
ATCGAAGTAAA-----------ACAAGATGCAAAATATAGTG--
AG------------------------------------
</sequence>
<sequence>
<taxon idref="Jubaea_chilensis_PL62"/>
------------------------------------CTTTT--------CAATTT---
ATTAGATACAAG--TTCTCTGG----TTTGTTGCCAGTCCTAG----
CTAGATGATATACTTTGACTTTCTTCTTCTCTA-------------------------------------
TAAGTTTTTTT--CTAGATGG-CAAAATGTGAATGCTTTCTGATACATA--TTTCTTCTACGAAT----
TATCATC----ATATATATATATCTTAAATGCCTGTAAAAAAATTTGTC-TGCCTTTTTATT--
TTAAACAA--AATATCAGTCTC----AGCTCCT--
TGTGGTCATGTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TGTGAACTTTTCCAA-----
CTTTTTATTTACTGCTACTAGTTCTGTTAACTTTTTGGA---------TTTTTTATCAATGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCAT---TC----CCATTT-GGGACCCGC-------
TATTCTTCCATGAACATATTT-----------AGAGATATTCTTGTGCAT------------------
TATA----GACTTTCCCCA---AACAAT----GAAACAAGAA-------ATATTTACCCG-------
ATCGAAGTAAA-----------
ACAAGAT-----------------------------------------------------
</sequence>
<sequence>
<taxon idref="Parajubaea_torallyi_PL64"/>
------------------------------------CTTTT--------CA-TTT---
ATTGGATACAAG--TTCTCTGG----TTTGTTGCCAGTACTACTC--CTAGATGATACTA-
TTGACTTTCTCCTTCTCTA-------------------------------------
TAAGTTTTTTTTTCTAGATGG-CAAAATGTGAATGCTTTCTGATACATA--TTTCTTCTACGAAT----
TATCATC----ATATATATATATCTTAAATGCCTGTAAAAAATTTTGTC-TGCCTTTTTATT--
TTAAACAA--AATATCAGTCTC----AGCTCCT--
TGTGGTCATGTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCA------TTTTTCTATTAC----
ACTAGTTCTGTTAACTTTTTGGA--------ATTTTTTACCAATGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCCT---TC----CCA-CT-GGGACCCGC-------
TATTCTTCCATGAACATATTT-----------AGAGATATTCTTGTGCAT------------------
TATA----GACTTTCCCCCA--AACAAT----GAAACAAGAA-------ATATTTACCCG-------
ATCGAAGTAAA-----------
ACAAGAT-----------------------------------------------------
</sequence>
<sequence>
<taxon idref="Reinhardtia_gracilis_var_rostrata_PL119"/>
TCCAAGGTTTACTTGCTACTTATAATAATTACTTTTTTCTT-----TTTCAATTT---
ATTGGATACAAG--TTCTCTGA----TTTGTTGACAGCTAGTTCTAGATGAATGACACTC-
TTGACTTTATCCTTT-CTTTCATCTTCTTCTTCTTCTTCTTTTTCC----AAATA-TAAGTGTTTT---
CTA--TG--GCAAATGTGAATGGTTTCT--TAC--ATATTTCTTCTACAAAT----TATCAGC----
ATAT--------TTTAAATGCCTGTAAAAAATTTTGTC-CACCTTTTTAC---TTTAAACA-
AAATTTCAGTCTT----AGCTCCT--CGTGGTCATG-
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGACAGAGATCC-
AAGTCTAGCTAT-------------------------------------------------TACTTTTT-
GCA--------TTTCTTTATCGATGAGC-TTTTAACTTTATGAAGTTCTGTCATGTCGTACCAT---
TC----CCATT--GGGAC---CCGC----TATTCTTCCATGAAC----------ATGTT--
AGAGATATTCTTGTGCAT----------------------GATAGACTTCCCCA----
A------------------------------------------------------------------
ACAAGATGCAAAATAGTGAG--GAAACA----GAAATTC----------TTCTAAAGCAG
</sequence>
<sequence>
<taxon idref="Reinhardtia_latisecta_PL120"/>
------GTTTACTTTCTACTTATAATAACTACTTTTCTTTTCTTTTATTCAATTC---
ATTGGATATAAG--TTCTCTAG----TTTGTTGCCAGTT--------CTAGATGACACGC-
TTGAACTTTTCCTTA-CCATTTTATTAT----------------------AATTA-TAAATGTTGT---
TTA--TGG-CAAAATGTGAATGATTTCTGATAC-------ATTTCTAGGAAT----TATCAGT----
ATAT--------TTTAAATACCTG-AAAAAAAATTGTC-TACTTTTTTATTATTTGAAACA-
AAACTTCAGTCTT----AGCTCCT--TGTGGTCATG-
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTTTAACTAT--TATGAACTTTTCCAT----
GTGTCTATGATACTGCTGCTAGTTCTATTACTTTTT-GGA------TTTTTTTTTATTAATGAGC-
TTTTA--------ACGATTAGTCATGTCGTACCGT---TC----CCCTT---GGAC---CCGC----
TATTCTTCCATGAAC----------ATGTT--
AGAGATA-----------------------------------TGGACTTCTCCA----
AACAATATATGAAACAACGA------------------------
AAATGAAGTAAGGCCATCACTGTGATTCATCTAAACCAATACT--
GTAAC---------------------------------
</sequence>
<sequence>
<taxon idref="Roystonea_borinquena_PL122"/>
------------------------------------------------------------
TGGATATAAG--TTCTCTGG----TTTGTTGCCAGTT--------CCAGATGACACTC-
TAGACCTTTCCTTTT-CTTTCTTTTCTTTCTTTCTTTTTTTTTTAAAAAAAAAATATAAATGTTTT---
TTA--TGGAAAAAATGCGAATGGTTTCAGATAC--ACATTTCTTCTAAGAAT----TATCAGT----
ATAT--------TTTAAATGCCTGTAAAAAATTTTATC-TACCTTTTTAT---TTTAAACA-
ATATTTCAGTTTT----AGCTCCT--TGTTGTCATG-
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGATAGATCC-AACTTGAACTGT--TATGAACTTTTCCTT----
GTTTCTATGATACTGCTACTGGTTCTATTACTTTTT-AGG--------TTTTTTTATTAATGAGC-
TTTTAACTTTATGAAGATTTGTCATGTCGTACCAT---TC----CCATT--GGGAT---CCGC----
TATTCTTCCACGAAC----------ATGTT--
AGAGATATTCGTATGTAT---------------------------ATATCATAG----AACAAG----
GAAACAAGAA-------ATGTTTACCGG-------
ATCGAAGTAAATCCATCAGTTTGTAAGCTGCAAAATA---------------------------------------------
</sequence>
<sequence>
<taxon idref="Roystonea_oleracea_PL123"/>
TCCAAGGTTTACTTGCT-----------------------------ACTTAATTC---
ATTGGATATAAG--TTCTCTGG----TTTGTTGCCAGTT--------CCAGATGACACTC-
TAGACCTTTCCTTTT-CTTTCTTTCTTTCTTTCTTTTTTTTT--------AAATA-CAAATGTTTT---
TTA--TGGAAAAAATGCGAATGGTTTCAGATAC--ACATTTCTTCTAAGAAT----TATCAGT----
ATAT--------TTTAAATGCCTGTAAAAAATTTTATC-TACCTTTTTAT---TTTAAACA-
ATATTTCAGTTTT----AACTCCT--TGTTGTCATG-
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGATAGATCC-AACTTTAACTGT--CATGAACTTTTCCTT----
GTTTCTATGATACTGCTACTGGTTCTATTACTTTTT-AGG--------TTTTTTTATTAATGAGC-
TTTTAACTTTATGAAGATTTGTCATGTCGTACCAT---TC----CCATT--GGGAT---CCGC----
TATTCTTCCACGAAC----------ATGTT--
AGAGATATTCGTATGTAT---------------------------ATATCATAG----AACAAG----
GAAACAAGAA-------ATGTTTACCGG-------
ATCGAAGTAAATCCATCAGTTTGTAAGCTGCAAAATAGTGAG--GAAACA----GACATTC----------
TTCTAAACCAG
</sequence>
<sequence>
<taxon idref="Syagrus_romanzoffiana_PL27"/>
------------------------------------CTTTT--------CAATTT---
ATTGGATACAAG--TTCTCTGG----TTTGTTGCCAGTACTC-----CTAGATGAAACTA-
TTGACTTTCTCCTTTCCTA-------------------------------------CAAGTTTTTTC--
CTAGATGG-CAAAATGTGAATGCTTTCTGATACATA--TTTCTTCTACGAAT----TATCATC----
ATATATAT----CTTAAATGCCTGTAAAAAGTTTTGTC-TGCCTTTTTATT--TTAAACAA--
AATATCAGTCTC----AGCTCCT--
TGTGGTCATGTTTATTATGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTATGAGAGAGATCC-AAGTCTAGCTAT--TATGAACTTTTCCAT----TTTTCTAT-----TGC-
ACTAGTTCTGTTAACTTTTTGGG--------ATTTTTTATCAATGAGC-
TTTTAACTTTATGAAGATCTGTCATGTCGTACCAT---TC----
CCATTTAGGACCCGCTATATATATATTCTTCCATGAACATATTT-----------
AAAGATATTCTTGTGCAT------------------TATA----GACTTCCCCCA---AACAAT----
GAAACAAGAA-------ATATTTGCCCA-------ATCGAAGTAAA-----------
ACAAGAT-----------------------------------------------------
</sequence>
</alignment>

<!-- The sequence alignment (each sequence refers to a taxon
above). -->
<!-- ntax=47
nchar=688 -->
<alignment id="alignment3" dataType="nucleotide">
<sequence>
<taxon idref="Acrocomia_aculeata_PL75"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACGAACC-------------------------------ATTCGAGTGG---CATGAACTT---
TCTTA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATATAATGCA----------------------------------------------------
TGCATAA-TATAACC------------------ATTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA---------------------------------------------------------------------------------------------
ACTTTTT--GGTGCTATCCG------------------------------------------TAAAG-
TTCCCTTCTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAACTGAG-
AAAATATTTG--CTCTCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL76"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACGAACC-------------------------------ATTCGAGTGG---CATGAACTT---
TCTTA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATATAATGCA----------------------------------------------------
TGCATAA-TATAACC------------------ATTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA---------------------------------------------------------------------------------------------
ACTTTTT--GGTGCTATCCG------------------------------------------TAAAG-
TTCCCTTCTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAACTGAG-
AAAATATTTG--CTCTCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL77"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACGAACC-------------------------------ATTCGAGTGG---CATGAACTT---
TCTTA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATATAA--------------------------------------------------------
TGCATGC-ATAATAT--------------AACCATTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA---------------------------------------------------------------------------------------------
ACTTTTT--GGTGCTATCCG------------------------------------------TAAAG-
TTCCCTTCTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAACTGAG-
AAAATATTTG--CTCTCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Acrocomia_crispa_PL116"/>
GGGTCC----GCTT--------GATCAT--GTTCGTCTTCTG-
CAAACTAACC-------------------------------ATTTGAGCGG---CATGAACTTT---
CTCA--------------------------------------------------
CTATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATATAATTTCTATATAA---------------------------------------------
TGCATGC-ATAATATAACCATGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA---------------------------------------------------------------------------------------------
CCTTTTT--GGTGCTATCCGTCTGTATATTT-GGCTATGAAGGCAAT----ATCATGATACATAAAG-
TTCCCTTCTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAACTGAG-
AAAATATTTG--CTCTCAGGAATT---------------------
</sequence>
<sequence>
<taxon idref="Acrocomia_intumescens_PL78"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACTAACC-------------------------------ATTCGAGTGG---CATGAACTT---
TCTTA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATATAA--------------------------------------------------------
TGCATGC-ATAATAT--------------AACCATTCTCC------------------
TATTATTATGATTATTATTTT--------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA---------------------------------------------------------------------------------------------
ACTTTTT--GGTGCTATCCG------------------------------------------TAAAG-
TTCCCTTCTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAACTGAG-
AAAATATTTG--CTCTCAGGAATTACTACCGTTGCTCCACCGAGG
</sequence>
<sequence>
<taxon idref="Aiphanes_horrida_PL112"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACTAACC-------------------------------ATTCGAGTGG---CTTGAACTT----
CTCA--------------------------------------------------
CCATTTGCAGCGTGCGCACCACGCAGACATGTGGCACTAACGTGTTCTATATAAATTCTATATAA---------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTGTTATTT---------------------
TTTATCAGATTACGAATCTTCAATTGTTCTCTTGTAAA----
CCGGCGTCGTCTTATATATATCAATCATTACCCGAACTGTT-
TATCCAAAGCTAATCAT------------------------------CCTTTTT--
GGTGCTATCCGTCTGTATATTT-GGCTATAAAGGCAAT----ATCATGATACCTAAAG-
TTCCCTTCTGATTATTTGCTC-TTTACTGGTA-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGCAGGAATTACTACCGWTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Aiphanes_minima_PL111"/>
--------------------------------------------
AACTAACC--------------------------------ATTCGAGTGG---CTTGAACTT----
CTCA--------------------------------------------------
CCATTTGCAGCGTGCGCACCACGCAGASATGTGGCACTAACGTGTTCTATATAAATTCTATATAA---------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTGTTATTT---------------------
TTTATCAGMTTACSAATCTTCAATTGTTCTCTTGTAAA----
CCGGCGTCGTCTTATATATATCAATCATTACCCGAACTGTT-
TATCCAAAGCTAATCAT------------------------------CCTTTTT--
GGTGCTATCCGTCTGTATATTT-GGCTATAAAGGCAAT----ATCATGATACCTAAAG-
TTCCCTTCTGATTATTTGCTC-TTTACTGGTA-----------------------GAAGAACTAATTGAG-
AAAATAT--------------------------------------
</sequence>
<sequence>
<taxon idref="Aiphanes_ulei_PL107"/>
GGGTCCGCTAGCTT--------GATCAT--TTTCTTCTTCTG-
CAAACTAACC-------------------------------ATTCGAGTGG---CTTGAACTC----
CTCA--------------------------------------------------
CCATTTGCAGCGTGCACACCACGCAGAGATATGGCACTAACGTGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TATATTAATCATTACCCGAACTGTT-
TATCCAAAGCTAATCAT------------------------------CCTTTTT--
GGTGCTATCCGTCTGTATATTT-GGCTATGAAGGCAAT----ATCATGATACCTAAAG-
TTCCCTTCTGATTGTTTGCTC-TTTACTGGTG-----------------------GAAGAACTAATTGAG-
AAAATAATTG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGA
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL102"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACTAACCAACCAACC-----------------------ATTCAAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCGCACCACGCAGAAATATGGCACCAGCGTGTTCGATATAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA---------------------------------------------------------------------------------------------
ACTTTTT--GGTGCCATCCGTCTGTATATTT-GGCTATGAAGGCAAT----ATCATGATGCATAAAG-
TTCCCTTGTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATA---------------------------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL95"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACTAACCAACCAACC-----------------------ATTCAAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCGCACCACGCAGAAATATGGCACCAGCGTGTTCGATATAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTTTTGTAAA---------------------------------------------------------------------------------------------
ACTTTTT--GGTGCCATCCGTCTGTATATTT-GGCTATGAAGGCAAT----ATCATGATGCATAAAG-
TTCCCTTGTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGTAGGAATTACTACCGTTGCTCCTGCGAGG
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL104"/>
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL85"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACTAACCAACCAACC-----------------------ATTCAAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCGCACCACGCAGAAATATGGCACCAGCGTGTTCTATRTAATTTCTATATAA---------------------------------------------
TGCATAA-YATAACCA----TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTYATTTGTTCTCTTGTAAA---------------------------------------------------------------------------------------------
ACTTTTT--GGTGCTATCCGTCTGTATATTT-GGCTATGAAGGCAAT----ATCATGATACATAAAG-
TTCCCTTGTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL86"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACTAACCAACCAACC-----------------------ATTCAAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCGCACCACGCAGAAATATGGCACCAGCGTGTTCTATATAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTYATTTGTTCTCTTGTAAA---------------------------------------------------------------------------------------------
ACTTTTT--GGTGCTATCCGTCTGTATATTT-GGCTATGAAGGCAAT----ATCATGATACATAAAG-
TTCCCTTGTGATTATTTGCTC-TTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL108"/>
GGGTCC----GCTT--------GATCGT--TTTCGTCTTCTG-
CAAACTAACCAACC---------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATTTAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCAT---TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCACTTGTAAA---------------------------------------------------------------------------------------------
CCTTTTT--GGTGCT--------GTATATTT-GGCTATGAAGGCAAT----ATCATCATACATAAAG-
TTCCCTTCTGATTATTTGCTCTTTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL94"/>
GGGTCC----GCTT--------GATCGT--TTTCGTCTTCTG-
CAAACTAACCAACC---------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATTTAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCAT---TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCACTTGTAAA---------------------------------------------------------------------------------------------
CCTTTTT--GGTGCT--------GTATATTT-GGCTATGAAGGCAAT----ATCATCATACATAAAG-
TTCCCTTCTGATTATTTGCTCTTTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATAT--------------------------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL96"/>
------------------------------------CTTCTG-
CAAACTAACCAACC---------------------------ATTCGAGTGG---GATGAACTT----
CTCA--------------------------------------------------
GCATTTGATGCGTGCGCACCACGCAGAAATATGGCACCAGCGTGTTCTATTTAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCAT---TGGCTAATTAATCTTTCTTC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCACTTGTAAA---------------------------------------------------------------------------------------------
CCTTTTT--GGTGCT--------GTATATTT-GGCTATGAACGCAAT----ATCATCATACATAAAG-
TTTCCTTCTGATTATTTGCTCTTTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGCAGGA------------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL97"/>
GGGTCC----GCTT--------GATCGT--TTTCGTCTTCTG-
CAAACTAACCAACC---------------------------ATTCGAGTGG---CWTGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTAYTTAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCAT---TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCACTTGTAAA---------------------------------------------------------------------------------------------
CCTTTTT--GGTGCT--------GTATATTT-GGCTATGAAGGCAAT----ATCATCATACATAAAG-
TTCCCTTCTGATTATTTGCTMTTTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL101"/>
GGGTCC----GCTT--------GATCGT--TTTYGTYTTCTG-
CAAACTAACCAACC---------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATTTAATTTTTATATAA---------------------------------------------
TGCATAA-TATAACCAT---TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCACTTGTAAA---------------------------------------------------------------------------------------------
CCTCTTT--GGTGCT--------GTATATTT-GGCTATGAAGGCAAT----ATCATCATACATAAAG-
TTCCCTTCTGATTATTTGCTCTTTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL117"/>
-------------------------------------------
CAACC------------------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATTTAATTTTTATATAA---------------------------------------------
TGCATAA-TATAACCAT---TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTACGAATCTTCATTTGTTCACTTGTAAA---------------------------------------------------------------------------------------------
CCTCTTT--GGTGCT--------GTATATTT-GGCTATGAAGGCAAT----ATCATCATACATAAAG-
TTCCCTTCTGATTATTTGCTCTTTTACCGGTG-----------------------GAAGAACTAATTGAG-
AAAATATTTG--CTCGCAGGAATTACTACCGTTGCTCCASCGAGG
</sequence>
<sequence>
<taxon idref="Attalea_crassispatha_PL21"/>
GGGTCC----GCTA--------GATCGT--TTTCGTCTTCCG-
CAAACT---------------------------------------AAG------CATGAACTT----
CTTA--------------------------------------------------
CCGTTTGATGCGTGCACACCACGCAGAAATATGGCTCCAGCGTATTCTATATAA--------------------------------------------------------
TGCGTGA-TATAACCA----TGGCC---------------------------------
TATTATTATTATTATTATTATTATTATTATTAT--------
TTTATCACCTTACGAATCTTCATTTGTTCTCTTGTAAA----CCGGCGTAGTCT--TACATATCA----
TTACCCGAACTGCT-TATCCGCAGCTAATTAA------------------------------CCTTTTT--
GGTGCTATCCGTCTGTAAATTT-GGCTACAAAGACAAT----ATC------------G-
TTCCGTTGTGATTATTTGCTC-TTTACCATGTTTTGGTGTGCTCTTTTCCACCGTGGAGAACTCATTGAG-
AAAATATATG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Bactris_brongniartii_PL83"/>
GGTCCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACCAACC-------------------------------ATTCGAGTGG---CATGAACTT-
ATTCTCA--------------------------------------------------
CCTTTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTTCTATATAATTTCTATATAATGCATAATATAACCATCATGGCTAATTAATCTAATTTCTATATAATGCATAA-
TATAACCATCA-TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTGTCACCTTATGAATCTTCATTTGTTCTCTTTTAAA----CCGGCGTCGTCT--
TATATATCGATAATTACCCGAACCGTT-
TATCCAAAGCTAATCATTACCCGAACTGCTTATCCAAAGCGAATCATCCTTTTT--GGTGCTA-
CCGTCTGTACATTT-GGCTATGAAGGCAAT----TTCATGATACATAAAG-
TTCCCGTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
AAAATATTCA--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Bactris_cf_maraja_PL113"/>
GGTCCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACCAACC-------------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTACTATATAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCATCA-TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTATGAATCTTCATTTGTTCTCTTTTAAA----CCGGCGTCGTCT--
TATATATCGATCATTACCCGAACCGTT-
TATCCAAAGCTAATCATTACCCGAACTGCTTATCCAAAGCTAATCATCCTTTTT--
GGTGCTATCCGTCTGTACATTT-GGCTATGAAGGCAAT----ATCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
AAAACATTCA--TTCGCAGGAATTACTACCG--------------
</sequence>
<sequence>
<taxon idref="Bactris_coloniata_PL98"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACCAACC-------------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTACTATATAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCATCA-TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTATGAATCTTCATTTGTTTTCTTTTAAA----CCGGCGTCGTCT--
TATATATCGATCATTACCCGAACCGTT-
TATCCAAAGCTAATCATTACCCGAACTGCTTATCCAAAGCTAATCATCCTTTTT--
GGTGCTATCCGTCTGTACATTT-GGCTATGAAGGCAAT----TTCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
AAAACATTCA--TTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Bactris_concinna_PL106"/>
--------------------------------------------
AACCAACC--------------------------------ATTCAAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTTCTATATAATTTCTATATAA---------------------------------------------
TGCATAA-TATAACCATCA-TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTTT--------------------
TTTATCAGCTTATGAATCTTCATTTGTTCTMTTTTAAA----CCGGCGTCGTCT--
TATATATCGATCATTACCCGAACCGTT-
TATCCAAAGCTAATCATTACCCGAACTGCTTATCCAAAGCTAATYATCCTTTTT--
GGTGCTATCCGTCTGTACATTT-GGCTATGAAGGCAAT----TTCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
AAAA-----------------------------------------
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL92"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACCAACCAACC---------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTTCTATCTAATTTCCATATAA----------------------------------------------------------
CCACCA-TCGCTAATTAATCTTTCTCC------------------
TATTATTATTATTATTATTATTGTTATTATTATTATTATTATTTGTCAGCGTATGAATCTTCATT------------------------------------------------------------------------------------------------------------
CTTTTT--GGTGCTATCCGTCCATATATTTTGGCTATGAAGGCAAT----ATCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
TAAATATTCA--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL93"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACCAACCAACCAACC-----------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTTCTATCTAATTTCCATATAA----------------------------------------------------------
CCACCA-TCGCTAATTAATCTTTCTCC------------------
TATTATTATTATTATTATTATTATTATTATTATTATTA---
TTTGTCAGCGTATGAATCTTCATT------------------------------------------------------------------------------------------------------------
CTTTTT--GGTGCTATCCGTCCATATATTTTGGCTATGAAGGCAAT----ATCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
TAAATATTCA--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Bactris_major_PL114"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACCAACC-------------------------------ATTCAAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACCCCACGCAGAAATATGGCACCAGCGTGTTCTATGTAATTTCCATATAA---------------------------------------------
TGCATAA-TATAACCATCA-TGGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTT---------------------
TTTATCAGCTTATGAATCTTCATTTGTTCTCTTTTAAA----CCGGCGTCGTCT--
TATATATCGATCATTACCCGAACCGTT-
TATCCAAAGCTAATCATTACCCGAACTGCTTATCCAAAGCTAATCATCCTTTTT--
GGTGCTATCCGTCTGTACATTT-GGCTATGAAGGCAAT----TTCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
AAAACATTCA--TTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Bactris_mexicana_PL88"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACCAACCAACC---------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTTCTATGTAATTTCCCATATAA--------------------------------------------
AGCATAAATATAACCACCA-TCGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTTTTT------------------------
GTCAGCTTATGAATCTTCATT------------------------------------------------------------------------------------------------------------
CTTTTT--GGTGCTATCCGTCCATATATTT-GGCTATGAAGGCAAC----ATCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
TAAATATTCA--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Bactris_militaris_PL109"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTTCTG-
CAAACCAACCAACC---------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTTCTATGTAATTTCCATATAA---------------------------------------------
TGCATAA-ATATAACCACC-ACGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTTTTT---------------------
GTCATCAGCTTATGAATCTTCATT------------------------------------------------------------------------------------------------------------
CTTTTT--GGTGCTATCCGTCCATATATTT-GGCTATGAAGGCAAT----ATCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
TAAATATTCA--CTCGCAG--------------------------
</sequence>
<sequence>
<taxon idref="Bactris_plumeriana_PL99"/>
GGGTCC----GCTT--------GATCAT--TTTCGTCTYCTG-
CRAACCAACCAACC---------------------------ATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATGCGTGCACGCCACGCAGAAATATGGCACCAGCGTGTTCTATCTAATTTCC---------------------------------------------------------
A-TATAACCACCA-TCGCTAATTAATCTTTCTCC------------------
TATTATTATGATTATTATTATTTTTATTT------------
TTTGTCAGCTTATGAATCTTCATTTGTTCTCTTGTAAA----CCGGCGTCGCCT--
TATATATCGATCACTACCCGAACTGTT-
TGTCCAAAGCTAATCGTTACCCGAACTGCTCATCCAAAGCTAATCATCCTTTTT--
GGTGCTATCCGTCCATATATTT-GGCTATGAAGGCAAT----ATCATGATACATAAAG-
TTCCCTTCGGATTATTTGCTC-TTTACCGGCG-----------------------GAAGAACTAATTGAG-
AAAATATTCA--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Bactris_sp_PL80"/>
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Barcella_odora_PL121"/>
GGGTCC----GCTA--------GATCTT--TTTCGTCTTCTG-
CAAACTGACC-------------------------------GTTCGGGTGG---CATGGACTT----
CTTA--------------------------------------------------
CCATTTGATACGTGCACACCACGCAGACAAATGGCACCAGCGTGTTCTATATAA--------------------------------------------------------
TGAATAA-TATAACCT----TGGCTAATTAATCTTTCTCCCAT------------------
TATTATGATTATTATTT---------------------
TTTATCAGCTGACGAATCTTCATTTGTTCTCTTGCAAA----CCGGCGTAGTCT--
TATATTACC---------CGAACTGTT-
TATCCAAAGCTAATTAA------------------------------CCTTTTT--
GGTGCTATCCGTCTGTATATTT-GGCTATAAAGGCAAT----ATCATGATACATGAAG-
TTCCCTTCTCATTATTTGCTC-------------------------------CGTGGAGAACTCATTGAG-
AAAATATATG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Beccariophoenix_madagascariensis_PL47"/>
---------------------------------------------------------------------------------------------------
TGAACTT----CTTA--------------------------------------------------
CCGTTTGATGCGTGCACACCACGCAGAAATATGGCTCCAGCATGTTCTATATAA--------------------------------------------------------
TGCGTAA-TATAACCA----TGGCCAATTAATCTTGCTCCCAT---------------
TATTATTATTATTATTATTATTATTATTATTA-------------
TCAGCTTGAGAATCTTCATTTGTTCTCTTGTAAA----CCGGCGTAGTCT--TATATATCA----
TTACCCGAACTGTT-TATCCGAAGCTAAGTAA------------------------------CCTTTTT--
GGTGCTATCCGTCTGTAAATTT-GGCTATAAAGACAAT----ATCATGATGCATAACG-
TTCCGTTCTGATTATTTGCTC-
TTTACCATGGTTTGGTGTGCTCTTTTCCACCGTGGAGAACTCACTGAGAAAAATATAT------------------------------------
</sequence>
<sequence>
<taxon idref="Cocos_nucifera"/>
GGGTCC----GCTA--------GATCTT--TTTCGTCTTCTG-
CAAACT---------------------------------------AAG------CACGAACTT----
CTTA--------------------------------------------------
CCGTTTGATGCGTGCACACCACGCAGAAATATGGCTCCAGCGTGTTCTATATAA--------------------------------------------------------
TGCGTAG-TATAACCA----
TGGCCAATTAATCTTGCTCCCATCATCATCATCATCATTATTATTAT--------------------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA----TCGGCGTAGTCT--
TGTATATATATCATTACCCCAACTGTT-
TATCCGAAGCTAATTAA------------------------------
CCTTTTTTTGGTGCTATCCGTCTGTAAATTT-GGCTATAAAGACAAT----ATCATGATACATAAAG-
TTCCCTTCTAACTATTTGCTC-
TTTACCCTGGTTTGGGA-----------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Desmoncus_orthacanthos_PL100"/>
GGGTCC----GCTTCATCGATSGGTCAT--
TTTCGTCTTCTGCCAAACTAACC-------------------------------ATTCGAGTGR---
CATGAACTT----CTCA--------------------------------------------------
CCATTTGATTCGTGCACACGATGCAGAAATATGGCGCCAGCGTGTTCTATATAATGCA----------------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTTCTCCCAT---------------
TATTATGATTATTATTT------------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA----CCGGCGTCGTCG--
TATATATCAATCATTACCCGAACTGTT-
TATCCAAAGCTAATCATCCTTTTTGGTGCTATCCGTCTGTATATTTGGCCTTTT--
GGTGCTATACGTCTGTATATTT-GGCTATGAAGGCAATATACATCATGATGGATAAAG-
TCCCCTTCTGATTATTTGCTC-TTTCCCGGTG-----------------------
GTAGAACTAATTGAGAAAAATATTTA--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_PL90"/>
GGGTCC----GCTTCATCGATCGGTCAT--TTTCGTCTTCTG-
CAAACTAACCATTGATCATTTTCGTCTTCTGCAAACTAACCATTCGAGTGG---CATGAACTT----
CTCA--------------------------------------------------
CCATTTGATTCGTGCACACGATGCAGAAATATGGCGCCAGCGTGTTCTATATAATGCA----------------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTTCTCCCAT---------------
TATTATGATTATTATTT------------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA----CCGGAGTCGTCG--
TATATATCAATCATTACCCGAACTGTT-
TATCCAAAACTAATCATCCTTTTAGGTGCTATCCGTCTGTATATTTGGCCTTTA--
GGTGCTATCCGTCTGTATATTT-GGCTATGAAGGCAATACATATCATGATGGATAAAG-
TACCCTTCTGATTATTTGCTC-TTTCCCGGTG-----------------------
GAAGAACTAATTGAGAAAAATATTTA--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_var_prunifer_PL115"/>
GGGTCC----GCTTCATCGATCGGTCAT--TTTCGTCTTCTG-
CAAACTAACC-------------------------------ATTCGAGTGG---CATGAACTT----
GTCA--------------------------------------------------
CCATTTGATTCGTGCACACGATGCAGAAATATGGCGCCAGCGTGTTCTATATAATGCA----------------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTTCTCCCAT---------------
TATTATGATTATTATTT------------------------
TTTATCAGCTTACGAATCTTCATTTGTTCWMTTGTAAA----CCGGCGTCGTCG--
TATATATCAATCATTACCCGAACTGTT-
TATCCAAAGCTAATCATCCTTTTAGGTGCTATCCGTCTGTATATTTGGCTTTTA--
GGTGCTATCCGTCTGTATATTT-GGCTATGAAGGCAATATATATCATGATGGATAAAG-
TCCCCTTCTGATTATTTGCTC-TTTCCCGGTG-----------------------
GAAGAACTAATTGAGAAAAATATTTA--CTCGCAGGAAT----------------------
</sequence>
<sequence>
<taxon idref="Elaeis_guineensis_PL124"/>
GGGTCC----GCTA--------GATCTT--TTTCGTCTTCTG-
CA-------------------------------------------------------G-ACTT----
CTTA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATATAA--------------------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTGCTCCCAT---------------
TATTATT------------------------------------------------
AATCTTCATTTGTTCTCTTGCAAA----CCGGCGTAGTCT--TATA---------TTACCCGAACTGTT-
TATCCAAAGCTAATTAA------------------------------CTTTTTT--
GGTGCCATCCGTCTGTATATTT-GGCTATAAAGGCAAT----ATCATGATACATAAAG-
TTCCGTTCCGATTATTTGCT-------------------------------CCGTGGTGAACTCATTGAG-
AAAATATATG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL110"/>
GGGTCC----GCTA--------GATCTT--TTTCGTCTTCTG-
CA-------------------------------------------------------G-ACTT----
CTTA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATATAA--------------------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTGCTCCCAT---------------
TATTATTATTATT----------------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGCAAA----CCGGCGGACTCT--TATA---------
TTACCCGAACTGTT-TATCCAAAGCTAATTAA------------------------------CTTTTTT--
GGTGCCATCCGTCTGTGTATCT-GGCTATAAAGGCAAT----ATCATGATACATAAAG-
TTCCGTTCTGATTATTTGCT-------------------------------CCGTGGTGAACTCATTGAG-
AAAATATATG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL87"/>
GGGTCC----GCTA--------GATCTT--TTTCGTCTTCTG-
CA-------------------------------------------------------G-ACTT----
CTTA--------------------------------------------------
CCATTTGATGCGTGCACACCACGCAGAAATATGGCACCAGCGTGTTCTATATAA--------------------------------------------------------
TGCATAA-TATAACCA----TGGCTAATTAATCTTGCTCCCAT---------------
TATTATTATTATT----------------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGCAAA----CCGGCGGACTCT--TATA---------
TTACCCGAACTGTT-TATCCAAAGCTAATTAA------------------------------CTTTTTT--
GGTGCCATCCGTCTGTGTATCT-GGCTATAAAGGCAAT----ATCATGATACATAAAG-
TTCCGTTCTGATTATTTGCT-------------------------------CCGTGGTGAACTCATTGAG-
AAAATATATG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Jubaea_chilensis_PL62"/>
---------------------------------------------------------------------------------------------------
CGAACTT----CTTA--------------------------------------------------
CCGTTTGATGCGTGCACACCACGCAGAAATMTGGCTCCAGCGTATTCTATATTA--------------------------------------------------------
TGCGTAA-TATAACCA----TGGCC---------------------------------
TATTATTATTATTATTATTATTWTTATTATTAT--------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA----CCGGCGTAGTCT--TACATATCA----
TTACCCGAACTGTT-TATCCGCAGCTAATTAA------------------------------CCTTTTT--
GGTGCTATCCGTCTGTAAATTT-GGCTATAAAGACAAT----ATC------------G-
TTCCGTTCTGATTATTTGTTC-TTTACCATGGTTTGGTGTGCTCTTTTCCACCGTGGAGAACTCATTGAG-
AAAATATATG--CTCGCAGGAAT----------------------
</sequence>
<sequence>
<taxon idref="Parajubaea_torallyi_PL64"/>
--------------------------------------------------------------------------------------------------
ATGAACTT----
CTTACCGTTTGATGCGTGCACACCACGCAGAAATATGGCTCCAGCGTATTCTATCCGTTTGATGCGTGCACACCACGCAGAAATATGGCTCCAGCGTATTCTATATAATGCGTAATCTATATAA----------------------------------------
TGCGTAA-TATAACCA----TGGCC---------------------------------
TATTATTATTATTATTAT-----------------------
TTTATCAGCTTACGAATCTTCATTTGTTCTCTTGTAAA----CCGGCGTAGTCT--TACATATCA----
TTACCCGAACCGTT-TATCCGCAGCTAATTAA------------------------------CTTTTTT-
GGGTGCTATCCGTCTGTAAATTT-GGCTATAAAGACAAT----ACC------------G-
TTCCGTTCTGATTATTTGCTC-TTTACCATGGTTTGGTGTGCTCTTTTCCACCGTGGAGAACTCATTGAG-
AAACTACATG--CTCGCAGGAATTACTACCGTTGCTCCAGCGAGG
</sequence>
<sequence>
<taxon idref="Reinhardtia_gracilis_var_rostrata_PL119"/>
GGGTCC----GCTA--------CATCTT--TTTCGTCTTCTG-
CAAACTAACC-------------------------------ATTCGAGTGA---CGTGAACTT----
CTTG--------------------------------------------------
TCATCAGAAGCGTGCACACCACGCACAAATATGGCCCCAGCATGTTATCTAAAA--------------------------------------------------------
TGCAAAA-TATAACCA----TGGCTAATTAATATTGCTCCCAT---------------
TATTTTTCTTTTTCTTT--------------------------TATCAGCTTACGAATTTTTATTATTTT-
CTTGTAAA----CCGGCGTGGTCT--TATATATCA-----------------T-
TACCCGAAGCTAATTAA------------------------------CATTTTT--
GGTGCTATCCGTCGGTATCTTT-GGCT---------TT---GTCAATGAAACATAAAA-
TTCCGTTCTGATTATTTGCTC-TTTT----------------------CCACCATGGAGAACTCATTGAG-
AAAATATATG--CTCGCAGGAATTACTACCGTTGCTCCAGCGCGG
</sequence>
<sequence>
<taxon idref="Reinhardtia_latisecta_PL120"/>
GGGTCG----GCTA--------GATCTT--TTTCTGTCTTTG-
TAAACTAAACTAACC--------------------------ATTCGAGTGG---CATGGACTT-------
A--------------------------------------------------
GCATTTGATGCGTGCACGACACGCAG-
ATTGTGGCACCAGCGTGTTCTATAAAA--------------------------------------------------------
TGCATAG-TATAGCCA----TGACCAATTAGTTTTGCTCCCAT---------------
TATTATTATTATTT-----------------------------
TATCAGCTTACGCATCTTCATTTGTTCTGTTGTAAATTAATCGACATAGTCT--TATACA-------
TTAGCCGAACCGTC-TATCCAAAGCAAATTTA------------------------------CCTTCCT--
GGTGCCTATTCGCATGATCTTT-GGCTGTAAAGGCATT--------------
ATATT-------------------G----
TTTAGCATGGTTTAGTGTGCTTTTTGACACCGTGGATAACTCATTGAG-
AAAATATATATGCCCGCAGGAATTACTACCGTTGCTCCAGCCAGG
</sequence>
<sequence>
<taxon idref="Roystonea_borinquena_PL122"/>
GGTTCC----GCTT--------GAYTT---TTTTTCATTCTG-
CAAACTAGACTAGCC--------------------------ATTCGAGGGG---CATGAACCC----
CTCT--------------------------------------------------
CCCTTTGATGCGTGCACAACACGCAGCAATGTGGCGCCAGCGTGTTCTATAAAA--------------------------------------------------------
TGCATAA-TATAACCA----
TGGCTAATTAA---------------------------------------------------------------------------------------------------------------------
GGTCT--TATACATCA-
TCATTATCCGAACCGTTACATCCAAAGCTAATTAA------------------------------
CCTTTTT----------TGGTGCGCATCTTT-GGCTCTAGAGGCATT----
ATCATGATACTTAAAACTTCCGTTTTGCTTATTTTCTC-
TTTATCATGGTTTGGTGTGCTCTTTTCCACCGTGGAGAACTCATTGAG-AAAATATATG--
CTCGCAG--------------------------
</sequence>
<sequence>
<taxon idref="Roystonea_oleracea_PL123"/>
GGTTCC----GCTT--------GATTTTTTTTTCGTCTTCTG-
CAAACTAGACTAGCC--------------------------ATTCGAGGGGCGGCATGAACCC----
CTTT--------------------------------------------------
CCCTTCGATGCGTGCACAACACGCAGCAATGTGGCGCCAGCGTGTTCTATAAAA--------------------------------------------------------
TGCATAA-TATAACCA----
TGGCTAATTAATC-----------------------------------------------------------------------------------------
TTGCTCTCTTGTAAA----CCGGCGTGGTCT--TATACATCA-
TCATTATCCGAACTGTTACATCCAAAGCTAATTTA------------------------------
CCTTTTT----------TGGTGCGCATCTTT-GGCTCTAAAGGCATT----
ATCATGATACTTAAAACTTCCGTTTTGCTTATTTGCTC-
TTTATCATGGTTTGGTGTGCTCTTTTCCACCGTGGAGAACTCATTGAG-AAAATATATG--
CTCGCAG--------------------------
</sequence>
<sequence>
<taxon idref="Syagrus_romanzoffiana_PL27"/>
GGGTCC----GCTA--------GATCTT--TTTCGTCTTCTG-
CAAACT---------------------------------------AAG------CATGAACTT----
STTA--------------------------------------------------
CCGTTTGATGCGTGCACACCACGCAGAAATATGGCTCCAGCGTGTTCTAT----------------------------------------------------------------------
TAACCA----TGGCCAATTAATCTTGCTCCCATCATCATCATCAT---
TATTATCATTAT-----------------------------
TTTATCAGCTTACGAACCTTCATTTGTTCTCTTGTAAA----CCGGCGTAGTCT--
TGTATATCA----------------TT-
TATCCGAAGCTAATTAA------------------------------CCTTTTT--G-------------
GTAAATTT-GGCTATAAAGACAAT----ATCATGATACATAAAG-TTCCCTTTTGATTATTTGCTC-
TTTACCCTGGTTTGGTGTGCTCCTTTCCACCGTGGAGAACTCATTGAG-AAAATATATG--
CTCGCAGGAATTACTACCGCTGCTCCAGCGAGG
</sequence>
</alignment>

<!-- The sequence alignment (each sequence refers to a taxon
above). -->
<!-- ntax=47
nchar=1517 -->
<alignment id="alignment4" dataType="nucleotide">
<sequence>
<taxon idref="Acrocomia_aculeata_PL75"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----TCAA--TTTTTTCCCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TCTGGTTTG-------ATTT----
ATGGCCA----------GATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AA----GAGTT---TGTAATGCATG-------
ATTT--------------
TAGTT----------------------------------------------------------------------
G-----CTTGTTTC--------------------------GGCATA----GAG--
TTCCATTTCTTTGGGTTTTAT----TATTT-------------------------TGAAGG---
TTATCAACCAAAG--------ATGATTATTC------CATTTCGTTGCAGAAGTCTCTT--
TGCCTTTTCA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----ATT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAGT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATATATTCAACAATA--
ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGTTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----ATAC---TCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTTT----TACCTAAATCAAC-------
ATATATAATAATATGATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGC-----
ATCGTTTC-----------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL76"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----TCAA--TTTTTTCCCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TCTGGTTTG-------ATTT----
ATGGCCA----------GATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AA----GAGTT---TGTAATGCATG-------
ATTT--------------
TAGTT----------------------------------------------------------------------
G-----CTTGTTTC--------------------------GGCATA----GAG--
TTCCATTTCTTTGGGTTTTAT----TATTT-------------------------TGAAGG---
TTATCAACCAAAG--------ATGATTATTC------CATTTCGTTGCAGAAGTCTCTT--
TGCCTTTTCA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----ATT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAGT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATATATTCAACAATA--
ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGTTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----ATAC---TCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTTT----TACCTAAATCAAC-------
ATATATAATAATATGATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGC-----
ATCGTTTC-----------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL77"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----TCAA--TTTTTTCCCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TCTGGTTTG-------ATTT----
ATGGCCA----------GATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AA----GAGTT---TGTAATGCATG-------
ATTT--------------
TAGTT----------------------------------------------------------------------
G-----CTTGTTTC--------------------------GGCATA----GAG--
TTCCATTTCTTTGGGTTTTAT----TATTT-------------------------TGAAGG---
TTATCAACCAAAG--------ATGATTATTC------CATTTCGTTGCAGAAGTCTCTT--
TGCCTTTTCA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----ATT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAGT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATATATTCAACAATA--
ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGTTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----ATAC---TCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTTT----TACCTAAATCAAC-------
ATATATAATAATATGATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGC-----
ATCGTTTC-----------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Acrocomia_crispa_PL116"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TCTGGTTTG-------ATTT----
ATGGCCA----------GATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AA----GAGTT---TGTAATGCATG-------
ATTT--------------
TAGTT----------------------------------------------------------------------
G-----CTTGTTTC--------------------------GGCATA----GAG--
TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------CCAAGG---
TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGAAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTC----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAGT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TTCGATATATTCAACAATA--
ATACACTTAATCAATGCAC----CGTTTCATTGAACTTGAAGCTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATGTTGACTGTTTACCAAGAA-------AATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---TCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC-------ATATATAATAATATGATTTAATTT----
TATGTTTTGC----TTGC----AACTTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------TATATATATATATATATATATATAGTGGCAAAACTAAAAC-----------
AACAAATT---------ACTCTT--C--TAAG-GAA
</sequence>
<sequence>
<taxon idref="Acrocomia_intumescens_PL78"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTT----ATAG-------
TCTTGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TCTGGTTTG-------ATTT----
ATGGCCA----------GATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AA----GAGTT---TGTAATGCATG-------
ATTT--------------
TAGTT----------------------------------------------------------------------
G-----CTTGTTTC--------------------------GGCATA----GAG--
TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------TCAAGG---
TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGAAGTCTCTT--
TGACTTTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAGT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATATATTCAACAATA--
ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---TCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC-------
ATATATAATAATATGATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGC-----
ATCGTTTC-----------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Aiphanes_horrida_PL112"/>
-GCCCGGTGAAGAAGCAGGTAT----CATC---TCTTACTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----ACAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTG----------GATATA---ACTGCATG----GTGA-----TGCTTGA----
TAATTACCAAT---------------AA----AAGTTTAATGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTA---AGCTC--------------AAGT--------TCTT---
TAGCTT----C---TCAGATATC-----TCTGTGTC-----------------------------
ATA----AAA--TTCCATTTCTTTGGG-TTTAT----TATTT-------------------------
CTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGAAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTT----
TTATC-----------------------------------------------------TTA----TTT---
ATAAATATATTT------GTACTGATG----AAATGAAAAGTTTATTAATCAACAAAAT--------
TAGACTCAGTCAATCA-------TCTTG---ATCA----------------------AATTAACAATA--
ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAGGATCGACC-
TAACCAAACCAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAGTTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CAATATC---------
CG-------AC---
TCTGTTGGTTTCGTGCACGCCTTCATCATTAACAGACG----------------------------
ATATGTTCAAA----ATTC----CA---TGGGCCAGATTCT----TACCTAAATCAAC---
ATATATAATAATATATGTGATTTAGTTT----TATGTTTTGC----TTGC----TACTTAA--ATA-----
TAAAATTAGGAAATCATTCTATATATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTG---ACT-CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT--------------------TATATATATAGTGGCAAAACTAAAAC-----------
AACAAATT---------ACTCTT--C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Aiphanes_minima_PL111"/>
TGCCCGGTGAAGAAGCAGGTAT----CATC---TCTTACTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----ACAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTG----------GATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTACCAAT---------------AA----AAGTTTAATGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTA---AGCTC--------------AAGT--------TCTT---
TAGCTTAATTC---TCAGTTATC-----TCTGTGTC-----------------------------
ATA----AAA--TTCCATTTCTTTGGG-TTTAT----TATTT-------------------------
CTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGAAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTT----
TTATC-----------------------------------------------------TTA----TTT---
ATAAATATATTT------GTACTGATG----AAATGAAAAGTTTATTAATCAACAAAAT--------
TAGACTCAGTCAATCA-------TCTTG---ATCA----------------------AATTAACAATA--
ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACCAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAGTTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CAATATC---------
CG-------AC---
TCTGTTGGTTTCGTGCACGCCTTCATCATTAACAGACG----------------------------
ATATGTTCAAA----AATC----CA---TGGGCCAGATTCT----TACCTAAATCAAC---
ATATATAATAATATATGTGATTTAGTTT----TATGTTTTGC----TTGC----TACTTAA--ATA-----
TAAAATTAGGAAATCATTCTATATATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTG---ACT-CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT--------------------TATATATATAGTGGCAAAACTAAAAC-----------
AACAAATT---------ACTCTT--C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Aiphanes_ulei_PL107"/>
TGCCCGGTGAAGAAGCAGGTAT----CATC---TCTTACTTTTT--ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTAAATTAAG---
T----TGCCTCT--ATCTCGAAC--AGTGCTTTAATTTGGTTTG-------ATTT----
ATGGCTR----------GATATA---ACTGCATG----ATAA-----TTACTAA----
TAAAAGTTTAA-----------------------------TGGAATGCATG-------
ATTTGGTTTTGGT----GTATCT----CTA---AGTTC--------------AAGT--------TCCC---
TAGC--AATTC---TCAGTTATC-----TCTGTGTC-----------------------------
ATA----AAA--TTCCATTTCTTTGGGTTTTAT----TATTT-------------------------
CTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGAAGTCTCTT--
TGCCTTTGAA---ATTGTTATTTT----
TTATC-----------------------------------------------------TTA----TTT---
ATAAATATATTT------GTACCGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAATCA-------TCTTG---ATCA-------AATTAATTACGATATATTCAACAATA--
ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACCGG----AAACAAGCATCTGATATTGACTGTTTACCGCCAAGAAAATTAA----TTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CAATATC---------
TGCATTGGTAC---TCTGTTGGTTTCGTGCACGCCTT---
CATTAACAGACG----------------------------ATATGTTCAAA----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC---ATATATAATAATACATGTGATTTAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAATTAAGAAATCATTCTAT----
GTCAC-----------
AT-----------------------------------------------------------------------------------------------------------------
TTTCTCT---TCATCTGT---------TTT----GCAGAAGAAAT--------------------
TATATATATAGTGGCAAAACTAAAAC-----------AACTAATT---------ACTCTT--C--
TAAAGAAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL102"/>
------GTGAAGAAGCAGGTAT----CATC---TCTTCCTTT----ATAG-------
TCGATCTGGTCTGT---TTC----TTAGCTTGGATTCAG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--ACAGC-----TTTGGTTTG-------ATTT----
ATGGCTAGATA------TATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTG---AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC-----------------------------
ATA----GAG--TTCTACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------
CGTTTCGTTGCAGAAGTCTCTTTGTGCCATTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGGTG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATATATTCAACAATA--
ATACGCTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAATTGTA---
ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---CCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC--ATATATAATAATAT-ATATGATTTAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----AAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT--------------------TATATATATAGTGGCAAAACTAAAACATT--------
AACAAATT--------ACTCTT---C--TATA-AGA
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL95"/>
-GCCCGGTGAAGAAGCAGGTAT----CATC---TCTTCCTTT----ATAG-------
TCGATCTGGTCTGT---TTC----TTAGCTTGGATTCAG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--ACAGC-----TTTGGTTTG-------ATTT----
ATGGCTAGATA------TATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTG---AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC-----------------------------
ATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------
CGTTTCGTTGCAGAAGTCTCTTTGTGCCATTTAA---ATTGTTRTTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGGTG----AAATGAAAAGTT---TAATCAACAAAAY--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATATATTCAACAATA--
ATACGCTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAATTGTA---
ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---CCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC--ATATATAATAATAT-ATATGATTTAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----AAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT--------------------TATATATATAGTGGCAAAACTAAAACATT--------
AACAAATT--------ACTCTT---C--TA------
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL104"/>
-----------------GGTAT----CATC---TCTTCCTTT----ATAG-------
TCGATCTGGTCTGT---TTC----TTAGCTTGGATTCAG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--ACAGC-----TTTGGTTTG-------ATTT----
ATGGCTAGATA------TATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTG---AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC-----------------------------
ATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------
CGTTTCGTTGCAGAAGTCTCTTTGTGCCATTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGGTG----AAATGAAAAGTT---TAATCAACATAAT--------
TAGACTCAGTCAAGCA-------TCTTGATGATCA--------AT----TACGATATATTCAACAATA--
ATACGCTTAAACTATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AAT-TATTGTA---
ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTACCTGCCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC--ATATATAATAATAT-ATATGATTTAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----AAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT--------------------TATATATATAGTGGCAAAACTAAAACATT--------
AACAAATT--------ACTCTT---C--TA------
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL85"/>
----------AGAAGCAGGTAT----CATC---TCTTCCTTT----ATAG-------
TCGATCTGGTCTGT---TTC----TTAGCTTGGATTCAG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--ACAGC-----TTTGGTTTG-------ATTT----
ATGGCTAGATA------TATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAATT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTG---AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC-----------------------------
ATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------
CGTTTCGTTGCAGAAGTCTCTTTGTGCCATTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGGTG----AAATGAAAAGTT---TAATCAACATAAT--------
TAGACTCAGTCAAGCA-------TCTTGATGATCA--------AT----TACGATATATTCAACAATA--
ATACGCTTAAACTATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AAT-TATTGTA---
ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---CCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC--ATATATAATAATAT-ATATGATTTAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----AAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT--------------------TATATATATAGTGGCAAAACTAAAACATT--------
AACAAATT--------ACTCTT---C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL86"/>
--------------------------CATC---TCTTCCTTT----ATAG-------
TCGATCTGGTCTGT---TTC----TTAGCTTGGATTCAG----GCAA-TTTTTTTCTCTAAATTAAG---
T----TGCCTCT--ATCTCGAAC--ACAGC-----TTTGGTTTG-------ATTT----
ATGGCTAGATA------TATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTG---AGTTCT--G---AAGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC-----------------------------
ATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------
CGTTTCGTTGCAGAAGTCTCTTTGTGCCATTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGGTG----AAATGAAAAGTT---TAATCAACATAAT--------
TAGACTCAGTCAAGCA-------TCTTGATGATCA--------AT----TACGATATATTCAACAATA--
ATACGCTTAAACTATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AAT-TATTGTA---
ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---CCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC--ATATATAATAATAT-ATATGATTTAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----AAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------
TTT------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL108"/>
TGCCCGGTGAAGAAGCAGGTAT----CATC---TCTTACTTT----ATGG-------
TCTGGTCGGTCTGT---TTC----TTAGCTTGGATTCAG----GCAG-TTTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAGC-----TATGTTTTG-------ATTT----
ATGGCTA----------GATGTA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTGG--AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTTTC-----TCCGTATC--------------------------
ATAATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGTAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------ATACGATA-GATCGATTCAACAATA--
ATACGCTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAATCAAACAAG----AAACAAGCATCTCATATTGACTGTTTACCAAGAAAAT---TAATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---ACTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC---ATATGTAATAATATATGTGATTTAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----GAAATCATTC----
TCTGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT----------------TTTATATATATATAGTGGCAAAACTAAAACATT--------
AACAAATT---------ACTCTT--C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL94"/>
-GCCCGGTGAAGAAGCAGGTAT----CATC---TCTTACTTT----ATGG-------
TCTGGTCGGTCTGT---TTC----TTAGCTTGGATTCAG----GCAG-TTTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAGC-----TTTGTTTTG-------ATTT----
ATGGCTA----------GATGTA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTGG--AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTTTC-----TCCGTATC--------------------------
ATACTA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGTAGTCTCTT--
TGCCTTTTAAAATATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATAGATTCAACAATA--
ATACGCTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAATCAAACAAG----AAACAAGCATCTCATATTGACTGTTTACCAAGAAAAT---TAATTAATTGTA---
ACCTAC----------CTGCTA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---ACTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TATCTAAATCAAC---ATATGTAATAATATATGTGATTAAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----GAAATCATTC----
TCTGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT--------TATATATATATATATATATATAGTGGCAAAACTAAAACATT--------
AACAAATT---------ACTCTT--C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL96"/>
------GTGAAGAAGCAGGTAT----CATC---TCTTACTTT----ATGG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAG-TTTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAGC-----TTTGTTTTG-------ATTT----
ATGGCTA----------GGTGTA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTG---AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTTTC-----TCCGTGTC--------------------------
ATAATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACAAAAG--------ATGATTATTC------CGTTTCGTTGCAGTAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATAGATTCAACAATA--
ATACGCTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAATCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAAAAT---TAATTAATTGTA---
ACCTGC--------------TA-TGTACTAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---ACTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAACATTAATTC----CA---
TGGTCCAGATTCTTAATTACCTAAATCAAC---ATATGTAATAATATATATGATTTAATTT----
TAGGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT--------TATATATATATATATATATATAGTGGCAAAACTCAAACATT--------
AACAAATT---------ACTCTT--C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL97"/>
--CCCGGTGAAGAAGCAGGTAT----CATC---TCTTACTTT----ATGG-------
TCTGGTCGGTCTGT---TTC----TTAGCTTGGATTCAG----GCAG-TTTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAGC-----TTTGTTTTG-------ATTT----
ATGGCTA----------GATGTA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTGG--AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTTTC-----TCCGTATC--------------------------
ATAATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGTAGTCTCTT--
TGCCTTTTAAAATATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT--GATA-GATCGATTCAACAATA--
ATACGCTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAATCAAACAAG----AAACAAGCATCTCATATTGACTGTTTACCAAGAAAAT---TAATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---ACTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC---ATATGTAATAATATATGTGATTAAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----GAAATCATTC----
TCTGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----GTAGAAGAAAT--
TTTATATATATATATATATATATATATAGTGGCAAAACTAAAACATT--------
AACAAATT---------ACTCTT--C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL101"/>
------------------GTAT----CATC---TCTTACTTT----ATGG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAGGCCAGCAG-TTTTTTTCTCTA----AAG---
T----TGCCTAT--ATCTCGAAC--AGAGC-----TTTGTTTTG-------
ATTTATACATGGCTA----------GATGTA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCTAGCTCTG---AGTTCT--G-----------TGT--------TCGC---
TAGCTT----C---TCAGTTTTC-----TCCGTGTC--------------------------
ATAATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGTAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAKACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATAGATTCAACAATA--
ATACGCTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAATCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAAAATTTATAATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---ACTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATCAAC---ATATGTAATAATATATGTGATTTAATTT----
TATGTTGTGC----TTGC----TACTTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------T-T----GCAGAAGAA--
TATATATATATATATATATATATATATATAGTGGCAAAACTAAAACATT--------
AACAAATT---------ACTCTT--C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL117"/>
----------AGAAGCAGGTAT----CATC---TCTTACTTT----ATGG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAGGCCAGCAG-TTTTTTTCTCTA----AAG---
T----TGCCTAT--ATCTCGAAC--AGAGC-----TTTGTTTTG-------
ATTTATACATGGCTA----------GATGTA---ACTGCATG----GTAA-----TGCTTGA----
TAATTGCTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCTAGCTCTG---AGTTCT--G-----------TGT--------TCGC---
TAGCTT----C---TCAGTTTTC-----TCCGTGTC--------------------------
ATAATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGCAGTAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTACTGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACGATAGATTCAACAATA--
ATACGCTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAATCAAACAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAAAATTTATAATTAATTGTA---
ACCTGC--------------TA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----GTAC---ACTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCAAAATCAAC---ATATGTAATAATATATGTGATTTAATTT----
TATGTTTTGC----TTGC----TACTTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCA-----------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Attalea_crassispatha_PL21"/>
-----------------GGTAT----CGTC---CCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCGG----GCAA--TTTTTTCCCTA----AAG---
G----TGCCTCT--ACCTCGAAC--AGAAC-----TTTGATTCG---ATCGATTT----
ATGGC-------------------------TACG----GTAA-----AGCTTGA----
TAATTACTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTATGGT----GTAGCT--CTCTG---AGATCT--G---
AGGGAGCAAGT---------------------------------------------------------------
TTG-------TTACAGCGTA----GAG--TTCCACTTCTTTGGGTTTTAT----TATCTT----GAT--
CGGCTAAATTT----TTAGGG---TTATCAATCACAG--------ATGATTATTA------
CGTCTCGTTGCACAAG--TCTCATTGCCTATTAAAA-ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATTAAGATATCT--GTACGTACTGAAG---AAAATGAAAGATT---TAATCAACAAAAT----
TAGCTAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----
ATTCAACAAGA--ATACACATAAACAATGCAC---AGTTTTCATTGAATTTGAAGCTC-AAAG----
GACC-TAACCAAACAAGA----AACAAGCATCTGATATTGACTGTTTACCAAGG--------
AAATTATTGTA---AACTGC--------------CA-TG---TAGATCTTGACATC----GT-----
CATCCGCATTAAT---TG-----GTAC---TCTGTTGGTTTCGTGCACGCCTTCA------
ACAGACA----------------------------ATACGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAATTCAAC-----------ATAATAATATGATTTAATTT----
TATGTTTTGCTTAATTAC----TACTTAA--ATA-----TAAAA----GAAATCATTA-
TTCAATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCCAACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT-----------------------TAATATAGTAGCAAAACTAAAAC-----------
AACA--------------------------------
</sequence>
<sequence>
<taxon idref="Bactris_brongniartii_PL83"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATCTGATCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATTCGG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTA----------GATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AA----AAGTT---TGTAATGCATC-------
ATTTGGTTTTGGT----GTAGTT----CTG---AGTTCT--G---AGGGAGCAAGCTAGT----
TCGCTTATAGCTA-TTTC---TCAGTTATC-----TCCGTGTT----CTAGTTGCTTA---
ATTGTCTCAGCATA----GAG--TTCCAATTCTTTAGGTTTCAT----
TATTT-------------------------TTAGGG---
TTATCAACCAAAGATGCATGCATGATTGTTC------CGTTTCATTGCAGAAGTCTCTT--
TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACTGATG----ACATAAAAAGTT---
TAATCAACAAAAT--------TAGACTCAGTCAATTAAGCATATTCTTG---ATCA--------AT----
TACGATATATTCAACAATA--ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-
AAAG----GACC-TAACCAAACAAG----AAACAAGCATCTGTTATTGACTGTTTACCAAGAA-------
AATTAATTGTA---ACCTGCTATATATATGTATATA-TG---TAGATCTTGACATC----AC-----
CATCCGCAT-------TGATAT-ATAC---
ACTGTCGGTTTCGTGCACGACTTCATTAT-------------------------------------
ATATGTTCAAC----ATTC----CA---TGGTCCGGATTCT----TACGTAAATCAAC---
ATATATAATAATATATATGATTTAATTTTAATTATGTTTTGC----TTGC----TACTTAAATATA-----
TAAAA----GAAATCGTTCAATATATGTCGC-----------
TT------------------------------------------------------------------------------------------
TTCCTGACT----CACA----TTTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------------------TATATGTATATAGTGGCAAAACTAAAACATC--------
AACAATTA-----AATTACTCTT---CT--AAAGAA
</sequence>
<sequence>
<taxon idref="Bactris_cf_maraja_PL113"/>
----------AGAAGCAGGTATCATGCATC---TCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TAAGCTTGGATTCAG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTA----------GATATA---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------TAATAAAAGTT---CGTAATGCATC---
ATTAATTTGGTTTTGGT----GTAGTT----CTG---AGTTCT--G---AGGGGGCAAGCTAGT----
TCGC---TAGCTA-ATTC---TCAGTTATC-----TCCGTGTT----
CTAGTTGCTTAAATATTGTCTCAGCATA----GAG--TTCCAATTCTTTAGGTTTTAT----
TATTT-------------------------TTAGGG---
TTACCAACCAAAGATGCATGCATGATTGTTC------CGTTTCATTGCAGAAGTCTCTT--
TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACTGATG----AAATAAAAAGTT---
TAATCAACAAAAT--------TAGACTCAGTCAAGCA----TATTCTTG---ATCA--------AT----
ATAT----ATTCAACAATA--ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-
AAAG----GACC-TAACCAAACAAG----AAACAAGCATCTGTTATTGACTGTTTACCAAGAA-------
AATTAATTGTA---ACCTGCTA--------TGTATA-TG---TAGATCTTGACATCATCGAT-----
CATCCGCAT-------TG-----ATAC---ACTGTTGGTTTCGTGCACGACTTCCTTA---
ACCGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCGGATTCT----TACGTAAATCAAC-------
ATATATAATAATATGATTTAATTTTAATTATGTTTTGC----TTGC----TACTTAA--ATA-----
TAAAA----GAAATCATTC----
TATGTCTTCCTTTTTTGACTTCTTCTCCTACCAAGCCTCGAACCCTCAACCTTGAGGATATTTCCTAACAAACATGCCATCAAGGTAGAGGAAGGTTGGTCATTCTATGTCTTCCTGACT----
CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------------------TATATGTATATAGTGGCAAAACTAAAACATC--------
AACAAATT-----AATTACTCTTGATCT--------
</sequence>
<sequence>
<taxon idref="Bactris_coloniata_PL98"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATCTGATCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATTCGG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTA----------GATATA---ACTGCATG----GTAATATAATGCTTGA----
TAATTACTAAT---------------AA----AAGTT---
TGTAATGCATCATTATTAATTTGGTTTTGGT----GTAGTT----CTGAGTAGTTCT--G---
AGGGAGCAAGCTTGT----TCGC---TAGCTA-ATTCTCATCAGTTATC-----TCCGTGTT----
CTAGTTGCTTA---ATTGTCTCAGCATA----GAG--TTCCAATTCTTTAGGTTTCAT----
TATTT-------------------------TTAGGG---
TTATCAACCAAAGATGCATGCATGATTGTTC------CGTTTCATTGCAGAAGTCTCTT--
TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACCGATG----AAATAAAAAGCT---
TAATCAACAAAAT--------TAGACTCAGTCAAGCATGCATATTCTTG---ATCA--ATATATAT----
ATAT----ATTCAACAATA--ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-
AAAG----GACC-TAACCAAACAAGAATTAAACAAGCATCTGTTATTGACTGTTTACCAAGAA-------
AATTAGTTGTA---ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----
CATCCGCAT-------TG-----ATAC---ACTGTTGGTTTCGTGCACGACTTCATTATA-
ACTGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCGGATTCT----TACGTAAATCAAC-------
ATATATAATAATATGATTTAATTTTAATTATGTTTTGC----TTTC----TACTTAA--ATA-----
TAAAA----GAAATCATTC----TATGTCGC-----------
TT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------------------TATATGTATATAGTGGAAAAACTAAAACATC--------
AACAAATT---------ACTCTTGATCTATAAAGAA
</sequence>
<sequence>
<taxon idref="Bactris_concinna_PL106"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATCTGATCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATTCGG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTA----------GATATA---ACTGCATG----GTAATATAATGCTTGA----
TAATTACTAAT---------------AA----AAGTT---
TGTAATGCATCATTATTAATTTGGTTTTGGT----GTAGTT----CTGGGTAGTTCT--G---
AGGGAGCAAGCTTGT----TCGC---TAGCTA-ATTCTCATCAGTTATC-----TCCGTGTT----
CTAGTTGCTTA---ATTGTCTCAGCATA----GAK--TTCCAATTCTTTAGGTTTCAT----
TATTT-------------------------TTAGGG---
TTATCAACAAAAGATGCATGCATGATTGTTC------CGTTTCATTGCAGAAGTYTCTT--
TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACCGATG----AAATAAAAAGTT---
TAATCAACAAAAT--------TAGACTCAGTCAAGCATGCATATTCTTG---ATCA--ATATATAT----
ATAT----ATTCAACAATA--ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-
AAAG----GACC-TAACCAAACAAGAATTAAACAAGCATCTGTTATTGACTGTTTACCAAGAA-------
AATTAGTTGTA---ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----
CATCCGCAT-------TG-----ATAC---ACTGTTGGTTTCGTGCACGACTTCATTATA-
ACTGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCGGATTCT----TACGTAAATCAAC-------
ATATATAATAATATGATTTAATTTTAATTATGTTTTGC----TTTC----TACTTAA--ATA-----
TAAAA----GAAATCATTC----TATGTCGC-----------
TT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------------------TATATGTATATAGTGGAAAAACTAAAACATC--------
AACAAATT---------ACTCTTGATCTATAAAGAA
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL92"/>
---CCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATTCAG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
GTGGCTA----------GATATGACTACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AAAATTAAGTT---TGTAATGCATC-------
ATTTGGTTTTGGT----GTAGTT----CTGAGTAGTTCC--G---AGGGAGCAAGCTAGTTCGATCGC---
TAACTA-ATTC---TCAGTTATC-----TCCGTGTT----CTAGTTGCTTA---
ATTGTCTCAGCATA----GAG--TTCCAATTCTTTAGGTTTTAT----
TATTT-------------------------TTACGG---TAGTCAACCAAAG----
ATGCATGATTGTTC------CGTTTCATTGCCGAAGTCTCTT--TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACTGATG----AAATTAAAAGTT---
TAATCAACAAAATTAGCTAGCTAGACTCAGTCAAGCATATATACTCTTG---ATCA--------AT----
ATAT----ATTCAACAATAATATACACTTAAACAATGCAC----
CATTTCATTGAATTTGAAGCTCAAAAG----GACC-TAACCAAACAAG----
AAACAAGCATCTTTTATTGACTGTTTACCAAGAAAAT---
TAATTAATTGTAATTACCTGCTATA-----------A-TG---TAGATCTTGACATC----AT-----
CATCCGCAT-------TG-----ATAC---ACTCTTGGTTTCGTGCACGACTTCATTA---
ACCGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCGGATTCT----TACGTAAATCAAC----
ATATATAATAATAATATGATTTAATTTTAATTATGTTTTGC----TTGC----TATTTAA--ATA-----
TAAAA----GAAATTAATCATTCTATGTCACATT--------
AT------------------------------------------------------------------------------------------
TTCCTGACTGAT-CACA-----TCTTCTCTTCATCATCTGT-----TAATTTT----
GCAGAAGAAAT------------------TTTATGTATATAGCGGCAAAACTAAAACATC--------
AACAA-TTAAATTAATTACTCTT--CTTATAAAGAA
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL93"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATTCAG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
GTGGCTA----------GATATGACTACTGCATG----GTAAT---GTGCTTGA----
TAATTACTAAT---------------AAAATTAAGTT---TGTAATGCATC-------
ATTTGGTTTTGGT----GTAGTT----CTGAGTAGTTCC--G---AGGGAGCAAGCTAGTTCGATCGC---
TAACTA-ATTC---TCAGTTATC-----TCCGTGTT----CTAGTTGCTTA---
ATTGTCTCAGCATA----GAG--TTCCAATTCTTTAGGTTTTAT----
TATTT-------------------------TTAGGG---TAGTCAACCAAAG----
ATGCATGATTGTTC------CGTTTCATTGCGGAAGTCTCTT--TGCATTTTAA---
ATTGTTATTTTAATTCTATC-----------------------------------------------------
TTTTATATAT---ATAAAGATATTT------GTACTGATG----AAATCAAAAGTT---
TAATCAACAAAAT----TAGCTAGACTCAGTCAAGCATATATACTCTTG---ATCA--------AT----
ATAT----ATTCAACAATAATATACACTTAAACAATGCAC----
CATTTCATTGAATTTGAAGCTCAAAAG----GACC-TAACCAAACAAG----
AAACAAGCATCTTTTATTGACTGTTTACCAAGAAAAT---
TAATTAATTGTAATTACCTGCTATA-----------A-TG---TAGATCTTGACATC----AT-----
CATCCGCAT-------TG-----ATAC---ACTCTTGGTTTCGTGCACGACTTCATTA---
ACCGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCGGATTCT----
TACGTAAATCAACATATATATATAATAATAATATGATTTAATTTTAATTATGTTTTGC----TTGC----
TATTTAA--ATA-----TAAAA----GAAATTAATCATTCTATGTCACATT--------
AT------------------------------------------------------------------------------------------
TTCCTGACTGAT-CACA-----TCTTCTCTTCATCATCTGT-----TAATTTT----
GCAGAAGAAAT------------------TTTATGTATATAGCGGCAAAACTAAAACATC--------
AACAA-TTAAATTAATTACTCTT--CTTATAAAGAA
</sequence>
<sequence>
<taxon idref="Bactris_major_PL114"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATCTGATCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATCCGG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTA----------GATATA---ACTGCATG----GTAATATAATGCTTGA----
TAATTACTAAT---------------AA----AAGTT---
TGTAATGCATCATTATTAATTTGGTTTTGGT----GTAGTT----CTGAGTAGTTCT--G---
AGGGAGCAAGCTTGT----TCGC---TAGCTA-ATTCTCATCAGTTATC-----TCCGTGTT----
CTAGTTGCTTA---ATTGTCTCAGCATA----GAG--TTCCAATTCTTCAGGTTTCAT----
TATTT-------------------------TTAGGG---
TTATCAACAAAAGATGCATGCATGATTGTTC------CGTTTCATTGCAGAAGTCTCTT--
TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACCGATG----AAATAAAAAGTT---
TAATCAACAAAAT--------TAGACTCAGTCAAGCATGCATATTCTTG---ATCAATATATATAT----
ATAT----ATTCAACAATA--ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-
AAAG----GACC-TAACCAAACAAGAATTAAACAAGCATCTGTTATTGACTGTTTACCAAGAA-------
AATTAGTTGTA---ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----
CATCCGCAT-------TG-----ATAC---ACTGTTGGTTTCGTGCACGACTTCATTATA-
ACTGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCGGATTCT----TACGTAAATCAAC-----
ATATATATAATAATATGATTTAATTTTAATTATGTTTTGC----TTTC----TACTTAA--ATA-----
TAAAA----GAAATCATTC----TATGTCGC-----------
TT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------------------TATATGTATATAGTGGAAAAACTAAAACATC--------
AACAAATT---------ACTCTTGATCTATAAAGAA
</sequence>
<sequence>
<taxon idref="Bactris_mexicana_PL88"/>
------GTGAAGAAGCAGGTATCATGCATC---TCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTCTTAATTAGCTTGGATTCAG----GCAATTTTTTTTCTCTA----AAG---
TTGCCTGCCTCC--ATCTCGAAC--AGAGC-----TTTAATTGGTTTG---ATTT----
ATGGCTA----------GATATG---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AAAATTAAGTT---TGTAATGCATG----
ATCATTTGGTT----------TAATT----TGGTGTAGTTCT--G---AGGGAGCAAGCTAGT----
TCGC---TAACTA-ATTC---TCAGTTATC-----TCCGTGTT----CTAGTTGCTTA---
ATTGTCTCAGCATA----GAG--TTCCAATTCTTTAGGTTTTAT----
TATTT-------------------------TTAGGG---
TTATCAACCAAAGATGCATGCATGATTGTTC------CGTTTCATTGCAGAAGTCTCTT--
TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACTGATG----AAATAAAAAGTT---
TAGTCAACAAAAT----TAGCTAGACTCAGTCAATTAAGCATATTCTTG---ATCA--------AT----
ATAT----ATTCAACAATA---------------ATGCAC----
CGTTTCATTGAATTTGAAGCTCAAAAG----GACCTTAACCAAACAAG----
AAACAAGCATCTGTTATTGACTGTTTACCAAGAAAAT---TAATTAATTGTAATTACCTGCTATA------
TATGTA-TG---TAGATCTTGACATC----AT-----CATCC-------------------------
ACTGTTGGTTTCGTGCACGACTTCATTA---ACCGACA----------------------------
ATATGTTCAAC----ATTC----CATATTGGTCCGGATTCT----TACGTAAATCAAC----
ATATATAATAATTATATGATTTAATTTTAATTATGTTTTGC----TTGC----TACTTAA--
ATATAAATTAAAA----GAAATTAATCATTCTATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACTGAT-CACA-----TTTTCTCT---TCATCTGTTAATATAATTTT----
GCAGAAGAACT------TATATGTATGTATGTATGTATRTAGCGGCAAAACTAAAACATC--------
AACAAATT-----AATTACTCTT--CTTAT------
</sequence>
<sequence>
<taxon idref="Bactris_militaris_PL109"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATTCAG----GCAA-TTTTTTTCTCTA----AAG---
TTGCCTGCCTCC--ATCTCGAAC--AGAGC-----TTTAATTGGTTTGATCATTT----
ATGGCTA----------GATATG---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AAAATTAAGTT---TGCAATGCATG----
ATCATTTGGTT----------TAATT----TGGTGTAGTTCT--G---AGGGAGCAAGCTAGT----
TCGC---TAACTA-ATTC---TCAGTCATC-----TCCGTGTT----CTAGTTGCTTA---
ATTGTCTCACCATA----GAG--TTCCAATTCTTTAGGTTTTAT----
TATTT-------------------------TTAGGG---
TTATCAACCAAAGATGCATGCATGATTGTTCCGTA--CGTTTCATTGCAGAAGTCTCTT--
TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACTGATG----AAATAAAAAGTT---
TAGTCAACAAAAT----TAGCTAGACTCAGTCAATTAAGCATATTCTTG---ATCA--------AT----
ATAT----ATTCAACAATA---------------ATGCAC----
CGTTTCATTGAATTTGAAGCTCAAAAG----GACC-TAACCAAACAAG----
AAACAAGCATCTGTTATTGACTGTTTACCAAGAAAAT---TAATTAATTGTAATTACCTGCTATA------
TATGTA-TG---TAGATCTTGACATC----AT-----CATCC-------------------------
ACTGTTGGTTTCGTGCACGACTTCATTA---ACCGACA----------------------------
ATATGTTCAAC----ATTC----CATATTGGTCCGGATTCT----TACGTAAATCAAC----
ATATATAATAATTATATGATTTAATTTTAATTATGTTTTGC----TTGC----TACTTAA--
ATATAAATTAAAA----GAAATTAATCATTCTATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACTGAT-CACA-----TTTTCTCT---TCATCTGTTAATATAATTTT----
GCAGAAGAACT------TATATGTATGTATGTATGTATATAGCGGCAAAACTAAAACATC--------
AACAAATT-----AATTACTCTT--CTTATAAAGAA
</sequence>
<sequence>
<taxon idref="Bactris_plumeriana_PL99"/>
------GTGAAGAAGCAGGTATCATGCATC---TCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATTCAG----GAAA-TTTTTTTCTCTA----AAG---
TTGCATGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTA----------GATATG---ACTGCATG----GTAA-----TGCTTGA----
TAATTACTAAT---------------AA----AAGTT---TGTAATGCATC---
GATCATTTGGTTTTGGT----GTAGTT----CTGAGTAGTTCTGAG---AGGGAGCAAGCTAGT----
TCGC---TGGCTA-ATTC---TCAGTTATC-----TCCGTGTT----CTAGTTGCTTA---
ATTGTCTCAGCATA----GAG--TTCCAATTCTTTAGGTTTTAT----
TATTT-------------------------TTAGGG---TTATCAACCAAAG----
ATGCATGATTGTTC------CGTTTCATTGCAGAAGTCTCTT--TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACTGATG----AAATAAGAAGTT---
TAATCAACAAAAT----TAGCTAGACTCAGTCAAGCA----TATTCTTG---ATCA--------AT----
ATAT----ATTCAACAATA--ATACACTTAAACAATGCAC----
CGTTTCATTGAATTTGAAGCTCAAAAG----GACC-TAACCAAACAAG----
AAACAAGCATCTGTTATTGACTGTTTACCAAGAA-------AATTAATTGTAATTACCTGCTATA------
TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------TG-----ATAC---
ACTGTTGGTTTCGTGCACGACTTCATTA---ACCGACA----------------------------
ATATGTTCAAC----ATTC----CA---TGGTCCGGATTCT----TACGTAAATCAAC---
ATATATAATAATA-ATATGATTTAATTTTAATTATGTTTTGC----TTGC----TACTTAA--ATA-----
TAAAA----GAAATTAATCATTCTATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACTGAT-CACA-----TTTTCTCT---TCATCTGT-----TAATTTT----
GCAGAAGAAAT--------------
TATATGTATATATATAGCGGCAAAACTAAAACATACATCAACAAATTAATT---------ACTCTT--
CTTATAAAGAA
</sequence>
<sequence>
<taxon idref="Bactris_sp_PL80"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATCTGATCTTACTTTATATATAG-------
TCTGGTCTG----TTAATTC----TTAGCTTGGATCCGG----GCAA-TTTTTTTCTCTA----AAG---
T----TGCCTCA--ATCTCGAAC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTA----------GATATA---ACTGCATG----GTAATATAATGCTTGA----
TAATTACTAAT---------------AA----AAGTT---
TGTAATGCATCATTATTAATTTGGTTTTGGT----GTAGTT----CTGAGTAGTTCT--G---
AGGGAGCAAGCTTGT----TCGC---TAGCTA-ATTCTCATCAGTTATC-----TCCGTGTT----
CTAGTTGCTTA---ATTGTCTCAGCATA----GAG--TTCCAATTCTTCAGGTTTCAT----
TATTT-------------------------TTAGGG---
TTATCAACAAAAGATGCATGCATGATTGTTC------CGTTTCATTGCAGAAGTCTCTT--
TGCATTTTAA---
ATTGTTATTTTAATTCGATC-----------------------------------------------------
TTT----TAT---ATAAAGATATTT------GTACCGATG----AAATAAAAAGTT---
TAATCAACAAAAT--------TAGACTCAGTCAAGCATGCATATTCTTG---ATCAATATATATAT----
ATAT----ATTCAACAATA--ATACACTTAAACAATGCAC----CGTTTCATTGAATTTGAAGCTC-
AAAG----GACC-TAACCAAACAAGAATTAAACAAGCATCTGTTATTGACTGTTTACCAAGAA-------
AATTAGTTGTA---ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----
CATCCGCAT-------TG-----ATAC---ACTGTTGGTTTCGTGCACGACTTCATTATA-
ACTGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCGGATTCT----TACGTAAATCAAC-----
ATATATATAATAATATGATTTAATTTTAATTATGTTTTGC----TTTC----TACTTAA--ATA-----
TAAAA----GAAATCATTC----TATGTCGC-----------
TT------------------------------------------------------------------------------------------
TTCCTGACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------------------TATATGTATATAGTGGAAAAACTAAAACATC--------
AACAAATT---------ACTCTTGATCTATAAAGAA
</sequence>
<sequence>
<taxon idref="Barcella_odora_PL121"/>
TGCCCGGTGAAGAAGCAGGTAT----CATC---TCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTACCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--GTCTCGAAT--AGAAC-----TTTGATTTG-------ATTT----
ATGGCTA----------GATATA---ACTGTATA----GTAA-----AGCTTGA----
TAATTACTAAT---------------AATTAAACGTT---CATAATGCATG-------
CTTTGGTTTTGGT----GTAGCT----TTG---AGTTCT--G---AGGGAGCAAGT--------TCCC---
TGGCTT----C---TCAGTTATC-----TCCGTGTC----CTAGTTGCTTG-------
TTTCAGCATA----GAG--
TTCCACTTCTTTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----ATTCAACAATA--
ACACACTTAAACAATGCAC----GGCTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACGAGAAATTAACAAGCATCTGACATTGACTGTTTACCAAGGA-----------ACTTGTA---
AACTGC--------------TA-TG---TAGATCTTGACATC----AT---CTCTTCCGCAT-------
TG-----GTAA---ACTGTTGGTTTCGTGCACGCCTTCA------
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TTGTCCAGATTCT----TACCTAAATCAAC-----------ATAATAATATGATTTAATTT----
TACGTTTTGC----TTAC----TAACTCA--ATA-----TAAAA----
GAAATCATTAATTCTATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCCTACT----CACA-----TTTTCTTTTCATCATCTGT---------TTT----
GCAGAAGAAAT-------------ATATATATATCTATATAGAGGCAAACCTAAAAC-----------
AACAAATT---------ACTCTT---C--TAAAGAA
</sequence>
<sequence>
<taxon idref="Beccariophoenix_madagascariensis_PL47"/>
-----------------GGTAT----CGTC---TCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
G----TGCCTCA--ATCTCGAAC--ATAAC-----TTTGATTTG-------ATTT----
ATGGCTA----------GATATA---ACCGTATG----GTAA-----AGCTTGA----
TAATTACTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----CTG---AGTTCT--G---AGGGAGCATGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC----CTAGTTGCTTG-------
TTTCAGCATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATCTT----GAT--
CGGCTGAATTT----TTAGGG---TTATCAATCACAG--------ATGATTATTA------
CGTTTCGTTGCACAAG--TCTCATTGCCTTTTAAAA-ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATCAAGATATCT------GTACTGATG---AAAATGAAAGGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----ATTCAACAATA--
ATACACTTAAACAATGCAC---AG-TTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAGA----AACAAGCCTCTGATATTGACTGTTGACCAAGGA-----------AATTGTA---
AACTGC--------------TA-TG---TAGATCTTGACATC----GT--CCACATCCGCAT-------
TG-----GTAC---TCCGTTGGTTTCGTGTACGCCTTCA------
ACAGA------------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAAATTAAC-------ATAATAATAT----GATTTAATTT----
TATGTTTTGC----TTAC----TACTTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCCAACT----
CAC-----------------------------------------------------------------------------
ATATAGTGGCAAAACTAAAAC-----------AACA--------------------------------
</sequence>
<sequence>
<taxon idref="Cocos_nucifera"/>
-------------------TAT----CGTC---TCTTCCTTC----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTATA----AAG---
G----TGCCTCT--ATCTGGAAAATAGAAC-----ATTGATTTG-------ATTT----
ATGGC-------------------------TATG----GTAA-----AGCTTGA----
TAATTACTAGT---------------AA----AAGTT---TGTAATGCATG-------
ACTTGGTTATGGT----GTAGCT----CTG---AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TGGGTTATC-----TCCGTGTC----CTAGTTGCTTG-------
TTTCAGCATATATAGAGGGTTCCACTTCTTTGGGTTTTAT----TATCTT----GAT--
CGGCTGAATTT----TTAGGG---TTATCAATCACAG--------ATGATTATTA------
CGTTTCGTTGCACAAG--TCTCATTGCCTATTAAAA-ATAACAATTTT----
CCATC-----------------------------------------------------TTA----TTT---
ATTGA--------------------------AAATGAAAGATT---TAATCAACAAAAT----
TAGCTGGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----
ATTCAACAATA--ATACACATAAACAATGCAC---AGTCTTCATTGAATTTGAAGCTC-AAAG----
GACC-TAACCAAACAAGA----AACAAGCATCTGATATTGACTGTTTACCAAGGA-----------
AATTGTA---AACTGC----------TATATA-TT---TAGATCTTGACATC----
GTCATCTCATCCGCATTAATATATG-----GTAC---TCTGTTGGTTCCGTGCACGCCTTC-------
ACAGGCG----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAATTCAAC-----------ATAATAATATGG-TTAATTT----
TATGTTTTGC----TTAC----TACCTAG--ATG-----TAAAA----GATACCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TCCCC-
ACTCGC---------------------------------------------------------------------------------
ATATAGGGGCAAA-CTAAACA----------CAATT--------------------------------
</sequence>
<sequence>
<taxon idref="Desmoncus_orthacanthos_PL100"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGTCCCT--ATCTCGACC--AGAAC-----TTTTGTTTG-------ATTT----
ATGGCAAGCTAGATGTCGATATA---ACTGCATG----ATAA-----TGCTTGA----
TAATTACTAAT---------------AA----AAGTC---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----TTG---AGTTCT--G---AGGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTATC-----------------------------
GTA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGTAGAAGTCTCTT--
TGCC-TTTAA---ATTGTTATTTT----
CGTTCTTAA-------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTGCCGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCC------ATAG----TACGATATATTCAACAATA--
ATACACTTAAACAATGCACCGTACGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAATAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTAATCGCA---
ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----ATAC---TCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATACGTTCAAC----ATTC----CA---
TAGTCCAGATTCT----TACGTAAATCAAC-------
GTATATAATAATATGATTTAATTAATTTTATGCTTTGC----TGGC----TACTTAA--ATA-----
TAAAA----GTAATCATTC----TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACTCATGCACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------------------TATATATATGCAGTGGCAAAACTAAAACAACA-------
AATTAATT--------ACTCTTAT-C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_PL90"/>
TGCCCGGTGAAGAAGCAGGTATCATGCATC---TCTTACTTT----ATAG-------
TCTAGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGACTCT--ATCTCGACC--AGAGC-----TTTGGTTTG-------ATTT----
ATGGCTAGCTAGATATCGATATA---ACTGGATG----ATAA-----TTATTGA----
TAA--------------------------------------------AATG-------
ATTTGGTTTTGGTGTACGTATCT----CTG---AGTTCT--G---AGGGAGCAAGTTCGA----TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC-----------------------------
GTA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TGATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGTAGAAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTT----
CGTTCTTAA-------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTGCCGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA------ATAT----TACGATATATTCAACAATA--
ATACACTTAAACAATGCACCGTACGTTTCATTGAATTTGAAGCTC-AAAG----GACG-
TAACCAAATAAG----AAACAAGCATCTGATATTGACTGTTTACCAAGAA-------AATTACTCGCA---
ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----ATAC---TCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TAGTCCAGGTTCT----TACGTAAATCAAC-------GTATATAATAATATGATTTAATTT----
TATGCTTTGC----TGGC----TACTTAA--ATA-----TAAAA----GTAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACTCATGCACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT----TATATATATATATATATATGCATGCAATGGCAAAACTAAAACCACA-------
AATTAATT--------ACTCTTAT-G--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_var_prunifer_PL115"/>
-GCCCGGTGAAGAAGCAGGTATCATGCAAC---TCTTACTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGACTCT--ATCTCGACC--AGAGC-----TTTGGTTTT-------ATTT----
ATGGCTAGCTAGATATCGATATA---ACTGCATG----ATAA-----TGCTTGA----
TRATTACTAAT---------------AA----AAGTC---TGTAATGCATG-------
ATTTGGTTTTGGTGTACGTAGCT----CTG---AGTTCT--G---AGGGAGCAAGTTCGA----TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC-----------------------------
GTA----GAG--TTCCACTTCTTTGGGTTTTAT----TATTT-------------------------
TTAAGG---TTATCAACCAAAG--------ATGATTATTC------CGTTTCGTTGTAGAAGTCTCTT--
TGCCTTTTAA---ATTGTTATTTT----
CGTTCTTAA-------------------------------------------------TTA----TTT---
ATAAAGATATTT------GTGCCGATG----AAATGAAAAGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA------ATAT----TACGATATATTCAACAATA--
ATACACTTAAAYAATGCACCGTACGTTTCATTGAATTTGAAGCTC-AAAG----GACS-
TAACCAAATAAG----AAACAAGCATCTGATATTGACTGTTTACCAAAAA-------AATTAATCGCA---
ACCTGC----------TATATA-TG---TAGATCTTGACATC----AT-----CATCCGCAT-------
TG-----ATAC---TCTGTTGGTTTCGTGCACGCCTTCATTA---
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TAGTCCAGATTCT----TACGTAAATCAAC-------GTATATAATAATATGATTTAATTT----
TATGCTTTGC----TGGC----TACTTAA--ATA-----TAAAA----GTAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCTGACTCATGCACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGAAGAAAT------------TATATATATATATATGCAGTGGCAAAACTAAAACAACA-------
AATTAATT--------ACTCTTAT-C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Elaeis_guineensis_PL124"/>
--------------------AT----CATC---TCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTACCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TTTGATTTG-------ATTT----
ATGGCTA----------GATATA---ACTGTATA----GTAA-----AGCTTGA----
TAATTACTAAT---------------AATTAAACGTT---GGTAATGCATG-------
CTTGGGTTTTGGT----GTAGCT----TTG---AGTTCC--G---AGGGAGCAAGT--------TCCC---
TAGCTT----C---TCGGTTATCTCATATCCGTGTC----CTAGTTGCTTG-------
TTTCAGTATA----GAG--
TTCCACTTCTTTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----ATTCAACAATA--
ATACACTTAAACAATGGAC----AGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAGAAATTAACAAGCATCTGACATTGACTGTTTACCAAGGA-----------ACTTGTA---
AACTGC--------------TA-TG---TAGATCTTGACATC----AT-----CGTCCGCGT-------
TG-----GTAG---ACTGTTGGTTTCGTGCACGACTTCA------
ACAGACA----------------------------ATATGTTCAAC----AATC----CA---
TTTTCCAGATTCT----TACCTAAATCAAC-----------ATAATAATATGATTTAATTT----
TACGTTTTGC----TTAC----TAACTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCCGACT----CACA-----TTTTCTTT---TCATCTGT---------TTT----
GCAGAAGATAT---------ATATATATATATGTATATATAGTGGCAAACCTAAAAC-----------
AACAAGTT--------GCTCTT---C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL110"/>
TGCCCGGTGAAGAAGCAGGTAT----CATC---TCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTACCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TTTGATTTG-------ATTT----
ATGGCTA----------GATATA---ACTGTATA----GTAA-----AGCTTGA----
TAATTACTAAT---------------AATTAAACGTT---GGTAATGCATG-------
CTTGGGTTTTGGT----GTAGCT----TTG---AGTTCC--G---AGGGAGCAAGT--------TCCC---
TAGCTT----C---TCGGTTATC-----TCCGTGTC----CTAGTTGCTTG-------
TTTCAGTATA----GAG--
TTCCACTTCTTTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----ATTCAACAATA--
ATACACTTAAACAATGGAC----GGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAGAAATTAACAAGCATCCGACATTGACTGTTTACCAAGGA-----------ACTTGTA---
AACTGC--------------TA-TG---TAGATCTTGACATC----AT-----CGTCCGCGT-------
TG-----GTAG---ACTGTTGGTTTCGTGCACGACTTCA------
ACAGACA----------------------------ATATGTTCAAC----AATC----CA---
TTTTCCAGATTCT----TACCTAAATCAAC-----------ATAATAATATGATTTAATTT----
TACGTTTTGC----TTAC----TAACTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCCGACT----CACA-----TTTTCTTT---TCATCTGT---------TTT----
GCAGAAGATAT---------ATATATATATATGTATATATAGTGGCAAACCTAAAAC-----------
AACAAGTT--------ACTCTT---C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL87"/>
----------AGAAGCAGGTAT----CATC---TCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTACCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TTTGATTTG-------ATTT----
ATGGCTA----------GATATA---ACTGTATA----GTAA-----AGCTTGA----
TAATTACTAAT---------------AATTAAACGTT---GGTAATGCATG-------
CTTGGGTTTTGGT----GTAGCT----TTG---AGTTCC--G---AGGGAGCAAGT--------TCCC---
TAGCTT----C---TCGGTTATC-----TCCGTGTC----CTAGTTGCTTG-------
TTTCAGTATA----GAG--
TTCCACTTCTTTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----ATTCAACAATA--
ATACACTTAAACAATGGAC----GGTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAGAAATTAACAAGCATCCGACATTGACTGTTTACCAAGGA-----------ACTTGTA---
AACTGC--------------TA-TG---TAGATCTTGACATC----AT-----CGTCCGCGT-------
TG-----GTAG---ACTGTTGGTTTCGTGCACGACTTCA------
ACAGACA----------------------------ATATGTTCAAC----AATC----CA---
TTTTCCAGATTCT----TACCTAAATCAAC-----------ATAATAATATGATTTAATTT----
TACGTTTTGC----TTAC----TAACTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCCGACT----CACA-----TTTTCTTT---TCATCTGT---------TTT----
GCAGAAGATAT---------ATATATATATATGTATATATAGTGGCAAACCTAAAAC-----------
AACAAGTT--------ACTCTT---C--TAAA-GAA
</sequence>
<sequence>
<taxon idref="Jubaea_chilensis_PL62"/>
-----------------GGTAT----CATC---TCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTA----
AAGGGAC----TGCCTCTAGATCTCGAACATAGAACTTAA-TTTGATTTG-------ATTT----
ATGGC-------------------------TATG----GTAA-----
AGCTTGATAATTAATTACTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTCGGTTTTGGT----GTAGCT----GTG---AGTTCT--G---AGGGAGCATGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC----CTAGTTGCTTG-------
TTTCAGCATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATCTT----GAT--
CGGCTGAATTT----TTAGGG---TTATCAATCACAG--------ATTATTATGA------
CGTTTCGTTGCACAAG--TCTCATTGCCTTTTAAAA-ATTGTTATATT----
CGATC-----------------------------------------------------TTA----TTT---
ATAAAGATATCT------GTACTGATG---AAAATGAAAGGTT---TAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----ATTCAACAATA--
ATACACTTAAACAATGCGC---AGTTTTCATTGAATTTGAAGCTC-AAAG----GACC-
TAACCAAACAAGA----AACAAGCATCTGATATTGACTGTTTACCAAGGA-----------AATTGTA---
AACTGC--------------TA-TG---TAGACCTTGACATC----GT-----CATCCGCAT-------
TG-----GTAC---TCTGTTGGTTTCGTGCACGCCTTCA------
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATTCT----TACCTAATTCAAC-----------ATAATAATATGATTTAATTT----
TATGTTTTGC----TTAC----TACTTAA--ATA-----TAAAA----
GAAATCATTAATTCTATATCAC--ATGCATTA-
AA------------------------------------------------------------------------------------------
TTCACGACT----CACATTAA-TTTTCTCT---TCATCTGT---------
TTTAATTGCAGAAGAAAT-----------------------
TAATATAGTGGCAAAACTAAAGC-----------AACA--------------------------------
</sequence>
<sequence>
<taxon idref="Parajubaea_torallyi_PL64"/>
-----------------GGTAT----CATC---TCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCCCTA----AAG---
G----TGCCTCTGGATCTCGAACATAGAAC-----TTTGATTTG-------ATTT----
ATGGC-------------------------TATG----GTAA-----AGCTTGA----
TAATTACTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTCGGTTTTGGT----GTAGCT----GTG---AGTTCT--G---AGGGAGCATGT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTGTC----CTAGTTGCTTG-------
TTTCAGCATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATCTT----GAT--
CGGCTGAATTTTTAATTAGGGTTATCATGAATCACAG--------ATGATTATTA------
CGTTTCGTTGCACGAG--TCTCATTGCCTATTGAAA-ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATTAAGATATCTGTATACGTACTGATCATGAAAATGAAAGATT---TAATCAACAAAAT----
TGGCTAGACTCAGTCAGGCA-------TCTTG---ATCG--------AT----TACG----
ATTCAACAATA--ATACACATAAACAATGCAC---AGTTTTCATTGAATTTGAAGCTC-AAAG----
GACC-TAACCCAACAAGA----AACAAGCATCTGATATTGACTGTTTACCAAGGA-----------
AATTGTA---AACTGC----------TATATA-TG---TAGATCTTGACATC----GT-----
CATCCGCAT-------TG-----GTAC---TCTGTTGGTTCCGTGCACGCCTTCA------
ACAGACG----------------------------ATATGTTCAAC----GTTC----CA---
TGTTCCAGATTCT----TACCTAATTCAAC-----------ATAATAATATGATTTAATTT----
TATGTTTTGC----TTACTGCGTACTTAA--ATA-----TAAAA----GAAATCATTC----
TATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCCAACT----
CAC-----------------------------------------------------------------------------
ATATAGTGGCAAAACTAAAAC-----------AACA--------------------------------
</sequence>
<sequence>
<taxon idref="Reinhardtia_gracilis_var_rostrata_PL119"/>
------GTGAGGAAGCAGGTAT----CATC---TCTTCCTTC----RTAG-------
TTTGGTCTG----T---CAC----TCCCCTTGRATTCAG----GCAA--TTTTTTCTCTA----AAG---
T----TGCCTCT--ATCTCGAAC--AGAAC-----TTTGATTTG-------ATTT----
ATGGCTA----------GATATA---ACTGCATG----GTAA-----GGCTTGG----
TAATTACTAAT---------------AA----AAATT---TGCAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----TTG---CGGTCT--G---AAGGAGCAAGT--------TCGC---
TAGCTT----C---TCAGTTA-C-----TCCGTCTT----CTAGTTGCTTG-------
TTTCAACATA----GAG--TTCCACTTCTTTGGGTTTTAT----TGTTTT--TTGAT--
CGGCTGAATTT----TAAGGG---TTTCCAATCACAG--------ATGATTATTG------
CGTTTCCTTGCAGAAG--TCTCATTGCCTTTTAA---ATTGTTATTTT----
CGATCATTTTTTGTTTTTCGTTTTTGTTTAAACGGATATATTAAATTAATTTTCGATCTTA----TTT---
ATATAGATATTT------GCACTGATG----AAATGAAAAGTT---GAATCAACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TATG----ATTCAACAATA--
ATACACTGAAACAATGCAC---AG-TTTCATTGAATTTGAAGATCAAAAA----AACC-
TAACCAAACAAGAAATTAACAAGCATCCGATATTGACTGTTTACCAAGGA-----------AATAGTA---
AACTGC--------------TA-TG---TAGATCTTGACGAA----GT-----CATCCGCAT-------
TG-----GTAC---TCTGTTGGTTTCGTGCACGGCTTC-------
ACAGACA----------------------------ATATGTTCAAC----ATTC----CA---
TGGTCCAGATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Reinhardtia_latisecta_PL120"/>
TGCCCGGTACGGAAGCGGGTAT----CATC---TCTTCCATT----
ATAGTAATTAATTTGGTCTA----T---TTC----TTAGCTTGGATTCAG----
GCAATTTGTTCTATCTG----AAG---T----TACCTCT--TTCTCGAAC--AGAAC-----
TTTGATTTG-------ATTT----GTGGCCGGCTA------GATATA---ACTGCATG----GCAA-----
AACTTGA----TAAATA--ACTAATAACAATCATTTTAA----ATGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTGGCT----CTG---AGGTCT--GATGAAGGAGCTAGT--------TCGC---
TGGTTT----C---TCGCTCTTC-----TCCACGTC----CTAGTTGCTTG-------
TTTCAGCAGA----GAG--TTCCACTTCTTTGGTCTTCATTAATTATTAATTTTTCT--
AAGCTGAATTT----TTAGGG---TTATTAATCATGG--------TTGACTATTA------
CGTTTCCTTGCAGAAG--TCTCATTTCCTTTTAA---GTTGTCATTTT----
CGATC-----------------------------------------------------TTA----
TTTATAATAAATATATTT------ATACTGATG----AAATGAAATGTT---
TAATCAACAAAAT--------TAGACTCGGTCAAGCA-------TCTTT---ATCG--------AT----
TATG----ATTCAGC-----CATACGCCTAAACAATGCAC---AG-
TTTCATTGAATTTTGAAGCTGAAAG----GACC-TAACCAAACAAGA----
AACAAGCATCTAATATTGACTGTTTGCCAAGGA-----------AATTTTA---ACCTGC----------
TATATATTG---TAGATCTTGACGTC----GT-----CATCCGCAT-------TG-----GTAC---
TTTGTTGGTTTCTTACACGCCTTCA------ACAGACA------------------
ATATATATATTAATATTCAAC----ATTC----CG---TGATCCATATTCT----
TTCCTGAATCGTC-----------ATCATAATATGATTTAATTT----TATGTTTTGC----TTAC----
TACTTAA--TTA-----TAAAA----GAAATCATTC----CGTGTCAC---------
AGGT------------------------------------------------------------------------------------------
TCCCA-GCT----CGCA-----TTTTTTTT---TCATCTGC---------TTT----
GCAGGAGAA-------------------------ATATATAGTGGCAAAAATAAAAC-----------
AAGAAATT--------AGTCTT--C---TAATTAA-
</sequence>
<sequence>
<taxon idref="Roystonea_borinquena_PL122"/>
TGCCCGGTAAGAAAGCGGGTATATATCATC---TCTTCCTTT----ATTG-------
TTTGGTCTG----T---TTC----TTAGGTTGGATTCAG----GCAA--
TTTTTTCT------------------------------CAGAGC------------
TTTGATTTG-------ATTT----GTGGCTA----------GATATA---ACCGTATGCATGGTAA-----
AGCTTGA----TAAGTAGTGCTCATAACAATCATTTTAA----AAGTT---AGTAGTCCATG-------
ATTTGGTTTCGGT----GTAGCT----CTG---AGGTCT--G---AGAGGGCAAGT--------TCGC---
TGACTT----C---TCGGTTATC-----TCCATGTCCTAGCT-GTTGCTTC-------
TTTCAGCATA----GAG--TTCTATTTCTTTGGGCTGTAT----TATTTT----GAT--
CGGCTGAATTT----TTAGGG---TTATTAATCACAG--------
ATGACAATTACGTATACGTTTCCTTGCAGAAT--TCTCATTTCCTTTTAA---ATTGTTTTTTT----
CGTTC-----------------------------------------------------TTA----TTT---
GTAAATATATTT------ATACTGATG----AAATAAAAGGTT---TGATTGACAAAAT--
TAGACTCAGACTCAGTCAAGCA-------TCTTT---GTCA--------AT----CATG----
ATTCAAC-----CATACACTTAAACAATGCAC---AG-TTTCATTGAATTTTGAAGCGGAAAC----
GACC-TAGAAAAACAAGA----AACAAGCATCTAATATTGACTGTTTACCGAGGA-----------
AATTGTA---AATTGC--------------TA-CG---TAGATCTTGACATC----AT-----
CATCTCCAT-------TG-----GTAC---TCTGTTGGTTTCGTGCACGCTTTCA------
ACAAGCA--------------------ATATATATATATATTCAAC----ATTCCATGCA---
TGACCCAGATTCT----TAACTAAATCAAC-------ATAATAATATATATGATTTAATTT----
TACGTTTTGC----TTGC----TA---AA--ATA-----TAAAA----GAAACCATTC----
TATGTCAC----------
AAT------------------------------------------------------------------------------------------
TCCCT-ACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGACAAA---------------------------AAATAGCGACAAAAATAAAAC-----------
AACAAATT--------AGTCTT--C---TAATGAA-
</sequence>
<sequence>
<taxon idref="Roystonea_oleracea_PL123"/>
TGCCCGGTAAGAAAGCAGGTAAATATCATC---TCTTCCTTT----ATTG-------
TTTGGTCTG----T---TTC----TTAGGTTGGATTCAG----GCAA--
TTTTTTCT------------------------------CAGAGC------------
TTTGATTTG-------ATTT----GTGGCTA----------GATATA---ACCGTATGCATGGTAA-----
AGCTTGA----TAAGTAGTACTCATAACAATCATTTTAA----AAGTT---AGTAGTCCATG-------
ATTTGGTTTCGGT----GTAGCT----CTG---AGGTCT--G---AGGGGGCAAGT--------TCGC---
TGATTT----C---TCGGTAATC-----TCCATGTC----CTAGTTGCTTC-------
TTTCAGCATA----GAG--TTCCATTTCTTTGGGCTGTAT----TATTTT----GAT--
CGGCTGAATTT----TTAGGG---TTATCAATCACAG--------
ATGACAATTACGTATACGTTTCCTTGCAGAAT--TCTCATTTCCTTTTAA---ATTGTTTTTTT----
CGTTC-----------------------------------------------------TTA----TTT---
GTAAAGATATTT------ATACTGATG----AAATAAAAGGTT---TAATTGACAAAAT--------
TAGACTCAGTCAAGCA-------TCTTT---GTCA--------AT----CATG----ATTCAAC-----
CATACACTTAAACAATGCAC---AG-TTTCATTGAATTTTGAAGCGGAAAC----GACC-
TAGAAAAACAAGA----AACAAGCATCTAATATTGACTGTTTACCGAGGA-----------AATTGTA---
AATTGC--------------TA-CG---TAGATCTTGACATC----AT-----CATCTACAT-------
TG-----GTAC---TCTGTTGGTTTCGTGCACGCTTTCA------
ACAAGCAATATATATATATATATATATATATATATATATATTCAAC----ATTCCATGCA---
TGACCCAGATTCT----TAACTAAATCAAC-------ATAATAATATGTATGATTTAATTT----
TACGTTTTGC----TTGC----TA---AA--RTA-----TAAAA----GAAACCATTC----
TATGTCAC----------
AAT------------------------------------------------------------------------------------------
TCCCT-ACT----CACA-----TTTTCTCT---TCATCTGT---------TTT----
GCAGACAAA---------------------------AAATAGCGACAAAAATAAAAC-----------
AACAAATT--------AGTCTT--C---TAATGAA-
</sequence>
<sequence>
<taxon idref="Syagrus_romanzoffiana_PL27"/>
-----------------GGTAT----CGTC---TCTTCCTTT----ATAG-------
TCTGGTCTG----T---TTC----TTAGCTTGGATTCAG----GCAA--TTTTTTCTCTA----AAG---
G----TGCCTCT--ATCTCGAACATAGAAC-----TTTGATTTG-------ATTT----
ATGGC-------------------------TATG----GTAA-----AGCTTGA----
TAATTACTAAT---------------AA----AAGTT---TGTAATGCATG-------
ATTTGGTTTTGGT----GTAGCT----GTG---AGTTCT--G---AGGGAGCATRT--------TCGC---
TAGCTT----C---TCAGTTATC-----TCCGTTTC----CTAGTTGCTTG-------
TTTCAGCATA----GAG--TTCCACTTCTTTGGGTTTTAT----TATCTT----
GATATCGGCYGAATTT----TTAGGG---TTATCAATCACAG--------ATTATTRTTA------
CGTTTCGTTGCACAAG--TCTCATTGCCTATTAAAA-ATTGTTATTTT----
CGATC-----------------------------------------------------TTA----TTT---
ATTAAGATATCT--GTACGTACCGATG---AAAATGAAAGATT---TAATCAACAAAAT----
TAGGTAGACTCAGTCAAGCA-------TCTTG---ATCA--------AT----TACG----
ATTCAACAATA--ATACACATAAACAATGCAC---AGTTTTCATTGAATTTGAAGCTC-AAAG----
GACC-TAACCAAACAAGA----AACAAGCATCTGATATTGACTGCTTACCAAGGA-----------
AACTGTA---AACTGC----------TATATA-TG---TAGACCTTGACATC----GT-----
CATCCGCAT-------TG-----GTAC---TCTGTTGGTTCCGTGCACGCCTTCA------
ACAGACG----------------------------ATATGTTCAAC----ATTC----CA---
AGGTCCAGATTCT----TACCTAATTCAAC-------ATAATAATAT----GATTTAAATT----
TATGTTTTGC----TTAC----TACTTAA--ATA-----TAAAA----GAAATCATTC--
TATATGTCAC-----------
AT------------------------------------------------------------------------------------------
TTCCCAACT----
CAC-----------------------------------------------------------------------------
ATATAGTGGCAAAACTAAAAC-----------AACA--------------------------------
</sequence>
</alignment>

<!-- The sequence alignment (each sequence refers to a taxon
above). -->
<!-- ntax=47
nchar=1067 -->
<alignment id="alignment5" dataType="nucleotide">
<sequence>
<taxon idref="Acrocomia_aculeata_PL75"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTA-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGACTTTTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACGTCAATCATGTAAATGCT-
ATCTGGTATGCTGTTGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGCATATCAATTATCAAGTACTTATTTATGTTTC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAAAGCGAAGAATGTTTTTTGATGTCGGTCTTGTTGATATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL76"/>
-TTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTA-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGACTTTTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACGTCAATCATGTAAATGCT-
ATCTGGTATGCTGTTGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGCATATCAATTATCAAGTACTTATTTATGTTTC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAAAGCGAAGAATGTTTTTTGATGTCGGTCTTGTTGATATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL77"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTA-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACGTCAATCATGTAAATGCT-
ATCTGGTATGCTGTTGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGCATATCAATTATCAAGTACTTATTTATGTTTC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAAAGCGAAGAATGTTTTTTGATGTCGGTCTTGTTGATATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Acrocomia_crispa_PL116"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGTCTGAATTATATTTTTATTTAG-
TTCATTTA-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGGAACTTGGAGATGGTTGTTCTTATGAGAAACTAGAAGTTTCATGGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACGTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGCATATCAATTA--AAGTACTTATTTATGTTTC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAAAGCAAAGAATGTTTTTTGATGTCGGTCTTGTTGATATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Acrocomia_intumescens_PL78"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTA-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACGTCAATCATGTAAATGCT-
ATCTGGTATGCTGTTGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGCATATCAATTATCAAGTACTTATTTATGTTTC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGGACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAAAGCAAAGAATGTTTTTTGATGTCGGTCTTGTTGATATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Aiphanes_horrida_PL112"/>
--------------TTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
CTCTTTTA-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGGATTTTTGG-
AGAAATTTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATTATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTT-GAAGTTATATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTGATGTTCC---ACTC--
TTGACAAGAGAGGTGGGTATATCAAAATTTGATCTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGGGTGCAGGATGTTTTTTGATGTCGGTCTTGTTGGTATCAAATGCTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGGGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Aiphanes_minima_PL111"/>
------------------------ACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
CTCTTTTA-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGSATTTTTGG-
AGAAATTTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATTATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTT-GAAGTTAWATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTGATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGGGTGCAGGATGTTTTTTGATGTCGGTCTTGTTGGTATCAAATGCTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGGGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Aiphanes_ulei_PL107"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCTTTTG-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAATTTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATTATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTACAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGCTGGGTGGGTATATCAATTATCAAGTACTTATTGATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAGGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGGGCAAAAGATGATTTTTGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAA----
GCTTGTCATTTTTCAAGGATCTATTAAATTTCTTGTCCTGTTGTTGATGGGCATCTTTAATGCTTCTCAGGGATGTGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL102"/>
--------------TTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCACTTG-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGGGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATARTCTTGAGCTTGCATAATGCATCTTCACACGATAGGGAACATGAC--
TTACGCAGTAAGCATTTGCTATAGATTMGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCACGTAAATGCT-
ATCTGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTRATTTGTTTTTAGATACATGAAWCTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACWGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGCCGTTCTTGTTGGTATCAAATACTAAATCTGAAGCTTGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL95"/>
--------------TTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCACTTG-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGGGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATARTCTTGAGCTTGCATAATGCATCTTCACACGATAGGGAACATGAC--
TTACGCAGTAAGCATTTGCTATAGATTMGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCACGTAAATGCT-
ATCTGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTRATTTGTTTTTAGATACATGAAWCTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACWGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGCCGTTCTTGTTGGTATCAAATACTAAATCTGAAGCTTGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
RTAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL104"/>
------------------------ACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-CTTCTGCAAG--CATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGGGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACGATAGGGAACATGAC--
TTATGCAATAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTGCTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGCGCAAAGAATGTTTTTTGATGCCGTTCTTGTTGGTATCAAATACTAAATCTGAAGCTTGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL85"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGGGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACGATAGGGAACATGAC--
TTATGCAATAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTGTATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGCCGTTCTTGTTGGTATCAAATACTAAATCTGAAGCTTGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL86"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGGGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACGATAGGGAACATGAC--
TTATGCAATAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTGTATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGCCGTTCTTGTTGGTATCAAATACTAAATCTGAAGCTTGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL108"/>
TTTTAGATGTTC-TTTTTACCTCAACACTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGATAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AAAAAAATTGAACGAGGAACTTGGAGATGGGTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGGCTAAAATA-TTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAACCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCTAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTKACAAGAGAGGTGGGTATATCAAAATTTGATGT-
GTGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTATATCAGTCAGAGCAAAGAATGTTTTTTGATGTTGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCTGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL94"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCACTTG-------TAGACAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGGGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATARTCTTGAGCTTGCATAATGCATCTTCACACGATAGGGAACATGAC--
TTACGCAGTAAGCATTTGCTATAGATTMGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCACGTAAATGCT-
ATCTGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTRATTTGTTTTTAGATACATGAAWCTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACWGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGCCGTTCTTGTTGGTATCAAATACTAAATCTGAAGCTTGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL96"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGATAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AAAAAAATTGAACGGGGAACTTGGAAATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTATATGTGCCATTTGTCT--CCTTCTAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAGTTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGTCAGTCTTGTTGGTATCAAATACTAAATCTTAAGCTGGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL97"/>
TTTTAGATGTTC-TTTTTACCTCAACACTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGATAAA-CTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AAAAAAATTGAACTAGGAACTTGGAGATGGGTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGGCTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCTAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATATGATGT-
GTGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTATATCAGTCAGAGCAAAGAATGTTTTTTGATGTTGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCTGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL101"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGATAAA-CTTCTGCAAG--TATATACCAG-
TTCATTGCATTTTTGGAAAAAAAATTGAACGGGGAACTTGGAAATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACTTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTATATGTGCCATTTGTCT--CCTTCTAAGTTATATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAGTTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGTCAGTCTTGTTGGTATCAAATACTAAATCTTAAGCTGGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL117"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGATAAA-CTTCTGCAAG--TATATACCAG-
TTCATTGCATTTTTGGAAAAAAAATTGAACGGGGAACTTGGAAATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACTTCAATCATGTAAATGCT-
ATCTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTATATGTGCCATTTGTCT--CCTTCTAAGTTATATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAGTTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGTCAGTCTTGTTGGTATCAAATACTAAATCTTAAGCTGGCTTGTCATTTTTCGAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Attalea_crassispatha_PL21"/>
----------------------------TTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAAACTTCTGCAAG--CATATGCCAGGTCCATTGCATTTTTGG-
AGAAAATTTGAACAAGAAACTTGGAGATGGTTGTTCTTATGAGAAACTAGAAGTTTCA--GTCT-
GAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--TT-
TGCAGTAAGCATTAGCTATAGATTAGGATATTAGTCTAGTGCTAGCTGGTACTTTTATCCAAATCTGACTGA--
TATTTTAGACCTCAACCATGTAAATGGT-
ATCTGGTATGCTGTCGGGCCAGATACAGAATCCAGAACTGATTTAGAAGCTAATGTGATTCGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCAAAGTCAAATTTGCAGGCTATGTAACAT-
AAAAGATGGGTGGGCATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGATGAGAGAGGTGGGTATATCAAATTTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCGGTCAGAGCAAAGAATGTTTTTTGATGTCAGTCTTGTTGGTATCAAATACTAAAGCTTAAGCTTGCTTGTCATTTTTCAAAGATCGATTAAATTTCTTATACTGTTGTTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
AT-ATTTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_brongniartii_PL83"/>
--TTAGATGTTC-TTTTTACCTCAATATTTGTTTGCTTAATTGCCTGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGATAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCAATTTTGG-
AGAAAATTTGAACGAGAAAATGGGAGATGGCTGTTCTTATGAGAAACTAGAAGTCTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAACAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTCATTTATGTTCCACTACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCGAAGAATGTTTTTCGATGTCGGTCTTGTTGGTGTCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGATCTTCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_cf_maraja_PL113"/>
------------------ACCTCAATATTTGTTTGCTTAATTGCCTGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACYAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGAATCCAGAAYTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTRTGTTCCACTACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTCGATGTYGGTCTTGTTGGTATCAARTACTAAATCTTAARCTTGCTTGTCATTTTTCAAAGATCTRTTAAATTTCTTATCCTGTYATTGATGATCATCCTTAATGCTTCTCAGGGATATGTGATATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_coloniata_PL98"/>
TTTTAGATGTTC-TTTTTACCTCAATATTTGTTTGCTTAATTGCCCGAGTTCTATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAATTTTGAACGAGAAAATTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
TAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTGTGTTCCACTACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGTTGGTCTTGTTGGTATCAAGTACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGATCATCCTTAATGCTTCTCAGGGATATGTGATATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_concinna_PL106"/>
TTTTAGATGTTC-TTTTTACCTCAATATTTGTTTGCTTAATTGCCCGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCCCACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTGTGTTCCACTACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGTTGGTCTTGTTGGTATCAAGTACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGATCATCCTTAATGCTTCTCAGGGATATGTGATATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL92"/>
--------------TTTTACCTCAATATTTGTTTGCTTAATTGCCTGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTACGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTACGCAGTAAGCATTTGCTATAGATTAGGATGTTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGCAAATGCA-
ATCTGGTATGTTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGCCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTATGTTCC---ACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGCATTGTATCAGTCAGAGCAAAGAATGTTTTTCGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGGTGATCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL93"/>
---------TTC-TTTTTACCTCAATATTTGTTTGCTTAATTGCCTGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTACGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTACGCATTAAGCATTTGCTATAGATTAGGATGTTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGCAAATGCA-
ATCTGGTATGTTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGCCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTATGTTCC---ACTCTTTTGAC--
GAGAGGTGGGTATMTCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGCATTGTATCAGTCAGAGCAAAGAATGTTTTTCGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGGTGATCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_major_PL114"/>
TTTTAGATGTTC-TTTTTACCTCAATATTTGTTTGCTTAATTGCCTGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGAMTCCAGAATTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTATGTTCCACTACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGAATTGTATCARTCAGAGCAAAGAATGTTTTTCRATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAACTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTCATTGATGATCATCCKTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_mexicana_PL88"/>
-TTTAGATGTTC--TTTTACCTCAATATTTGTTTGCTTAATTGCCTGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTACGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATGTTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGCAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCACTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTATGTTCC---ACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTCGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGGTGATCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_militaris_PL109"/>
TTC-TTTTTAC---------CTCAATATTTGTTTGCTTAATTGCCTGAGTTATCTTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTACGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATGTTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGCAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCACTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTATGTTCC---ACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAKATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTCGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGGTGATCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Bactris_plumeriana_PL99"/>
TTTTAGATGTTC-TTTTTACCTCAATATTTGTTTGCTTAATTGCCTGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTCCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGAATTCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTATAGGTATTGTTAAATGTGCCATTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTATGTTCC---ACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTCGATGTCGGTCTTCTTGGTATCAAATACTAAATCTTAA----
GCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGATCATCCTTAATGCTTCTCAGGGATATGTG---------
ATAATG-
</sequence>
<sequence>
<taxon idref="Bactris_sp_PL80"/>
-TTTAGATGTTC-TTTTTACCTCAATATTTGTTTGCTTAATTGCCTGAGTTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-TTTCTGCAAG--TATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGAAAATTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATGATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCTGGTATGTTGTCAGGCCAGATATGGACTCCAGAATTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CTTTTGAAGTTAAATTTGCATGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATGAAGTACTTATTTATGTTCCACTACTCTTTTGAC--
GAGAGGTGGGTATATCAAAATTTGATGTAATGATCAAAAAAGAAAGCAGATCATTTGTTAAAACATATGGAATTGTATCAATCAGAGCAAAGAATGTTTTTCGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAACTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTCATTGATGATCATCCGTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Barcella_odora_PL121"/>
------------------------ACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAGA-CTTCTGCAAG--TGTATACCAGTTCCATTGCATTGTTGG-
AGAAAATTCGAACGAGAGACTTGGAGATGGCTGTTCTTATGATAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGTAAGCAGCTGCTATAGATTAGGATATTAGTCTAGTGCTAGCTGGTA-
TTTTATCCAAATCCGACTGAAATATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTAAAATGTGCCATTTGTCT--CCTTCGAAGTCAAATTTGCAGGCTACATGACAT-
AAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCCATCAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGGAGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATA-TTTATAATGC
</sequence>
<sequence>
<taxon idref="Beccariophoenix_madagascariensis_PL47"/>
-----------------------AACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-CTTCTGCAAG--TATATACC-GGTCCATTGCATTTTTGG-
AGAAAATT-
GAACAAGAAACTTGGAGATGGTTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAACTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TT-TGCAGTAAGCATTAGCTATAGATTAGGATATTAGTCTAGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTGAAATATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGCTGTCRGGCCAGATACAGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTCAAATTTGCAGGCTATGTAACAT-
AAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACGAGAGAGGTGGGTATATCAAATTTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATATGTCAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCGATTAAATTTCTTATGCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
AT-ATTTATAATGC
</sequence>
<sequence>
<taxon idref="Cocos_nucifera"/>
-TTTG-ATGT-C-TTTTTACCTAA-CATT-GTTT-CTTAAT-CCCTGAAT-
ATATTTTTATTTAGGTTCATTTG-------TAGACAAAACTTCTGCAAG--
TATGTACCAGGTCCATTGCATTTTTGG-
AGAAAATTTGAACAAGAAACTTGGAGATGGTTGTTCTTATGAGAAACTAGAAGTTTCATAGTCT-
GAGCTTGCATAATGATTCTTCACACAGTAGAGAACATGAC--TT-
TGCAGTAAGCATTAGCTATAGATTAGGATATTAGTCTAGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTGAAACATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGCTGCCGGGCCAGATACAGAATCCAGAACTGATTTGGAAGCTTATGTGATTTATTTTTAGATACATGAAACTTAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCAAAGTCAAATTTGCAGGCTATGTAACAT-
AAAAGATGGGTGGGCATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGATGAGAGAGGTGGGTATATCAAATTTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATTGGTCAGAGCAAAGAATGTTTTTTGATGTTGGTCTTGTTGGTATCAAATACTAAAGCTTAAGCTTGCTTGTCATTTTTCAAAGATCAATTAAATTTCTTATCCTGTTGTTGATGAGCATCCTTAATGTTTCTCAGGGATATGTG--
A-------------
</sequence>
<sequence>
<taxon idref="Desmoncus_orthacanthos_PL100"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-CTTCTGCAAGTATATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAGTAGAGAACATGAC--
TTATGCAGTAAACATTTGCTATAGATTAGGACATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTTAATCATGTAAATGCT-
ATCCGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGTTTTAGAAGCTTATGTGATTTGTTTTTAGATACGTGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGATAT-
GAAAGATGTGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATGAACAAAAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_PL90"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-CTTCTGCAAGTATATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAGTAGAGAACATGAC--
TTATGCAGTAAACATTTGCTATAGATTAGGACATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCCGGTATGCAGTCAGGCCAGATATGGAATCCAGAACTGTTTTAGAAGCTTATGTGATTTGTTTTTAGATACGTGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---ACTCTTTTGACA--
AGAGGTGGGTATATCAAAATTTTATGTAATGAACAAAAAAGAAACCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGTTGGCATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATGTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_var_prunifer_PL115"/>
TTTTAGATGTTC-TTTTTACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAA-CTTCTGCAAGTATATATACCAG-TTCATTGCATTTTTGG-
AGAAAATTTGAACGAGGAACTTGGAGATGGCTGTTCTTATGAGAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATTTTCACACAGTAGAGAACATGAC--
TTATGCAGTAAACATTTGCTATAGATTAGGACATTAGTCTTGTGCTAGCTGGTA-
TTTTATCCAAATCTGACTAAAATATTTTAGACCTCAATCATGTAAATGCT-
ATCCGGTATGCAGTCAGGCCAGATATGGAATCCAGAACTGTTTTAGAAGCTTATGTGATTTGTTTTTAGATACGTGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTTAAATTTGCAGGCTATGTGACAT-
GAAAGATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---ACTCTTTTGACA--
AGAGGTGGGTATATCAAAATTTTATGTAATGAACAAAAAAGAAACCAAATCATTTGTTAAAACATATGGAATTGTATCAGTCAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGTTGGCATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATGTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATAATGTATAATGC
</sequence>
<sequence>
<taxon idref="Elaeis_guineensis_PL124"/>
----------------------------TTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTGTAGACACTAGACAGA-CTTCTGCAAG--TGTATACCAGTTCCATTGCATTGTTGG-
AGAAAATTTGAACGAGAGACTTGGAGATGGCTGTTCTTATGATAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--
TTATGCAGCAAGCAGCTGCTATAGATTAGGATATTAGTCTAGTGCTAGCTGGTA-
TTTTATCCAAATCCGACTGAAATATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGCTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTAAAATGCGCCATTTGTCTCCCCTTCGAAGTCAAATTTGCAGGCTACGTGACAT-
AAAATATGGGTGCGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCCATCAGAGGAAAGAATGTTTTTTGATGTCGGTCTTGTAGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTAT---------------------------------------------------
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL110"/>
------------------ACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTGTAGACACTAGACAGA-CTTCTGCAAG--TGTATACCAGTTCCATTGCATTGTTGG-
AGAAAATTTGAACGAGAGACTTGGAGATGGCTGTTCTTATGATAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATACAGAACATGAC--
TTATGCAGCAAGCAGCTGCTATAGATTAGGATATTAGTCTAGTGCTAGCTGGTA-
TTTTATCCAAATCCGCCTGAAATATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGGTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTAAAATGTGCCATTTGTCTCCCCTTCGAAGTCAAATTTGCAGGCTACGTGACAT-
AAAATATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCCATCAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGTAGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATA-TTTATAATGC
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL87"/>
-TTTAGATGTTC-TTTTAACCTCAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTGTAGACACTAGACAGA-CTTCTGCAAG--TGTATACCAGTTCCATTGCATTGTTGG-
AGAAAATTTGAACGAGAGACTTGGAGATGGCTGTTCTTATGATAAACTAGAAGTTTCATAGTCTTGAGCTTGCATAATGCATCTTCACACAATACAGAACATGAC--
TTATGCAGCAAGCAGCTGCTATAGATTAGGATATTAGTCTAGTGCTAGCTGGTA-
TTTTATCCAAATCCGCCTGAAATATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGGTGTCAGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTAAAATGTGCCATTTGTCTCCCCTTCGAAGTCAAATTTGCAGGCTACGTGACAT-
AAAATATGGGTGGGTATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGACAAGAGAGGTGGGTATATCAAAATTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCCATCAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGTAGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATA-TTTATAATGC
</sequence>
<sequence>
<taxon idref="Jubaea_chilensis_PL62"/>
---------------------------TTTGTTTTCTTAATTGCCTGAATTATATGTTTATTTAG-
TTCATTTG-------TAGACAAAACTTCTGCAAG--TATATACCAGGTCCATTGCATTTTTGG-
AGAAAATTTGAATAAGAAACTTGGAGATGGTTGTTCTTATGAGAAACTAGCAGTTTCATAGTCT-
GAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--TT-
TGCAGTAAGCATTAGCTATAGATTAGGATATTAGTCTAGTGCTAGCTAGTA-
TTTTATCCAAATCTGACTGAAATATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGCTGTCGGGCCAGATACAGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATT-GTCT--CCTTCAAAGTCAAATTTGCAGGCTATGTAACAT-
AAAAGGTGGGTGGGCATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGATGAGAGAGGTGGGTATATCAAAGTTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCGGTCAGAGCAAAGAATGTTTTTTGATGCCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATCGATTAAATTTCTTATGCTGTTATTGATGAGCATCCTTAATGCTTCTCAGG-
ATATGTG--AT-ATTTATAA---
</sequence>
<sequence>
<taxon idref="Parajubaea_torallyi_PL64"/>
--------------TTTTACCTAA-CATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TAGACAAAACTTCTGCAAG--TATATACCAGGTCCATTGCGTTTTTGG-
AGAAAATTTGAACAAGAAACTTGGAGATGGTTGTTCTTATGAGAAGCTAGAAGTTTCATAGTCT-
GAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--TT-
TGCAGTAAGCATTGGCTATAGATTAGGATATTAGTCTAGTGCTAGCTAGTA-
TTTTATCCAAGTCTGACTGAAATATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGCTGTCGGGCCGGACACAGAGTCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCAAAGTCAAATTTGCAGGCTATGTAACAT-
AAAAGATGGGTGAGCATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGATGAGAGAGGTGGGTATATCAAATTTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATTGGTCAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATTTTTCAAAGATTGGTTACATTTCTTATACTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
AT-ATTTATAATGC
</sequence>
<sequence>
<taxon idref="Reinhardtia_gracilis_var_rostrata_PL119"/>
TTTTAAATGTTCATTTTTACCTAAACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------TGGACAAA-CTTCTGCAAG--TATATACCAGGTCCACTGCATTTTTGG-
AGAAAATTTGAACGAGAAACTTGGAGATGGTTGTTCTTATGAGAAACTAGAAGTTTCGTAGTCTTGAGCTTGCATAATGCATCTTCACACGATGCAGAACATGAC--
TTATGCAGTAAGCATTAGCTATAGATTAGGATAGTAGTCCAGTGCTAG------------------------------------------------------------
CTGGTATGCTGTCGGGCCAGATATGGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTATAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCGAAGTCAAATTTGCAGGCTATGTAACAT-
AAAAGATGAGTGGGTATTTCAATTGTCAAGTACTTATTTATGTTCC---
ACTCGTTTGACAAGAGAGGTGGGTATATCAAATTTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATCGAATTGTATCAGTTAGAGCAAAGAATGTTTTTTGATGTCGGTCTTGTTGGTATCAAATACTAAATCTTAAGCTTGCTTGTCATATTTCAAAGATCTATTAAATTTCTTATCATGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
ATA-TTTATAATGC
</sequence>
<sequence>
<taxon idref="Reinhardtia_latisecta_PL120"/>
-----------CTTTTTTACCTAAACATTTGTGTTCTTAATTACCTGAATTATATTTTTATTGAG-
TTTGTTTG-------TAGACAAA-CTTCTGCAAG--TATATACCAGGTCCATTGCATTTTTGG-
AGAAAATTTAAACAGGAAACTCGGGGATGGTTGTTCATATGAGAAACTAGAAGTTTCATAGTCTCGAGCTTGCATAATGCATCTTCACACAATAGAGAACGTGAC--
TTATGCAGTAAGCATTTGCTATAGATTAGGATATTAGTTTTGTGCTAACGGGTA-
TCTTATCCAAATCTGACTGGAATATTTTAGACTTCAATCATATAAATGGTAATCTGATATGCTGTTGGGCCAGATACGGAATCCAAAACTGATTCAGAAGGTTATGCGATTTGATTTTAGATGCATGAAACTAAATTTGGTATTGACAAGCAAGGTTTTAAATCCTGTGGGATGGAAATGTCCCGATTTTTTCATGGAACAGGACGTGTCGCCATCCCATCCCATCTTGATACTTGGGACGGGATGTTCCAAGATATTCTGATCGAGATGCTGGGATATTTAAAACCGGGGATGTCCAAGATATCCTGATCGGGACGTTGATATACTTGCAGGATGTCTTGTCCTGACATATGGGATGGTATCCCATCCTGGTATCCCGCAGGACGTCCTGCGGACGTAAATCCTTACTTACAGGTATTGTTAAATGTGCCATTTGTCT--
TCTTTAAAGACAAATTTGCAGGTTATGTAACAT-AAAAAATGGGTGGGTA-------
TATCAAGTACTTATTAATGTTCC---
ACTCTTTTGACRAAGAGGTGGGGTCTATCAAATTTTGATGTAATAAACAAGAAGGCAAGCAAATCRTTTGTTAAAACATAWGAAATTGTATCAGTCAGAGCCAGGAATGTCTTTTGATGTYGGTCTTGTTGGTATCCAATATTAAATCTTAAGTTTGCTTGTCAATTTTCAAAGATCTATTAAATTTCTTATCCTGTTATTGATGAGCATCCTTGATACTTCTTAGGGATATG------------------
</sequence>
<sequence>
<taxon idref="Roystonea_borinquena_PL122"/>
TTTTAGATGTTCTGTTTTACCTAAACATTTGTTTTCTTAATTACCTGAATTATATTTTCATTGAG-
TTCGTTTG-------TAGGCAAA-TTTCTGCAGG--TATATACAAGGTCCATTGCATTTTTGG-
AGAAAATTTAAACTGGAAACCTGGAGATG---
GTTCTCATGAGAACCTAGTAGTTTCATAGTCTTGAGCTTGCATAATGCATTTTCACACAATAGAGAACATTAC--
TTATGCAGTAAGCATTCGTTATAGATTAGGATGTTATTTTAGTGCTAGGTGGTA-
TCTTATCCGGATCTGACTGGAATATTTTTGACCTCAATCATGTAAATGGT-
ATCTGATATGCTGTCAGGCCAGATACTGAATCCAGAACTTATTCATAAGCTTATGTAATTTGTTTTCAGGTGCATGAAACTACATTTGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGAGGTATTGTTAAACGTGCGATTTGTCT--
CCTTCAGAGACAAATTTGCAGGCCATGTAACATAAAAAGATGGGTGGGTA-------
TATGAAGTACTTATTAATGTTCC---ACTCTTTTGACAA-
AGAGGTGGATCTATCAAATTTTGATGTTATAAACAAGAAAGCAAGCAAATCATTTGTTAAAGCATATGGAATTGTATCAGTCAGAGATAAGAATCTTTTCTGATGTTGGTCTTGTTGGTATCAAGTACTAAAGCTGAAGCTTGCTTGTCATTTTTCAAAGACCTATTAGATTTCTTATCCTGTTGTTGATGAGCATCCTTGATGCTTCTCAGATATATGTG--
ATA-TTTCTAATGC
</sequence>
<sequence>
<taxon idref="Roystonea_oleracea_PL123"/>
------------------------ACATTTGTTTTCTTAATTACCTGAATTATATTTTTATTGAG-
TTCGTTTG-------TAGGCAAA-TTTCTGCAGG--TATATACAAGGTCCATTGCATTTTTGG-
AGAAAATTTAAACTGGAAACCTGGAGATGGTTGTTCTCATGAGAACCTAGTAGTTTCATAGTCTTGAGCTTGCATAATGCATTTTCACACAATAGAGAACATTAC--
TTATGCAGTAAGCATTCGCTATAGATTAGGATGTTTTTTTAGTGCTAGGTGGTA-
TCTTATCCAGATCTGACTGGAATATTTTAGACCTCAGTCATGTAAATGGT-
CTCTGATATGCTGTCAGGCCAGATACTGAATCCAGAACTTATTCATAAGCTTATGTAATTTGTTTTCAGGTGCATGAAACTACATTTGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAGAGGTATTGTTAAACGTGCGATTTGTCT--
CCTTCAGAGACAAATTTGCAGGCCATGTAACATAAAAAGATGGGTGGGTA-------
TATGAAGTACTTATTAATGTTCC---ACTCTTTTGACAA-
AGAGGTGGATCTATCAAATTTTGATGTTATAAACAAGAAAGCAAGCAAATCATTTGTTAAAGCATATGGAATTGTATCAGTCAGAGATAAGAATCTTTTCTGATGTTGGTCTTGTTGGTATCAAATACTAAAGCTGAAGCTTGCTTGTCATTTTTCAAAGACCTATTAGATTTCTTATCCTGTTGTTGATGAGCATCCTTGATGCTTCTCAGATATATGTG--
ATA-TTTCTAATGC
</sequence>
<sequence>
<taxon idref="Syagrus_romanzoffiana_PL27"/>
-----------------------AACATTTGTTTTCTTAATTGCCTGAATTATATTTTTATTTAG-
TTCATTTG-------AAGACAAAACTTCTGCARG--TATATACCAGGTCCATTGCATTTTTGG-
AGAAAATTTGAGCAAGAAACTTGGAGATGGTTGTTCTTATGAGAAACTAGAAGTTTCATAGTCT-
GAGCTTGCATAATGCATCTTCACACAATAGAGAACATGAC--TT-
TGCAGTAAGCATTAGCTATAGATTAGGATATTACTCTAGTGCTAGCTAGTA-
TTTTATCCAAATCTGACTGAAATATTTTAGACCTCAATCATGTAAATGGT-
ATCTGGTATGCTGTCGGGCCAGATACAGAATCCAGAACTGATTTAGAAGCTTATGTGATTTGTTTTTAGATACATGAAACTAAATTTGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACAGGTATTGTTAAATGTGCCATTTGTCT--CCTTCAAAGACAAATTTGCGGCCTATGTAACAT-
AGAAGATGGGTGGGCATATCAATTATCAAGTACTTATTTATGTTCC---
ACTCTTTTGATGAGAGAGGTGGGTATATCAAATTTTGATGTAATAAACAAGAAAGAAAGCAAATCATTTGTTAAAACATATGGAATTGTATCGGTCAGAGCAAAGAATATTTTTTGATGTTGGTCTTGTTGGTATCAAATACTAAATCGTAAGCTTGCTTGTCATTTTTCAAAGRTCAATTAAATTTCTTATACTGTTATTGATGAGCATCCTTAATGCTTCTCAGGGATATGTG--
AT-ATTTATARTGC
</sequence>
</alignment>

<!-- The sequence alignment (each sequence refers to a taxon
above). -->
<!-- ntax=47
nchar=817 -->
<alignment id="alignment6" dataType="nucleotide">
<sequence>
<taxon idref="Acrocomia_aculeata_PL75"/>
----------------------------------------------------------------------------------------------------------------------------------------------
AGGAGCAACCCTGGAGGTGTCGACTTCAAT---GAAGATGAACCCGATGCAAAGCGTTGGTAA---
GCTTCTCCAT-GAGAATTACTCA-GAT--T--GTAAAATG-ACTC-GAAGTCTT---A--
TAAATTTGAATGGAAATTAATCC---GTCCTTCTTATTCTTT-CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCGAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAAGGCAATCCAAATCCAAGGTGAGCAAATA----
TTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GGCTACGTAGAATCAAAACTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAAAAAAAAA----
TCTTTACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAA----------
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL76"/>
-----------GTTCTCTCCATTCTGAAGCATCCGGTCATTCGTTCGGTGGGCAATCTGGCA---
CCCCGATGGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAAAGGAGCAACCCTGGAGGTGTCGACTTCAAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCA-GAT--T--
GTAAAATG-ACTC-GAAGTCTT---A--TAAATTTGAATGGAAATTAATCC---GTCCTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCGAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAAGGCAATCCAAATCCAAGGTGAGCAAATA----
TTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GGCTACGTAGAATCAAAACTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAAAAAAAA-----
TCTTTACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Acrocomia_aculeata_PL77"/>
----------GGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGCA---
CCCCGATGGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAAAGGAGCAACCCTGGAGGTGTCGACTTCAAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCA-GAT--T--
GTAAAATG-ACTC-GAAGTCTT---A--TAAATTTGAATGGAAATTAATCC---GTCCTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCGAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAAGGCAATCCAAATCCAAGGTGAGCAAATA----
TTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GGCTACGTAGAATCAAAACTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAAAAAAAAA----
TCTTTACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Acrocomia_crispa_PL116"/>
-GCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGCA---
CCCCGATGGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAAAGGAGCAATCCTGGAGGTGTTGACTTCAAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAACTACTCT-GGT--T--
GTAAAATG-AGTC-GAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCCTTGTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTAAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GGCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAGAAAAAAAA--------
TCTTTACC-TGGTCTGTTTTCTTATCGTTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Acrocomia_intumescens_PL78"/>
-----------GTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGCA---
CCCCGATGGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAAAGGAGCAACCCCGGAGGTGTTGACTTCAAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCA-GAT--T--
GTAAAATG-ACTC-GAAGTCTT---A--TAAATTTGAATGGAAATTAATCC---GTCCTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
TTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GGCTACGTAGAATCAAAACTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----
AGAAAAAAAAAAAAAAAAAAATCTTTACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Aiphanes_horrida_PL112"/>
---------GGGTTCTCTCCATTCTGAAGCATCCGATCATTCCTTCGGTGGGCAATCTGGCA---
CCCCGATCGACTCTGTTGCGACGCCCGACAATTCCTCAGTTTCCTTTGGCGATGATGATGTTGATATGAGCTCGAAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGATGAACCCGATACAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATG-ACTC-GAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCCTCCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATCTCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATACTCT-GGCTATGTAGAATCAAACATTCAAATTCATATGAAG-TTTTAGCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATGAGAA-TTTTTTTTTT--AGGAAAAAAAAAAAAA-----
TCTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Aiphanes_minima_PL111"/>
---------GGGTTCTCTCCATTCTGAAGCATCCGATCATTCCTTTGGTGGGCAATCTGGCA---
CCCCGATCGACTCTGTTGCGACGCCCGACAATTCCTCAGTTTCCTTTGGCGATGATGATGTTGATATGAGCTCGAAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGATGAACCCGATACAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATG-ACTC-GAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCCTCCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATCTCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATACTCT-GGCTATGTAGAATCAAACATTCAAATTCATATGAAG-TTTTAGCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATGAGAAATTTTTTTTTTT-AGGAAAAAAAAAA--------
TCTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAA----------
</sequence>
<sequence>
<taxon idref="Aiphanes_ulei_PL107"/>
GGCAGTTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCCTTCGGTGGGCAATCTGGCA---
CCCCGATCGACTCTGTTGCGACGCCCGACAATTCCTCAGTTTCCTTTGGCGATGATGATGTTGATATGAGCTCGAAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCTTGAT--T--
GTAAAATG-ACTC-GAAGTCTT---G--TAAATTTGAACGGAAATTAATCA---GTCCTCCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGCCCACTGTGCAAGAAACTAAGCAAC----
CAATACTCT-GTCTATGTAGAATCAAACATTCAAATTCATATGAAG-TTTTAGCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATGAGAA-TTTTTTTTTTT-GGAAAAAAAAAAAA-------
TCTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL102"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGCA---
CCCCGATCGACTCCGTTGCGACTCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTCAAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATT-ACTC-GAGGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCCT---TATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGGCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATACTCT-GGCTAA------------CTTCAAATTCACATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCGTAAGAA-TATTTATT----AGAAAAAAAG-----------
TCTTGACCTTGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Astrocaryum_alatum_PL95"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGCA---
CCCCGATCGACTCCGTTGCGACTCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTCAAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATT-ACTC-GAGGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCCT---TATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGGCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATACTCT-GGCTAA------------CTTCAAATTCACATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCGTAAGAA-TATTTATT----AGAAAAAAAG-----------
TCTTGACCTTGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL104"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGCA---
CCCCGATCGACTCCGTTGCGACGCCTGAAAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTCAAT---
GAAGATGAACCCAATGCAAAGCGTTGGTA---AGCTTCTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATT-ACTC-GAGGTCTT---G--TAAATTTGAATGGAAATTAATCG---GTCCT---TATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCACGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATACTCT-GGCTACGTTGAATCAAAACTTCAAATTCACATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAG-----------
TCTCGACCTTGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAA-----------
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL85"/>
------------------------------------------------------------------------------------------------------------------------------------------------
GAGCAATCCTGGAGGTGTTGACTTCAAT---GAAGATGAACCCAATGCAAAGCGTTGGTAA---
GCTTCTCCAT-GAGAATTACTCY-GAT--T--GTAAAATT-ACTC-GAGGTCTT---G--
TAAATTTGAATGGAAATTAATCA---GTCCT---TATTCTTT-CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCACGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATACTYT-GGCTACGTTGAATCAAAACTTCAAATTCACATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAG-----------
TCTTGACCTTGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAA-----------
</sequence>
<sequence>
<taxon idref="Astrocaryum_mexicanum_PL86"/>

GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGCACCCCCCCGATCGACTCCGTTGCGACGCCTGAAAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTCAAT---
GAAGATGAACCCAATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATT-ACTC-GAGGTCTT---G--TAAATTTGAATGGAAATTAATCC---GTCCA---TATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGGTATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGGTAGGCCTTCAAACACGTTGCGCACGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATACTCT-GGCTACGTTGAATCAAAACTTCAAATTCACATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAG-----------
TCTTGACCTTGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL108"/>
-----------GTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAGTCTGGTA---
CCCCGATCGACTCCGTTGCRACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGATCRTGAAGATGAACCCGCTGCAAAGCGTTGGTAATTAGCTTCTCCAT-
GAGAATTACWMT-GAT--T--GTAAAATG-ACTCAAAAGTCTT---G--
TAAATTTGAATGGAAATTAATCA---GTCCT---TMTTMTTY-
YYWSSARGAARRAAGRMGRSRAKAATGAAGGGACATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTCGTGGCSACTGTGCAAGMAACTAAGCAGG----
CAATGCGCT-GGCTACGYAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAAA-----------
CTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTTTGATCAATAGGAGCTACTACAAATGCACAAC--
</sequence>
<sequence>
<taxon idref="Astrocaryum_murumuru_PL94"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAGTCTGGTA---
CCCCGATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGATCATGAAGATGAACCCGCTGCAAAGCGTTGGTAATTAGCTTCTCCAT-
GAGAATTACTCT-GAT--T--GTAAAATG-ACTCAAAAGTCTT---G--
TAAATTTGAATGGAAATTAATCA---GTCCT---TATTCTTT-CCAGGAAGAAAGAAGGCGAG---
AACGAAGGGACATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTCGTGGCCACTGTGCAAGAAACTAAGCAGG----
CAATGCGCT-GGCTACGCAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAAAA----------
CTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL96"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTTGGTGGGCAATCTGGTA---
CCCCGATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTCAAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GTT--T--
GTCAAATG-ACTC-GAGGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCCT---TATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATACGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAGG----
CAATGCGCT-GGCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAA------------
TCTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Astrocaryum_sp_PL97"/>
-----------GTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAGTCTGGTA---
CCCCGATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGMAATCCTGGAGGTGTTGACTTTGATCATGAAGATGAACCCGCTGCAAAGCGTTGGTAATTAGCTTCTCCAT-
GAGAATTACTCT-GAT--T--GTAAAATG-ACTCAAAAGTCTT---G--
TAAATTTGAATGGAAATTAATCA---GTCCT---TATTCTTT-CCAGGAAGAAAGAAGGCGAG---
AATGAAGGGACATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGRAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTCGTGGCCACTGTGCAAGMAACTAAGCAGG----
CAATGCGCT-GGCTACGYAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAAA-----------
CTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAAC--
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL101"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGTA---
CCCCGATCGACTCCATTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGATCATGAAGATGAACCCGATGCAAAGCGTTGGTAATTAGCTTCTCCAT-
GAGAATTACTCT-GAT--T--GTAAAATG-ACTCAAAAGTCTT---G--
TAAATTTGAATGGAAATTAATCA---GTCCT---TATTCTTT-CCAGGAAGAAAGAAGGCGAG---
AATGAAGGGACATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTCGTGGCCACTGTGCAAGAAACTAAGCAGG----
CAATGCGCT-GGCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAA-----------
TCTTTACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCATTAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Astrocaryum_standleyanum_PL117"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCAATCTGGTA---
CCCCGATCGACTCCATTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGATCATGAAGATGAACCCGATGCAAAGCGTTGGTAATTAGCTTCTCCAT-
GAGAATTACTCT-GAT--T--GTAAAATG-ACTCAAAAGTCTT---G--
TAAATTTGAATGGAAATTAATCA---GTCCT---TATTCTTT-CCAGGAAGAAAGAAGGCGAG---
AATGAAGGGACATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----TTGCTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTCGTGGCCACTGTGCAAGAAACTAAGCAGGCCAGCAATGCGCT-
GGCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-GCTGGTTCT--
GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAAAA-----------CTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Attalea_crassispatha_PL21"/>
----------GGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCGATCTGGCA---
CCCCGATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGTCGATATGAGCTCGCAGAGGAGCAATCCTGGACGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
ATAAAATA-ACT-TGAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCGTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATTGATATCCTCGACGATGGGTATCGCTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----
CTATTAACATGTGAAATGTTTGACATATTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAG----
CAATACTCT-GGCTACGTAGAATCAAAACTTCACATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTACT----AAATCAAA-------------
CGTTGTCC-AGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAA---
</sequence>
<sequence>
<taxon idref="Bactris_brongniartii_PL83"/>
----------------------------------------------------------------------------------------------------------------------------------------------
AGGAGCAATCCTGGAGGTGTTGACATTGAT---GAAGATGAACCCGATGCAAAGCGTTGGTAA---
GCTTCTCCAT-GAGAAATACTCT-GAT--T--GTAAAATT-ACTCAAAAGACCT---G--
TAAATTTGAATGGAAATTAATCA---GTCCTTCATATTATTT-CCAGGAAGAAAGAAGGTGAG---
AATGAGGGGATATCAGCTTCAGGAAATAAAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTAAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAA----
CAATGCTCT-GGCTGCGTGGAATCAAACCTTCAAATTCATATGCAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATATATCTATTAGGAAAAAAAAAAAAAA----
TCTTGACC-
TGGTCTGTTTTCTTATCATTTACATGCCTCTGTGTTATGATCAATAGGAGCTACTACA------------
</sequence>
<sequence>
<taxon idref="Bactris_cf_maraja_PL113"/>
-----------GTTCTCTCCATTCTGAAGCATCCGATCACTCGTTCGGTGGGCAATCTGGCA---
CCCCAATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCTTTTGGTGATGATGATGCGGATAGGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGACGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAAATACTCT-GAT--T--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAATGGAAATTAATCT---GTCCTTCATATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAGGGGATATCAGCTTCAGGAAATAAAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAA----
CAATGCTCT-GGCTACGTGGAATCAAACCTTCAAATTCATATGCAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATCTATT----AGGAAAAAAAAAAA-------
TCTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGTCTCTGTGTTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Bactris_coloniata_PL98"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCACTCGTTCGGTGGGCAATCTGGCA---
CCCCAATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCTTTTGGTGATGATGATGCGGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGACGAACCCGATGCTAAGCGTTGGTAA---GCTTCTCCGT-GAGAAATACTCT-GAT--T--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAATGGAAATTAATCA---GTCCTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAGGGGATATCAGCTTCAGGAAATAAAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAA----
CAATGCTCT-GGCTACGTGGAATCAAACCTTCAAATTCATATGCGG-TTTTACGTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATCTATT----AGGAAAAAAAAAA--------
TCTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGTCTCTGTGTTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Bactris_concinna_PL106"/>
--------------------------------------------------------------------------------------------------------------------------------------------
AGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---GAAGACGAACCCGATGCTAAGCGTTGGTAA---
GCTTCTCCGT-GAGAAATACTCT-GAT--T--GTAAAATG-ACTCAAAAGTCCT---G--
TAAATTTGAATGGAAATTAATCA---GTCCTTCTTATTCTTT-CCAGGAAGAAAGAAGGTGAG---
AATGAGGGGATATCAGCTTCAGGAAATAAAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAA----
CAATGCTCT-GGCTACGTGGAATCAAACCTTCAAATTCATATGCAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATCTATT----AGGAAAAAAAAAA--------
TCTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGTCTCTGTGTTATGATCAATAGGAGCTACTACAAA----------
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL92"/>
----------GCTTCTCTCCATTCTGAAGCATCCGATCACTCGTTCGGTGGGAAATCGGGCA---
CCCCAATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTCGGTGATGATGATGTGGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTGGGTAA---GCTTCTCCAT-GAGAAATACTAT-GAT--T--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAAYGGRAATTAATCA---GTCCTTCATATTCTTT-
CCAGGAAGAAAGAAGGTGAT---
AGTGAGGTGATATCAGCTTCGGGAAATAGAACYGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Bactris_gasipaes_PL93"/>
----------GCTTCTCTCCNTTCTGAAGCATCCGATCACTCGTTCGGTGGGAAATCGGGCA---
CCCCAATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTCGGTGATGATGATGTGGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTGGGTAA---GCTTCTCCAT-GAGAAATACTAT-GAT--T--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAANGGRAATTAATCA---GTCCTTCATATTCTTT-
CCAGGAAGAAAGAAGGTGAT---
AGTGAGGTGATATCAGCTTCGGGAAATAGAACCGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATCATCTAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Bactris_major_PL114"/>
---------GGGTTCTCTCCATTCTGAAGCATCCGATCACTCGTTCGGTGGGCAATCTGGCA---
CCCCAATCGACTCCGTTGCGACGCCYGACAATTCCTCARTTTCTTTTGGTGATGATGATGCGGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGACGAACCCGATGCTAAGCGTTGGTAA---GCTTCTCCGT-GAGAAATACTCT-GAT--T--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAATGGAAATTAATCA---GTCCTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAGGGGATATCAGCTTCAGGAAATAAAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CCGTTAACATGTGAAASGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAA----
CAATGCTCT-GGCTACGTGGAATCAAACCTTCAAATTCATATGCRG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATCTATT----AGGAAAAAAAAAA--------
TCTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGTCTCTGTGTTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Bactris_mexicana_PL88"/>
-------------------------------------------------------------------
CCAATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTCGGTGATGATGATGTGGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTAAT---
GAAGATGAACCCGATGCAAAGCGTGGGTAA---GCTTCTCCAT-GAGAAATACTAT-GAT--T--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAATGGAAATTAATCA---GTCCTTCATATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAGGTGATATCAGCTTCAGGAAATAGAACTGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GGCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTTGGTAATTCTCATAAGAA-TATCTATT----AGGAAAAAAAAAAAAAAAA--
TCTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGCCTGTGTGTTATGATCAATAGGAGCTACTACA------------
</sequence>
<sequence>
<taxon idref="Bactris_militaris_PL109"/>
----------GGTTCTCTCCATTCTGAAGCATCCGATCACTCGTTCGGTGGGCAATCTGGCA---
CCCCAATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTCGGTGATGATGATGTGGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTCAT---
GAAGATGAACCCGATGCAAAGCGTGGGTAA---GCTTCTCCAT-GAGAAATACTAT-GAT--T--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAATGGAAATTAATCA---GTCCTTCATATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAGGTGATATCAGCTTCAGGAAATAGAACTGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAA----
CAATGCTCT-GGCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTTGGTAATTCTCATAAGAA-TATCTATT----AGGGAAAAAAAAAAAAAA---
TCTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGCCTGTGTGTTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Bactris_plumeriana_PL99"/>
----------GGTTCTCTCCATTCTGAAGCATCCGATCACTCGTTCGGTGGGCAATCTGGCA---
CCCCAATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTCGGTGATGATGATGTGGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTGGGTAA---GCTTCTCCAT-GAGAAATACTAT-GAT--T--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAATGGAAATTAATCA---GTCCTTCATATTCTTT-
CCAGGAAGAAACAAGGTGAG---
AATGAGGTGATATCAGCTTCAGGAAATAGAACTGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GGCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCTCTCTTTGGTAATTCTCATAAGAA-TATCTATT----AGGAAAAAAAAAAAAAAAA--
TCTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGCCTCTGTGTTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Bactris_sp_PL80"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCACTCGTTCGGTGGGCAATCTGGCA---
CCCCAATCGACTCCGTTGCGACGCCCGACAATTCCTCAATTTCTTTTGGTGATGATGATGCGGATATGAGCTCGCAGAGGAGCAATCCTGGAGGTGTTGACTTTGAT---
GAAGACGAACCCGATGCTAAGCGTTGGTAA---GCTTCTCCGT-GAGAAATACTCT-GAT--C--
GTAAAATG-ACTCAAAAGTCCT---G--TAAATTTGAATGGAAATTAATCA---GTCCTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAGGGGATATCAGCTTCAGGAAATAAAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAA----
CAATGCTCT-GGCTACGTGGAATCAAACCTTCAAATTCATATGCGG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATCTATT----AGGAAAAAAAAAA--------
TCTTGACC-
TGGTCTGTTTTCTTATCATTTAAATGTCTCTGTGTTATGATCAATAGGAGCTACTACAA-----------
</sequence>
<sequence>
<taxon idref="Barcella_odora_PL121"/>
GGCAATTCAAGCTTCTCTCCATTCTGAAGCATCCGATCATTCATTCGGTGGGCGATCTGGCA---
CCCCGATCGACTCCGTTGCGACACCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGTTGATATGAGCTCGCAGAAGAGCAATCCTGGAGGGGTTGACTTGGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAAAATTACTCT-GAC--T--
GTAAAATG-ACTT-GAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTTTTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTTGACGATGGGTATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TGC----CTGTTAACATGTGAAATGTTGGATA--
TTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTCGCCACTGTGCAAGAAACCAAGCAAG----
CAATACTCT-GGCTACGTTGAATCAAAACTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----
AGAAAAAA--------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Beccariophoenix_madagascariensis_PL47"/>
----------GGTTCTCTCCAATCTGAAGCATCCGATCATTCGGTCGGTGGGCGATCTGGCA---
CCCTGATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGTTGATATGAGCTCGCAGAGGAGCAATCCTGGACGTGTTGACTTTGCT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATG-ACT-TGAAGTCTT---G--TAAGTTTGAATGGAAATTAATCA---GTCGTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGCTGGAGAAAATATGGACAGAAGGTGGTGAAAGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----
CTATTAACATGTGAAATGTTTGACATATTGGAGCTAGGCCTTCAAACACGTTGCACAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAG----
CAATACTCT-GGCTACGTAGAATCAAAACTTCACATTCATTTGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAGTTCTCATAAGAA-TATTTATT----AGATCAAA-------------
TGTTGTCC-AGCTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Cocos_nucifera"/>
----------------------------GCATCCGATCATTCGTTCCGTGGGCGATCTGGCA--
CCCCCGATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGTCGATATGAGCTCGCAGAGGAGCAATCCTGGACGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAGTTATTCG-GAT--T--
ATAAAATG-ACT-TGAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCGTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGATGATGGGTATCGCTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGAAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----
CTATTAACATGTGAAATGTTTGACATATTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGC-
AG----CAAAACTCTGGGCTACGTAGAATCAAAACTTCACATTCATATGAAG-TTTTGCCTA---A-
GCTGG-TCT--
GTTGG---------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Desmoncus_orthacanthos_PL100"/>
----------GGTTCTCTCCATTCTGAAGGATCCGATCATTCGTTCGGTGGGCAATCTGGCA---
ACCCAATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGTTGATAGGAGCTCGCAGAGGAGCAATCCTGGACGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
ATAAAATG-ACTCAAAAGTCTT---G--TAAATTTGAATGGAGATTAATCA---GTCCTCCTTATTCTGT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGCGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAACYAAC----
CAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_PL90"/>
--------------------------------------------------------------------------------------------------------------------------------------------------
GC-ATCCTGGACGTGTTGACTTTGAT---GAAGATGAACCCGATGCAAAGCGTTGGTAA---
GCTTCTCCAT-GAGAATTACTCT-GAT--T--ATAAAATG-ACTC-AAAGTCTT---G--
TAAATTTGAATGGAGATTAATCA---GTCCTCCTTATTCTTT-CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGCGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAARGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GCCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATTT---GGATAAAAAAAAAAAAA----
TCTTGTCC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAA-----------
</sequence>
<sequence>
<taxon idref="Desmoncus_polyacanthos_var_prunifer_PL115"/>
-------------TCTCTCGGTTCTGAAGGATCCGATCATTCGTTCGGTGGGCAATCTGGCA---
ACCCAATCGACTCCGTTGCGACGCCTGACAATTCMTCAGTTTCCTTTGGTGATGATGATGTTGATATGAGCTCGCAGAGGAGCAATCCTGGACGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
ATAAAATG-ACTC-AAAGTCTT---G--TAAATTTGAATGGAGATTAATCA---GTCCTCCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGCGATATCGATATCCTCGACGATGGATATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAARGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----CTGTTAACATGTGAAACGTTGGACA--
TTGAAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACTGTGCAAGAAACTAAGCAAC----
CAATGCTCT-GCCTACGTAGAATCAAACCTTCAAATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATTT---GGATRAAAAAAAAAAAAAA--
TCTTGTCC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAA---
</sequence>
<sequence>
<taxon idref="Elaeis_guineensis_PL124"/>
GGCAATTCAGGGTTCTCTCCATTCTGAAGCATCCGATCATTCATTCGGTGGGCGATCTGGCA---
CCCCGATCGACTCCGTTGCGACACCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGTTGATATGAGCTCGCAGAAGAGCAATCCCGGAGGGGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTGA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATG-ACTT-GAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTTTTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAATTA----
CTTCATC---TAC----CTGTTAACACGTGAAATGTTGGATA--
TTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTCGCCACTGTGCAAGAAACCAAGCAAG----
CAATACTCT-GGCTACGTTGAATCAAAACTTCAAATTCATATGAAG-TTTTGCCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAA------------
TCTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL110"/>
GGCAATTCAAGCTTCTCTCCATTCTGAAGCATCCGATCATTCATTCGGTGGGCGATCTGGCA---
CCCCGATCGACTCCGTTGCGACACCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGTTGATATGAGCTCGCAGAAGAGCAATCCCGGAGGGGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTTTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATG-GCTT-GAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTTTTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGAAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAC----CTGTTAACATGTGAAATGTTGGATA--
TTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTCGCCACTGTGCAAGAAACCAAGCAAG----
CAATACTCT-GGCTACGTTGAATCAAAACTTCAAATTCATATGAAG-TTTTGCCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAA------------
TCTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCCCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Elaeis_oleifera_PL87"/>
GGCAATTCAAGCTTCTCTCCATTCTGAAGCATCCGATCATTCATTCGGTGGGCGATCTGGCA---
CCCCGATCGACTCCGTTGCGACACCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGTTGATATGAGCTCGCAGAAGAGCAATCCCGGAGGGGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTTTCCAT-GAGAATTACTCT-GAT--T--
GTAAAATG-GCTT-GAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTTTTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGGTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGAAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAC----CTGTTAACATGTGAAATGTTGGATA--
TTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTCGCCACTGTGCAAGAAACCAAGCAAG----
CAATACTCT-GGCTACGTTGAATCAAAACTTCAAATTCATATGAAG-TTTTGCCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----AGAAAAAAA------------
TCTTGACC-TGGTCTGTTTTCTTATCATTTAAATGCCCCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Jubaea_chilensis_PL62"/>
-----------GTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCGATCTGGCA---
CCCCGATCGACTCCGTTGCGACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGTCGATACGAGCTCGAAGAGGAGCAATCCTGGACGTGTTGACTTTGAT---
GAAGATGAACCCGAAGCAAAGCGCTGGTAA---GCTTCTCCAT-GAGAATTACTCT-GAT--T--
ATAAAATG-ACT-TGAAGTCTT---G--TAA-TTTGAATGGAAATTAATCA---GTCCTCCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGCTGGAGAAAATATGGACAGAAGGTGGTGAAAGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TGG----
CTATTAACATATGAAATGTTTGACATATTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAG----
CAATACTCT-GGCTACGTAGAATCAAAACTTCACATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATCCTCATAAGAA-TATTTACT----AAATCAAA-------------
CGTTGTCC-AGGTCTGTTTTCTTATCATTTAAATGACTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Parajubaea_torallyi_PL64"/>
----------GGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCGATCTGGCA---
CCCCGATCGACTCCGTTGCAACACCTGACAATTCCTCAGTTTCCTTTGGTGATGATGATGTCGATATGAGCTCAAAGAGGAGCAATCCTGGACGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCAT-GAGAATTATTCT-GAT--T--
ATAAAATG-ACT-CGAAGTCTT---G--TAAATTTGAATGGAAATTGATCA---GTCGTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATGTCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGCTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----
CTATTAACATGTGAAATGTTTGACATATTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCTACCGTGCAAGAAACTAATTAAGCAAGCAATACTCT-
GGCTACGTAGAATCAAAACTTCACATTCATATGAAGTTTTTACCTA---A-GCTAGTTCT--
GTTGGGTAATTCTCATAAGAA-TATTTACT----AAATCAAA-------------CGTTGTCC-
CGGTCTGTTTTCTTATCATTTAAATGCCTCTG--TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Reinhardtia_gracilis_var_rostrata_PL119"/>
GGCAATTCAGGGTTCTCTCCATTCCGAAGCATCCGATCATTCGTTCGGTGATCGATCGGGCA---
CCCCGATCGACTCTGTTGCGACACCTGATAATTCCTCGGTTTCCTTTGGTGATGATGATGCTGATATGAGCTCGCGGAGGAGCAATCCTGGGGGTGTTGAT---------
GAAGATGAACCTGATGCAAAGCGTTGGTAA---GCCTCTCCAT-GAGAATTACTCC-
GATCGTACTTAACATG-AATT-GAAGTCTT---G--TAAATTTGAATGGAAATTAATCA---GTCCT---
TACCCTTT-GCAGGAAGAAAGAAGGCGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTTGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGGTGGAGAAAATATGGACAGAAGGTGGTGAAGGGCAATCCAAATCCAAGGTGAGAAAATA----
CTTCATC---TAGCTATATATTAACATGTGAAATGTTTGACA--
TTGGAGCTAGGCCTTCAAACACGTTGCGCAAACTAGCCTCGTGGCCAGTGTGCAACAAACTAAGCAAG----
CAATGCACT-GGCTACGTAGAATCCAAACTTCACATTCATATGAAG-
TTTTACCTAGCTAGGCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTATT----
AGATCAAAC-------------GATGGCC-TGGGCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCGATAGGAGCTATTACAA-----------
</sequence>
<sequence>
<taxon idref="Reinhardtia_latisecta_PL120"/>
GGGAATTCAGGGTCCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCGATCGGGCA---
CCCTGATCGACTCCGTTGCAACGCCTGACAATTCCTCAGTTTCCTTTGGTGATGACGATGCTGATATGAGCTCGCAGAGGAGCAA-
CCTGGGGGTGTTGACCTTGCT---GAAGATGAACCTGAAGCCAAGCGTTGGTAA---GCTTCTCCAT-
GAGTATTGTTCT-GA-TGG---TAAAATG-ACTT-GAACTCTT---G--
TAAATTTGAATGGAAATTAATCA---GGCCTTTCTTATTCTTTCCAGGAAGAAAGAAGGTGAG---
AACGAAGGGATACCAGYTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGGTGGAGAAAATATGGGCAGAAGGTGGTCAAGGGCAACCCAAATCCAAGGTGAGCAAACA----
CTTGACC---TAGCTA---ATTAACATTTGAAATGTTTGACA--
TTAGATTTAGGCCTTCAAACATGTTGC-
CAAACTAGCCTCGTGGCCACCGTGCATGAAACTAAGCAAG----CAACAATCA-
GGCTACGTAGAATCAAAACGTCACATGAATGTGAAG-TTTTACTTAAAT---CTTGTTCT--
GTTGGTTAATTCTCGCAAGAA-TATTTGTT----AGATCAAATG-------------GTGGTG-
TGGTCTGTTTTCTTATCATTTAAATGCCTCTG--TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Roystonea_borinquena_PL122"/>
GGCAATTCAGAGTTCCATCTCTTATGAAGCATATGATCATTCCTTCGCGGGCCAAGCAGGCA---
CCCCGATCGACTCGGTTGCGACGCCTGACAATTCCTCAATTTCCTTTGGCGATGATGACAACAATATGAGCTCGCAGAGGAGCAATTCCAGAGGAGATGACTTTGAT---
GAAGAAGAACCCGATGCCAAGCGTTGGTGA---GCTTCTTGAT-TAGAATTGCTTT-TTATGG--TTAAC-
TG-A-TCACTTGAATTGATG--TAAATTGGAACAGAAATTAATTA---GGCTTTCTTATTGTTT-
TCAGGAAGAAAGAAGGTGGTGAGAATGAGGGGATATCAGCTTCAGGAAATAAGACAGTGAGGGAACCAAGGGTGGTGGTTCAGACCACAAGCGACATCGATATCCTTGATGATGGATATCGGTGGAGAAAGTATGGACAGAAGGTGGTGAAGGGGAATCCAAATCCAAGG--------
TACATGCTTCATC---TAG----CTCTTAACATGTGAAA------------------------------
CATGTTGCACAAACTAGCCTTGTGGCTCATTTGCAAGAAGCTGACCAAG----CGTCATACT-
GGCT----------------------TTATGTGAAG-TTTTTCTTATATTAGA----TCT--
GTTGGGTGATTCTCATATCAT-
GTTTATTG------------------------------------------------------------
CC--TG--TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Roystonea_oleracea_PL123"/>
GGCAATTCAGAGTTCCATCTCTTATGAAGCATATGATCATTCCTTCGCGGGCCAAGCAGGCA---
CCCCGATCGATTCGGTTGCGACGCCTGACAATTCCTCAATTTCCTTTGGCGATGATGACAACAATATGAGCTCGCAGAGGAGCAATTCCAGAGGAGATGACTTTGAT---
GAAGAAGAACCCGATGCCAAGCGTTGGTGA---GCTTCTTGAT-TAGAATTGC-TT-TTATGG--TGAAC-
TG-A-TCACTTGAATTGATGTATAAATTGGAACAGAAATCAATTA---GGCTTTCTTATTGTTT-
TCAGGAAGAAAGAAGGTGGTGAGAATGAGGGGATATCAGCTTCAGGAAATAAGACAGTGAGGGAACCAAGGGTGGTGGTTCAGACCACAAGCGACATCGATATCCTTGATGATGGATATCGGTGGAGAAAGTATGGACAGAAGGTGGTGAAGGGGAATCCAAATCCAAGG--------
TACATGCTTCATC---TAG----CTCTTAACATGTGAAA------------------------------
CATGTTGCACAAACTAGCCTTGTGGCTCATTTGCAAGAAGCTGACCAAG----CATCATACT-
GGCT----------------------TTATGTGAAG-TTTTTCTTATATCAGA----TCT--
ATTGGGTGATTCTCATATCAT-GTTTATTG------ATCAAAA------------TTTTGGCA-
TGGTTTGTATTCGTGTTATTTAAACGCC-C-G--TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
<sequence>
<taxon idref="Syagrus_romanzoffiana_PL27"/>
----------GGTTCTCTCCATTCTGAAGCATCCGATCATTCGTTCGGTGGGCGATCTGGCA---
CCCCGATCGACTCCGTTGCGACGCCTGACAATTCCTCAGCTTCCTTTGGTGATGACGATGTCGATATGAGCTCTCACAAGAGCCATCCTGGACGTGTTGACTTTGAT---
GAAGATGAACCCGATGCAAAGCGTTGGTAA---GCTTCTCCATTGAGAATTACTTT-GAC--T--
ATAAAATGGACT-TGAAGTCTT---G--TAA-TTTGAATGGAAATTGATCAGTCGTCGTTCTTATTCTTT-
CCAGGAAGAAAGAAGGTGAG---
AATGAAGGGATATCAGCTTCAGGAAATAGAACAGTGAGGGAACCCAGGGTGGTGGTTCAGACCACAAGTGATATCGATATCCTCGACGATGGGTATCGCTGGAGAAAATATGGACAGAAGGTGGTGAAAGGCAATCCAAATCCAAGGTGAGCAAATA----
CTTCATC---TAG----
CTATTAACATGTGAAATGTTTGACATATTGGAGCTAGGCCTTCAAACACGTTGCGCAAGCTAGCCTTGTGGCCACCGTGCAAGAAACTAAGCAAG----
CAATACTCT-GGCTACGTAGAACCAAAACTTCACATTCATATGAAG-TTTTACCTA---A-
GCTGGTTCT--GTTGGGTAATTCTCATAAGAA-TATTTACT----AAATCAAA-------------
CGTTGTCC-AGGTCTGTTTTCTTATCATTTAAATGCCTCTG--
TTATGATCAATAGGAGCTACTACAAATGCACAACTG
</sequence>
</alignment>

<!-- The unique patterns from 1 to
end -->
<!--
npatterns=320
-->
<patterns id="W12spiny47OTU.patterns" from="1">
<alignment idref="alignment1"/>
</patterns>

<!-- The unique patterns from 1 to
end -->
<!--
npatterns=529
-->
<patterns id="W16spiny47OTU.patterns" from="1">
<alignment idref="alignment2"/>
</patterns>

<!-- The unique patterns from 1 to
end -->
<!--
npatterns=453
-->
<patterns id="W19spiny47OTU.patterns" from="1">
<alignment idref="alignment3"/>
</patterns>

<!-- The unique patterns from 1 to
end -->
<!--
npatterns=856
-->
<patterns id="W21spiny47OTU.patterns" from="1">
<alignment idref="alignment4"/>
</patterns>

<!-- The unique patterns from 1 to
end -->
<!--
npatterns=341
-->
<patterns id="W6spiny47OTU.patterns" from="1">
<alignment idref="alignment5"/>
</patterns>

<!-- The unique patterns from 1 to
end -->
<!--
npatterns=440
-->
<patterns id="W7spiny47OTU.patterns" from="1">
<alignment idref="alignment6"/>
</patterns>

<!-- A prior assumption that the population size has remained
constant -->

<!-- throughout the time spanned by the
genealogy. -->
<constantSize id="constant" units="substitutions">
<populationSize>
<parameter id="constant.popSize" value="0.041" lower="0.0"/>
</populationSize>
</constantSize>

<!-- The user-specified starting tree in a newick tree
format. -->
<newick id="startingTree" usingDates="false">
(((((((((((Acrocomia_aculeata_PL75:0.0,Acrocomia_aculeata_PL76:0.0):
0.0,Acrocomia_aculeata_PL77:0.0):0.0,Acrocomia_intumescens_PL78:0.0):
0.0,Acrocomia_crispa_PL116:0.0):0.0,
(((Aiphanes_horrida_PL112:0.0,Aiphanes_minima_PL111:0.0):
0.0,Aiphanes_ulei_PL107:0.0):0.0,
((((Astrocaryum_alatum_PL102:0.0,Astrocaryum_alatum_PL95:0.0):0.0,
(Astrocaryum_mexicanum_PL104:0.0,
(Astrocaryum_mexicanum_PL85:0.0,Astrocaryum_mexicanum_PL86:0.0):0.0):
0.0):0.0,((((Astrocaryum_murumuru_PL108:0.0,Astrocaryum_sp_PL97:0.0):
0.0,Astrocaryum_murumuru_PL94:0.0):0.0,
(Astrocaryum_standleyanum_PL101:0.0,Astrocaryum_standleyanum_PL117:0.0):
0.0):0.0,Astrocaryum_sp_PL96:0.0):0.0):0.0,
((Bactris_brongniartii_PL83:0.0,(Bactris_cf_maraja_PL113:0.0,
((Bactris_coloniata_PL98:0.0,Bactris_concinna_PL106:0.0):0.0,
(Bactris_major_PL114:0.0,Bactris_sp_PL80:0.0):0.0):0.0):0.0):0.0,
(((Bactris_gasipaes_PL92:0.0,Bactris_gasipaes_PL93:0.0):0.0,
(Bactris_mexicana_PL88:0.0,Bactris_militaris_PL109:0.0):0.0):
0.0,Bactris_plumeriana_PL99:0.0):0.0):0.0):0.0):0.0):0.0,
(Desmoncus_orthacanthos_PL100:0.0,
(Desmoncus_polyacanthos_PL90:0.0,Desmoncus_polyacanthos_var_prunifer_PL115:0.0):
0.0):0.0):0.0,(Barcella_odora_PL121:0.0,(Elaeis_guineensis_PL124:0.0,
(Elaeis_oleifera_PL110:0.0,Elaeis_oleifera_PL87:0.0):0.0):0.0):0.0):
0.0,(((Attalea_crassispatha_PL21:0.0,
(Jubaea_chilensis_PL62:0.0,Parajubaea_torallyi_PL64:0.0):0.0):0.0,
(Cocos_nucifera:0.0,Syagrus_romanzoffiana_PL27:0.0):0.0):
0.0,Beccariophoenix_madagascariensis_PL47:0.0):0.0):
0.0,Reinhardtia_gracilis_var_rostrata_PL119:0.0):
0.0,Reinhardtia_latisecta_PL120:0.0):0.0,
(Roystonea_borinquena_PL122:0.0,Roystonea_oleracea_PL123:0.0):0.0);
</newick>

<!-- Generate a tree
model -->
<treeModel id="treeModel">
<tree idref="startingTree"/>
<rootHeight>
<parameter id="treeModel.rootHeight"/>
</rootHeight>
<nodeHeights internalNodes="true">
<parameter id="treeModel.internalNodeHeights"/>
</nodeHeights>
<nodeHeights internalNodes="true" rootNode="true">
<parameter id="treeModel.allInternalNodeHeights"/>
</nodeHeights>
</treeModel>

<!-- The uncorrelated relaxed clock (Drummond, Ho, Phillips & Rambaut
(2006) PLoS Biology 4, e88 )-->
<discretizedBranchRates id="W12spiny47OTU.branchRates">
<treeModel idref="treeModel"/>
<distribution>
<logNormalDistributionModel meanInRealSpace="true">
<mean>
<parameter id="W12spiny47OTU.ucld.mean" value="1.0"/>
</mean>
<stdev>
<parameter id="W12spiny47OTU.ucld.stdev"
value="0.3333333333333333" lower="0.0"/>
</stdev>
</logNormalDistributionModel>
</distribution>
<rateCategories>
<parameter id="W12spiny47OTU.branchRates.categories"/>
</rateCategories>
</discretizedBranchRates>
<rateStatistic id="W12spiny47OTU.meanRate"
name="W12spiny47OTU.meanRate" mode="mean" internal="true"
external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W12spiny47OTU.branchRates"/>
</rateStatistic>
<rateStatistic id="W12spiny47OTU.coefficientOfVariation"
name="W12spiny47OTU.coefficientOfVariation"
mode="coefficientOfVariation" internal="true" external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W12spiny47OTU.branchRates"/>
</rateStatistic>
<rateCovarianceStatistic id="W12spiny47OTU.covariance"
name="W12spiny47OTU.covariance">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W12spiny47OTU.branchRates"/>
</rateCovarianceStatistic>

<!-- The uncorrelated relaxed clock (Drummond, Ho, Phillips & Rambaut
(2006) PLoS Biology 4, e88 )-->
<discretizedBranchRates id="W16spiny47OTU.branchRates">
<treeModel idref="treeModel"/>
<distribution>
<logNormalDistributionModel meanInRealSpace="true">
<mean>
<parameter id="W16spiny47OTU.ucld.mean" value="1.0" lower="0.0"/>
</mean>
<stdev>
<parameter id="W16spiny47OTU.ucld.stdev"
value="0.3333333333333333" lower="0.0"/>
</stdev>
</logNormalDistributionModel>
</distribution>
<rateCategories>
<parameter id="W16spiny47OTU.branchRates.categories"/>
</rateCategories>
</discretizedBranchRates>
<rateStatistic id="W16spiny47OTU.meanRate"
name="W16spiny47OTU.meanRate" mode="mean" internal="true"
external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W16spiny47OTU.branchRates"/>
</rateStatistic>
<rateStatistic id="W16spiny47OTU.coefficientOfVariation"
name="W16spiny47OTU.coefficientOfVariation"
mode="coefficientOfVariation" internal="true" external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W16spiny47OTU.branchRates"/>
</rateStatistic>
<rateCovarianceStatistic id="W16spiny47OTU.covariance"
name="W16spiny47OTU.covariance">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W16spiny47OTU.branchRates"/>
</rateCovarianceStatistic>

<!-- The uncorrelated relaxed clock (Drummond, Ho, Phillips & Rambaut
(2006) PLoS Biology 4, e88 )-->
<discretizedBranchRates id="W19spiny47OTU.branchRates">
<treeModel idref="treeModel"/>
<distribution>
<logNormalDistributionModel meanInRealSpace="true">
<mean>
<parameter id="W19spiny47OTU.ucld.mean" value="1.0" lower="0.0"/>
</mean>
<stdev>
<parameter id="W19spiny47OTU.ucld.stdev"
value="0.3333333333333333" lower="0.0"/>
</stdev>
</logNormalDistributionModel>
</distribution>
<rateCategories>
<parameter id="W19spiny47OTU.branchRates.categories"/>
</rateCategories>
</discretizedBranchRates>
<rateStatistic id="W19spiny47OTU.meanRate"
name="W19spiny47OTU.meanRate" mode="mean" internal="true"
external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W19spiny47OTU.branchRates"/>
</rateStatistic>
<rateStatistic id="W19spiny47OTU.coefficientOfVariation"
name="W19spiny47OTU.coefficientOfVariation"
mode="coefficientOfVariation" internal="true" external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W19spiny47OTU.branchRates"/>
</rateStatistic>
<rateCovarianceStatistic id="W19spiny47OTU.covariance"
name="W19spiny47OTU.covariance">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W19spiny47OTU.branchRates"/>
</rateCovarianceStatistic>

<!-- The uncorrelated relaxed clock (Drummond, Ho, Phillips & Rambaut
(2006) PLoS Biology 4, e88 )-->
<discretizedBranchRates id="W21spiny47OTU.branchRates">
<treeModel idref="treeModel"/>
<distribution>
<logNormalDistributionModel meanInRealSpace="true">
<mean>
<parameter id="W21spiny47OTU.ucld.mean" value="1.0" lower="0.0"/>
</mean>
<stdev>
<parameter id="W21spiny47OTU.ucld.stdev"
value="0.3333333333333333" lower="0.0"/>
</stdev>
</logNormalDistributionModel>
</distribution>
<rateCategories>
<parameter id="W21spiny47OTU.branchRates.categories"/>
</rateCategories>
</discretizedBranchRates>
<rateStatistic id="W21spiny47OTU.meanRate"
name="W21spiny47OTU.meanRate" mode="mean" internal="true"
external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W21spiny47OTU.branchRates"/>
</rateStatistic>
<rateStatistic id="W21spiny47OTU.coefficientOfVariation"
name="W21spiny47OTU.coefficientOfVariation"
mode="coefficientOfVariation" internal="true" external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W21spiny47OTU.branchRates"/>
</rateStatistic>
<rateCovarianceStatistic id="W21spiny47OTU.covariance"
name="W21spiny47OTU.covariance">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W21spiny47OTU.branchRates"/>
</rateCovarianceStatistic>

<!-- The uncorrelated relaxed clock (Drummond, Ho, Phillips & Rambaut
(2006) PLoS Biology 4, e88 )-->
<discretizedBranchRates id="W6spiny47OTU.branchRates">
<treeModel idref="treeModel"/>
<distribution>
<logNormalDistributionModel meanInRealSpace="true">
<mean>
<parameter id="W6spiny47OTU.ucld.mean" value="1.0" lower="0.0"/>
</mean>
<stdev>
<parameter id="W6spiny47OTU.ucld.stdev"
value="0.3333333333333333" lower="0.0"/>
</stdev>
</logNormalDistributionModel>
</distribution>
<rateCategories>
<parameter id="W6spiny47OTU.branchRates.categories"/>
</rateCategories>
</discretizedBranchRates>
<rateStatistic id="W6spiny47OTU.meanRate"
name="W6spiny47OTU.meanRate" mode="mean" internal="true"
external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W6spiny47OTU.branchRates"/>
</rateStatistic>
<rateStatistic id="W6spiny47OTU.coefficientOfVariation"
name="W6spiny47OTU.coefficientOfVariation"
mode="coefficientOfVariation" internal="true" external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W6spiny47OTU.branchRates"/>
</rateStatistic>
<rateCovarianceStatistic id="W6spiny47OTU.covariance"
name="W6spiny47OTU.covariance">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W6spiny47OTU.branchRates"/>
</rateCovarianceStatistic>

<!-- The uncorrelated relaxed clock (Drummond, Ho, Phillips & Rambaut
(2006) PLoS Biology 4, e88 )-->
<discretizedBranchRates id="W7spiny47OTU.branchRates">
<treeModel idref="treeModel"/>
<distribution>
<logNormalDistributionModel meanInRealSpace="true">
<mean>
<parameter id="W7spiny47OTU.ucld.mean" value="1.0" lower="0.0"/>
</mean>
<stdev>
<parameter id="W7spiny47OTU.ucld.stdev"
value="0.3333333333333333" lower="0.0"/>
</stdev>
</logNormalDistributionModel>
</distribution>
<rateCategories>
<parameter id="W7spiny47OTU.branchRates.categories"/>
</rateCategories>
</discretizedBranchRates>
<rateStatistic id="W7spiny47OTU.meanRate"
name="W7spiny47OTU.meanRate" mode="mean" internal="true"
external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W7spiny47OTU.branchRates"/>
</rateStatistic>
<rateStatistic id="W7spiny47OTU.coefficientOfVariation"
name="W7spiny47OTU.coefficientOfVariation"
mode="coefficientOfVariation" internal="true" external="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W7spiny47OTU.branchRates"/>
</rateStatistic>
<rateCovarianceStatistic id="W7spiny47OTU.covariance"
name="W7spiny47OTU.covariance">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W7spiny47OTU.branchRates"/>
</rateCovarianceStatistic>

<!-- The HKY substitution model (Hasegawa, Kishino & Yano,
1985) -->
<HKYModel id="W12spiny47OTU.hky">
<frequencies>
<frequencyModel dataType="nucleotide">
<frequencies>
<parameter id="W12spiny47OTU.frequencies" value="0.25 0.25 0.25
0.25"/>
</frequencies>
</frequencyModel>
</frequencies>
<kappa>
<parameter id="W12spiny47OTU.kappa" value="2.0" lower="0.0"/>
</kappa>
</HKYModel>

<!-- site
model -->
<siteModel id="W12spiny47OTU.siteModel">
<substitutionModel>
<HKYModel idref="W12spiny47OTU.hky"/>
</substitutionModel>
<gammaShape gammaCategories="8">
<parameter id="W12spiny47OTU.alpha" value="0.5" lower="0.0"/>
</gammaShape>
</siteModel>

<!-- The HKY substitution model (Hasegawa, Kishino & Yano,
1985) -->
<HKYModel id="W16spiny47OTU.hky">
<frequencies>
<frequencyModel dataType="nucleotide">
<frequencies>
<parameter id="W16spiny47OTU.frequencies" value="0.25 0.25 0.25
0.25"/>
</frequencies>
</frequencyModel>
</frequencies>
<kappa>
<parameter id="W16spiny47OTU.kappa" value="2.0" lower="0.0"/>
</kappa>
</HKYModel>

<!-- site
model -->
<siteModel id="W16spiny47OTU.siteModel">
<substitutionModel>
<HKYModel idref="W16spiny47OTU.hky"/>
</substitutionModel>
<gammaShape gammaCategories="8">
<parameter id="W16spiny47OTU.alpha" value="0.5" lower="0.0"/>
</gammaShape>
</siteModel>

<!-- The HKY substitution model (Hasegawa, Kishino & Yano,
1985) -->
<HKYModel id="W19spiny47OTU.hky">
<frequencies>
<frequencyModel dataType="nucleotide">
<frequencies>
<parameter id="W19spiny47OTU.frequencies" value="0.25 0.25 0.25
0.25"/>
</frequencies>
</frequencyModel>
</frequencies>
<kappa>
<parameter id="W19spiny47OTU.kappa" value="2.0" lower="0.0"/>
</kappa>
</HKYModel>

<!-- site
model -->
<siteModel id="W19spiny47OTU.siteModel">
<substitutionModel>
<HKYModel idref="W19spiny47OTU.hky"/>
</substitutionModel>
<gammaShape gammaCategories="8">
<parameter id="W19spiny47OTU.alpha" value="0.5" lower="0.0"/>
</gammaShape>
</siteModel>

<!-- The HKY substitution model (Hasegawa, Kishino & Yano,
1985) -->
<HKYModel id="W21spiny47OTU.hky">
<frequencies>
<frequencyModel dataType="nucleotide">
<frequencies>
<parameter id="W21spiny47OTU.frequencies" value="0.25 0.25 0.25
0.25"/>
</frequencies>
</frequencyModel>
</frequencies>
<kappa>
<parameter id="W21spiny47OTU.kappa" value="2.0" lower="0.0"/>
</kappa>
</HKYModel>

<!-- site
model -->
<siteModel id="W21spiny47OTU.siteModel">
<substitutionModel>
<HKYModel idref="W21spiny47OTU.hky"/>
</substitutionModel>
<gammaShape gammaCategories="8">
<parameter id="W21spiny47OTU.alpha" value="0.5" lower="0.0"/>
</gammaShape>
</siteModel>

<!-- The HKY substitution model (Hasegawa, Kishino & Yano,
1985) -->
<HKYModel id="W6spiny47OTU.hky">
<frequencies>
<frequencyModel dataType="nucleotide">
<frequencies>
<parameter id="W6spiny47OTU.frequencies" value="0.25 0.25 0.25
0.25"/>
</frequencies>
</frequencyModel>
</frequencies>
<kappa>
<parameter id="W6spiny47OTU.kappa" value="2.0" lower="0.0"/>
</kappa>
</HKYModel>

<!-- site
model -->
<siteModel id="W6spiny47OTU.siteModel">
<substitutionModel>
<HKYModel idref="W6spiny47OTU.hky"/>
</substitutionModel>
</siteModel>

<!-- The HKY substitution model (Hasegawa, Kishino & Yano,
1985) -->
<HKYModel id="W7spiny47OTU.hky">
<frequencies>
<frequencyModel dataType="nucleotide">
<frequencies>
<parameter id="W7spiny47OTU.frequencies" value="0.25 0.25 0.25
0.25"/>
</frequencies>
</frequencyModel>
</frequencies>
<kappa>
<parameter id="W7spiny47OTU.kappa" value="2.0" lower="0.0"/>
</kappa>
</HKYModel>

<!-- site
model -->
<siteModel id="W7spiny47OTU.siteModel">
<substitutionModel>
<HKYModel idref="W7spiny47OTU.hky"/>
</substitutionModel>
<gammaShape gammaCategories="8">
<parameter id="W7spiny47OTU.alpha" value="0.5" lower="0.0"/>
</gammaShape>
</siteModel>

<!-- Likelihood for tree given sequence
data -->
<treeLikelihood id="W12spiny47OTU.W12spiny47OTU.treeLikelihood"
useAmbiguities="false">
<patterns idref="W12spiny47OTU.patterns"/>
<treeModel idref="treeModel"/>
<siteModel idref="W12spiny47OTU.siteModel"/>
<discretizedBranchRates idref="W12spiny47OTU.branchRates"/>
</treeLikelihood>

<!-- Likelihood for tree given sequence
data -->
<treeLikelihood id="W16spiny47OTU.W16spiny47OTU.treeLikelihood"
useAmbiguities="false">
<patterns idref="W16spiny47OTU.patterns"/>
<treeModel idref="treeModel"/>
<siteModel idref="W16spiny47OTU.siteModel"/>
<discretizedBranchRates idref="W16spiny47OTU.branchRates"/>
</treeLikelihood>

<!-- Likelihood for tree given sequence
data -->
<treeLikelihood id="W19spiny47OTU.W19spiny47OTU.treeLikelihood"
useAmbiguities="false">
<patterns idref="W19spiny47OTU.patterns"/>
<treeModel idref="treeModel"/>
<siteModel idref="W19spiny47OTU.siteModel"/>
<discretizedBranchRates idref="W19spiny47OTU.branchRates"/>
</treeLikelihood>

<!-- Likelihood for tree given sequence
data -->
<treeLikelihood id="W21spiny47OTU.W21spiny47OTU.treeLikelihood"
useAmbiguities="false">
<patterns idref="W21spiny47OTU.patterns"/>
<treeModel idref="treeModel"/>
<siteModel idref="W21spiny47OTU.siteModel"/>
<discretizedBranchRates idref="W21spiny47OTU.branchRates"/>
</treeLikelihood>

<!-- Likelihood for tree given sequence
data -->
<treeLikelihood id="W6spiny47OTU.W6spiny47OTU.treeLikelihood"
useAmbiguities="false">
<patterns idref="W6spiny47OTU.patterns"/>
<treeModel idref="treeModel"/>
<siteModel idref="W6spiny47OTU.siteModel"/>
<discretizedBranchRates idref="W6spiny47OTU.branchRates"/>
</treeLikelihood>

<!-- Likelihood for tree given sequence
data -->
<treeLikelihood id="W7spiny47OTU.W7spiny47OTU.treeLikelihood"
useAmbiguities="false">
<patterns idref="W7spiny47OTU.patterns"/>
<treeModel idref="treeModel"/>
<siteModel idref="W7spiny47OTU.siteModel"/>
<discretizedBranchRates idref="W7spiny47OTU.branchRates"/>
</treeLikelihood>

<!-- Species definition: binds taxa, species and gene
trees -->
<species id="species">
<sp id="Acrocomia_aculeata">
<taxon idref="Acrocomia_aculeata_PL75"/>
<taxon idref="Acrocomia_aculeata_PL76"/>
<taxon idref="Acrocomia_aculeata_PL77"/>
</sp>
<sp id="Acrocomia_crispa">
<taxon idref="Acrocomia_crispa_PL116"/>
</sp>
<sp id="Acrocomia_intumescens">
<taxon idref="Acrocomia_intumescens_PL78"/>
</sp>
<sp id="Aiphanes_horrida">
<taxon idref="Aiphanes_horrida_PL112"/>
</sp>
<sp id="Aiphanes_minima">
<taxon idref="Aiphanes_minima_PL111"/>
</sp>
<sp id="Aiphanes_ulei">
<taxon idref="Aiphanes_ulei_PL107"/>
</sp>
<sp id="Astrocaryum_alatum">
<taxon idref="Astrocaryum_alatum_PL102"/>
<taxon idref="Astrocaryum_alatum_PL95"/>
</sp>
<sp id="Astrocaryum_mexicanum">
<taxon idref="Astrocaryum_mexicanum_PL104"/>
<taxon idref="Astrocaryum_mexicanum_PL85"/>
<taxon idref="Astrocaryum_mexicanum_PL86"/>
</sp>
<sp id="Astrocaryum_murumuru">
<taxon idref="Astrocaryum_murumuru_PL108"/>
<taxon idref="Astrocaryum_murumuru_PL94"/>
</sp>
<sp id="Astrocaryum_sp">
<taxon idref="Astrocaryum_sp_PL96"/>
<taxon idref="Astrocaryum_sp_PL97"/>
</sp>
<sp id="Astrocaryum_standleyanum">
<taxon idref="Astrocaryum_standleyanum_PL101"/>
<taxon idref="Astrocaryum_standleyanum_PL117"/>
</sp>
<sp id="Attalea_crassispatha">
<taxon idref="Attalea_crassispatha_PL21"/>
</sp>
<sp id="Bactris_brongniartii">
<taxon idref="Bactris_brongniartii_PL83"/>
</sp>
<sp id="Bactris_cf_maraja">
<taxon idref="Bactris_cf_maraja_PL113"/>
</sp>
<sp id="Bactris_coloniata">
<taxon idref="Bactris_coloniata_PL98"/>
</sp>
<sp id="Bactris_concinna">
<taxon idref="Bactris_concinna_PL106"/>
</sp>
<sp id="Bactris_gasipaes">
<taxon idref="Bactris_gasipaes_PL92"/>
<taxon idref="Bactris_gasipaes_PL93"/>
</sp>
<sp id="Bactris_major">
<taxon idref="Bactris_major_PL114"/>
</sp>
<sp id="Bactris_mexicana">
<taxon idref="Bactris_mexicana_PL88"/>
</sp>
<sp id="Bactris_militaris">
<taxon idref="Bactris_militaris_PL109"/>
</sp>
<sp id="Bactris_plumeriana">
<taxon idref="Bactris_plumeriana_PL99"/>
</sp>
<sp id="Bactris_sp">
<taxon idref="Bactris_sp_PL80"/>
</sp>
<sp id="Barcella_odora">
<taxon idref="Barcella_odora_PL121"/>
</sp>
<sp id="Beccariophoenix_madagascariensis">
<taxon idref="Beccariophoenix_madagascariensis_PL47"/>
</sp>
<sp id="Cocos">
<taxon idref="Cocos_nucifera"/>
</sp>
<sp id="Desmoncus_orthacanthos">
<taxon idref="Desmoncus_orthacanthos_PL100"/>
</sp>
<sp id="Desmoncus_polyacanthos">
<taxon idref="Desmoncus_polyacanthos_PL90"/>
</sp>
<sp id="Desmoncus_polyacanthos_var_prunifer">
<taxon idref="Desmoncus_polyacanthos_var_prunifer_PL115"/>
</sp>
<sp id="Elaeis_guineensis">
<taxon idref="Elaeis_guineensis_PL124"/>
</sp>
<sp id="Elaeis_oleifera">
<taxon idref="Elaeis_oleifera_PL110"/>
<taxon idref="Elaeis_oleifera_PL87"/>
</sp>
<sp id="Jubaea_chilensis">
<taxon idref="Jubaea_chilensis_PL62"/>
</sp>
<sp id="Parajubaea_torallyi">
<taxon idref="Parajubaea_torallyi_PL64"/>
</sp>
<sp id="Reinhardtia_gracilis_var_rostrata">
<taxon idref="Reinhardtia_gracilis_var_rostrata_PL119"/>
</sp>
<sp id="Reinhardtia_latisecta">
<taxon idref="Reinhardtia_latisecta_PL120"/>
</sp>
<sp id="Roystonea_borinquena">
<taxon idref="Roystonea_borinquena_PL122"/>
</sp>
<sp id="Roystonea_oleracea">
<taxon idref="Roystonea_oleracea_PL123"/>
</sp>
<sp id="Syagrus_romanzoffiana">
<taxon idref="Syagrus_romanzoffiana_PL27"/>
</sp>

<!-- Collection of Gene
Trees -->
<geneTrees id="geneTrees">
<treeModel idref="treeModel"/>
</geneTrees>
</species>

<!-- full species set for species tree root
height -->
<taxa id="allSpecies">
<sp idref="Acrocomia_aculeata"/>
<sp idref="Acrocomia_crispa"/>
<sp idref="Acrocomia_intumescens"/>
<sp idref="Aiphanes_horrida"/>
<sp idref="Aiphanes_minima"/>
<sp idref="Aiphanes_ulei"/>
<sp idref="Astrocaryum_alatum"/>
<sp idref="Astrocaryum_mexicanum"/>
<sp idref="Astrocaryum_murumuru"/>
<sp idref="Astrocaryum_sp"/>
<sp idref="Astrocaryum_standleyanum"/>
<sp idref="Attalea_crassispatha"/>
<sp idref="Bactris_brongniartii"/>
<sp idref="Bactris_cf_maraja"/>
<sp idref="Bactris_coloniata"/>
<sp idref="Bactris_concinna"/>
<sp idref="Bactris_gasipaes"/>
<sp idref="Bactris_major"/>
<sp idref="Bactris_mexicana"/>
<sp idref="Bactris_militaris"/>
<sp idref="Bactris_plumeriana"/>
<sp idref="Bactris_sp"/>
<sp idref="Barcella_odora"/>
<sp idref="Beccariophoenix_madagascariensis"/>
<sp idref="Cocos"/>
<sp idref="Desmoncus_orthacanthos"/>
<sp idref="Desmoncus_polyacanthos"/>
<sp idref="Desmoncus_polyacanthos_var_prunifer"/>
<sp idref="Elaeis_guineensis"/>
<sp idref="Elaeis_oleifera"/>
<sp idref="Jubaea_chilensis"/>
<sp idref="Parajubaea_torallyi"/>
<sp idref="Reinhardtia_gracilis_var_rostrata"/>
<sp idref="Reinhardtia_latisecta"/>
<sp idref="Roystonea_borinquena"/>
<sp idref="Roystonea_oleracea"/>
<sp idref="Syagrus_romanzoffiana"/>
</taxa>

<!-- Species Tree: Provides Per branch demographic
function -->
<speciesTree id="sptree" constantRoot="true">
<species idref="species"/>
<sppSplitPopulations value="0.041">
<parameter id="speciesTree.splitPopSize"/>
</sppSplitPopulations>
</speciesTree>

<!-- Species tree prior: Yule
Model -->
<yuleModel id="yule" units="substitutions">
<birthRate>
<parameter id="species.yule.birthRate" value="1.0" lower="0.0"/>
</birthRate>
</yuleModel>

<!-- Species Tree Likelihood: Yule
Model -->
<speciationLikelihood id="speciation.likelihood">
<model>
<yuleModel idref="yule"/>
</model>
<speciesTree>
<speciesTree idref="sptree"/>
</speciesTree>
</speciationLikelihood>

<!-- Species Tree:
tmrcaStatistic -->
<tmrcaStatistic id="speciesTree.rootHeight"
name="speciesTree.rootHeight">
<speciesTree idref="sptree"/>
<mrca>
<taxa idref="allSpecies"/>
</mrca>
</tmrcaStatistic>

<!-- Species Tree: Coalescent likelihood for gene trees under species
tree -->
<speciesCoalescent id="species.coalescent">
<species idref="species"/>
<speciesTree idref="sptree"/>
</speciesCoalescent>

<!-- Species tree prior: gama2 +
gamma4 -->
<mixedDistributionLikelihood id="species.popSizesLikelihood">
<distribution0>
<gammaDistributionModel>
<shape>
2
</shape>
<scale>
<parameter id="species.popMean" value="1.0" lower="0.0"/>
</scale>
</gammaDistributionModel>
</distribution0>
<distribution1>
<gammaDistributionModel>
<shape>
4
</shape>
<scale>
<parameter idref="species.popMean"/>
</scale>
</gammaDistributionModel>
</distribution1>
<data>
<parameter idref="speciesTree.splitPopSize"/>
</data>
<indicators>
<parameter value="1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0 0 0 0 0 0"/>
</indicators>
</mixedDistributionLikelihood>

<!-- Define
operators -->
<operators id="operators">
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W12spiny47OTU.kappa"/>
</scaleOperator>
<deltaExchange delta="0.01" weight="0.1">
<parameter idref="W12spiny47OTU.frequencies"/>
</deltaExchange>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W12spiny47OTU.alpha"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W16spiny47OTU.kappa"/>
</scaleOperator>
<deltaExchange delta="0.01" weight="0.1">
<parameter idref="W16spiny47OTU.frequencies"/>
</deltaExchange>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W16spiny47OTU.alpha"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W19spiny47OTU.kappa"/>
</scaleOperator>
<deltaExchange delta="0.01" weight="0.1">
<parameter idref="W19spiny47OTU.frequencies"/>
</deltaExchange>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W19spiny47OTU.alpha"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W21spiny47OTU.kappa"/>
</scaleOperator>
<deltaExchange delta="0.01" weight="0.1">
<parameter idref="W21spiny47OTU.frequencies"/>
</deltaExchange>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W21spiny47OTU.alpha"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W6spiny47OTU.kappa"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W7spiny47OTU.kappa"/>
</scaleOperator>
<deltaExchange delta="0.01" weight="0.1">
<parameter idref="W7spiny47OTU.frequencies"/>
</deltaExchange>
<scaleOperator scaleFactor="0.75" weight="0.1">
<parameter idref="W7spiny47OTU.alpha"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W12spiny47OTU.ucld.stdev"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W16spiny47OTU.ucld.mean"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W16spiny47OTU.ucld.stdev"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W19spiny47OTU.ucld.mean"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W19spiny47OTU.ucld.stdev"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W21spiny47OTU.ucld.mean"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W21spiny47OTU.ucld.stdev"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W6spiny47OTU.ucld.mean"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W6spiny47OTU.ucld.stdev"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W7spiny47OTU.ucld.mean"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="W7spiny47OTU.ucld.stdev"/>
</scaleOperator>
<upDownOperator scaleFactor="0.75" weight="30">
<up>
<parameter idref="W16spiny47OTU.ucld.mean"/>
<parameter idref="W19spiny47OTU.ucld.mean"/>
<parameter idref="W21spiny47OTU.ucld.mean"/>
<parameter idref="W6spiny47OTU.ucld.mean"/>
<parameter idref="W7spiny47OTU.ucld.mean"/>
<parameter idref="species.yule.birthRate"/>
</up>
<down>
<speciesTree idref="sptree"/>
<parameter idref="species.popMean"/>
<parameter idref="speciesTree.splitPopSize"/>
<parameter idref="treeModel.allInternalNodeHeights"/>
</down>
</upDownOperator>
<subtreeSlide size="0.0041" gaussian="true" weight="15">
<treeModel idref="treeModel"/>
</subtreeSlide>
<narrowExchange weight="15">
<treeModel idref="treeModel"/>
</narrowExchange>
<wideExchange weight="3">
<treeModel idref="treeModel"/>
</wideExchange>
<wilsonBalding weight="3">
<treeModel idref="treeModel"/>
</wilsonBalding>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="treeModel.rootHeight"/>
</scaleOperator>
<uniformOperator weight="30">
<parameter idref="treeModel.internalNodeHeights"/>
</uniformOperator>
<upDownOperator scaleFactor="0.75" weight="3">
<up>
</up>
<down>
<parameter idref="treeModel.allInternalNodeHeights"/>
</down>
</upDownOperator>
<swapOperator size="1" weight="10" autoOptimize="false">
<parameter idref="W12spiny47OTU.branchRates.categories"/>
</swapOperator>
<uniformIntegerOperator weight="10">
<parameter idref="W12spiny47OTU.branchRates.categories"/>
</uniformIntegerOperator>
<upDownOperator scaleFactor="0.75" weight="3">
<up>
<parameter idref="W16spiny47OTU.ucld.mean"/>
</up>
<down>
<parameter idref="treeModel.allInternalNodeHeights"/>
</down>
</upDownOperator>
<swapOperator size="1" weight="10" autoOptimize="false">
<parameter idref="W16spiny47OTU.branchRates.categories"/>
</swapOperator>
<uniformIntegerOperator weight="10">
<parameter idref="W16spiny47OTU.branchRates.categories"/>
</uniformIntegerOperator>
<upDownOperator scaleFactor="0.75" weight="3">
<up>
<parameter idref="W19spiny47OTU.ucld.mean"/>
</up>
<down>
<parameter idref="treeModel.allInternalNodeHeights"/>
</down>
</upDownOperator>
<swapOperator size="1" weight="10" autoOptimize="false">
<parameter idref="W19spiny47OTU.branchRates.categories"/>
</swapOperator>
<uniformIntegerOperator weight="10">
<parameter idref="W19spiny47OTU.branchRates.categories"/>
</uniformIntegerOperator>
<upDownOperator scaleFactor="0.75" weight="3">
<up>
<parameter idref="W21spiny47OTU.ucld.mean"/>
</up>
<down>
<parameter idref="treeModel.allInternalNodeHeights"/>
</down>
</upDownOperator>
<swapOperator size="1" weight="10" autoOptimize="false">
<parameter idref="W21spiny47OTU.branchRates.categories"/>
</swapOperator>
<uniformIntegerOperator weight="10">
<parameter idref="W21spiny47OTU.branchRates.categories"/>
</uniformIntegerOperator>
<upDownOperator scaleFactor="0.75" weight="3">
<up>
<parameter idref="W6spiny47OTU.ucld.mean"/>
</up>
<down>
<parameter idref="treeModel.allInternalNodeHeights"/>
</down>
</upDownOperator>
<swapOperator size="1" weight="10" autoOptimize="false">
<parameter idref="W6spiny47OTU.branchRates.categories"/>
</swapOperator>
<uniformIntegerOperator weight="10">
<parameter idref="W6spiny47OTU.branchRates.categories"/>
</uniformIntegerOperator>
<upDownOperator scaleFactor="0.75" weight="3">
<up>
<parameter idref="W7spiny47OTU.ucld.mean"/>
</up>
<down>
<parameter idref="treeModel.allInternalNodeHeights"/>
</down>
</upDownOperator>
<swapOperator size="1" weight="10" autoOptimize="false">
<parameter idref="W7spiny47OTU.branchRates.categories"/>
</swapOperator>
<uniformIntegerOperator weight="10">
<parameter idref="W7spiny47OTU.branchRates.categories"/>
</uniformIntegerOperator>
<scaleOperator scaleFactor="0.9" weight="5">
<parameter idref="species.popMean"/>
</scaleOperator>
<scaleOperator scaleFactor="0.75" weight="3">
<parameter idref="species.yule.birthRate"/>
</scaleOperator>
<scaleOperator scaleFactor="0.5" weight="94">
<parameter idref="speciesTree.splitPopSize"/>
</scaleOperator>
<nodeReHeight weight="94">
<species idref="species"/>
<speciesTree idref="sptree"/>
</nodeReHeight>
</operators>

<!-- Define
MCMC -->
<mcmc id="mcmc" chainLength="10000000" autoOptimize="true"
operatorAnalysis="StarBEASTLog.ops.txt">
<posterior id="posterior">
<prior id="prior">
<speciesCoalescent idref="species.coalescent"/>
<mixedDistributionLikelihood idref="species.popSizesLikelihood"/>
<speciationLikelihood idref="speciation.likelihood"/>
<logNormalPrior mean="1.0" stdev="1.25" offset="0.0"
meanInRealSpace="false">
<parameter idref="W12spiny47OTU.kappa"/>
</logNormalPrior>
<uniformPrior lower="0.0" upper="1.0">
<parameter idref="W12spiny47OTU.frequencies"/>
</uniformPrior>
<exponentialPrior mean="0.5" offset="0.0">
<parameter idref="W12spiny47OTU.alpha"/>
</exponentialPrior>
<logNormalPrior mean="1.0" stdev="1.25" offset="0.0"
meanInRealSpace="false">
<parameter idref="W16spiny47OTU.kappa"/>
</logNormalPrior>
<uniformPrior lower="0.0" upper="1.0">
<parameter idref="W16spiny47OTU.frequencies"/>
</uniformPrior>
<exponentialPrior mean="0.5" offset="0.0">
<parameter idref="W16spiny47OTU.alpha"/>
</exponentialPrior>
<logNormalPrior mean="1.0" stdev="1.25" offset="0.0"
meanInRealSpace="false">
<parameter idref="W19spiny47OTU.kappa"/>
</logNormalPrior>
<uniformPrior lower="0.0" upper="1.0">
<parameter idref="W19spiny47OTU.frequencies"/>
</uniformPrior>
<exponentialPrior mean="0.5" offset="0.0">
<parameter idref="W19spiny47OTU.alpha"/>
</exponentialPrior>
<logNormalPrior mean="1.0" stdev="1.25" offset="0.0"
meanInRealSpace="false">
<parameter idref="W21spiny47OTU.kappa"/>
</logNormalPrior>
<uniformPrior lower="0.0" upper="1.0">
<parameter idref="W21spiny47OTU.frequencies"/>
</uniformPrior>
<exponentialPrior mean="0.5" offset="0.0">
<parameter idref="W21spiny47OTU.alpha"/>
</exponentialPrior>
<logNormalPrior mean="1.0" stdev="1.25" offset="0.0"
meanInRealSpace="false">
<parameter idref="W6spiny47OTU.kappa"/>
</logNormalPrior>
<logNormalPrior mean="1.0" stdev="1.25" offset="0.0"
meanInRealSpace="false">
<parameter idref="W7spiny47OTU.kappa"/>
</logNormalPrior>
<uniformPrior lower="0.0" upper="1.0">
<parameter idref="W7spiny47OTU.frequencies"/>
</uniformPrior>
<exponentialPrior mean="0.5" offset="0.0">
<parameter idref="W7spiny47OTU.alpha"/>
</exponentialPrior>
<exponentialPrior mean="0.3333333333333333" offset="0.0">
<parameter idref="W12spiny47OTU.ucld.stdev"/>
</exponentialPrior>
<exponentialPrior mean="0.3333333333333333" offset="0.0">
<parameter idref="W16spiny47OTU.ucld.stdev"/>
</exponentialPrior>
<logNormalPrior mean="0.0" stdev="1.0" offset="0.0"
meanInRealSpace="false">
<parameter idref="W16spiny47OTU.ucld.mean"/>
</logNormalPrior>
<exponentialPrior mean="0.3333333333333333" offset="0.0">
<parameter idref="W19spiny47OTU.ucld.stdev"/>
</exponentialPrior>
<logNormalPrior mean="0.0" stdev="1.0" offset="0.0"
meanInRealSpace="false">
<parameter idref="W19spiny47OTU.ucld.mean"/>
</logNormalPrior>
<exponentialPrior mean="0.3333333333333333" offset="0.0">
<parameter idref="W21spiny47OTU.ucld.stdev"/>
</exponentialPrior>
<logNormalPrior mean="0.0" stdev="1.0" offset="0.0"
meanInRealSpace="false">
<parameter idref="W21spiny47OTU.ucld.mean"/>
</logNormalPrior>
<exponentialPrior mean="0.3333333333333333" offset="0.0">
<parameter idref="W6spiny47OTU.ucld.stdev"/>
</exponentialPrior>
<logNormalPrior mean="0.0" stdev="1.0" offset="0.0"
meanInRealSpace="false">
<parameter idref="W6spiny47OTU.ucld.mean"/>
</logNormalPrior>
<exponentialPrior mean="0.3333333333333333" offset="0.0">
<parameter idref="W7spiny47OTU.ucld.stdev"/>
</exponentialPrior>
<logNormalPrior mean="0.0" stdev="1.0" offset="0.0"
meanInRealSpace="false">
<parameter idref="W7spiny47OTU.ucld.mean"/>
</logNormalPrior>
<oneOnXPrior>
<parameter idref="species.popMean"/>
</oneOnXPrior>
<oneOnXPrior>
<parameter idref="species.yule.birthRate"/>
</oneOnXPrior>
</prior>
<likelihood id="likelihood">
<treeLikelihood idref="W12spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W16spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W19spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W21spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W6spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W7spiny47OTU.treeLikelihood"/>
</likelihood>
</posterior>
<operators idref="operators"/>

<!-- write log to
screen -->
<log id="screenLog" logEvery="1000">
<column label="Posterior" dp="4" width="12">
<posterior idref="posterior"/>
</column>
<column label="Prior" dp="4" width="12">
<prior idref="prior"/>
</column>
<column label="Likelihood" dp="4" width="12">
<likelihood idref="likelihood"/>
</column>
<column label="PopMean" dp="4" width="12">
<parameter idref="species.popMean"/>
</column>
<column label="rootHeight" sf="6" width="12">
<parameter idref="treeModel.rootHeight"/>
</column>
<column label="W12spiny47OTU.ucld.mean" sf="6" width="12">
<parameter idref="W12spiny47OTU.ucld.mean"/>
</column>
<column label="W16spiny47OTU.ucld.mean" sf="6" width="12">
<parameter idref="W16spiny47OTU.ucld.mean"/>
</column>
<column label="W19spiny47OTU.ucld.mean" sf="6" width="12">
<parameter idref="W19spiny47OTU.ucld.mean"/>
</column>
<column label="W21spiny47OTU.ucld.mean" sf="6" width="12">
<parameter idref="W21spiny47OTU.ucld.mean"/>
</column>
<column label="W6spiny47OTU.ucld.mean" sf="6" width="12">
<parameter idref="W6spiny47OTU.ucld.mean"/>
</column>
<column label="W7spiny47OTU.ucld.mean" sf="6" width="12">
<parameter idref="W7spiny47OTU.ucld.mean"/>
</column>
</log>

<!-- write log to
file -->
<log id="fileLog" logEvery="1000" fileName="StarBEASTLog.log.txt"
overwrite="false">
<posterior idref="posterior"/>
<prior idref="prior"/>
<likelihood idref="likelihood"/>
<speciesCoalescent idref="species.coalescent"/>
<mixedDistributionLikelihood idref="species.popSizesLikelihood"/>
<speciationLikelihood idref="speciation.likelihood"/>
<parameter idref="species.popMean"/>
<parameter idref="speciesTree.splitPopSize"/>
<parameter idref="species.yule.birthRate"/>
<tmrcaStatistic idref="speciesTree.rootHeight"/>
<parameter idref="treeModel.rootHeight"/>
<parameter idref="W12spiny47OTU.kappa"/>
<parameter idref="W12spiny47OTU.frequencies"/>
<parameter idref="W12spiny47OTU.alpha"/>
<parameter idref="W16spiny47OTU.kappa"/>
<parameter idref="W16spiny47OTU.frequencies"/>
<parameter idref="W16spiny47OTU.alpha"/>
<parameter idref="W19spiny47OTU.kappa"/>
<parameter idref="W19spiny47OTU.frequencies"/>
<parameter idref="W19spiny47OTU.alpha"/>
<parameter idref="W21spiny47OTU.kappa"/>
<parameter idref="W21spiny47OTU.frequencies"/>
<parameter idref="W21spiny47OTU.alpha"/>
<parameter idref="W6spiny47OTU.kappa"/>
<parameter idref="W7spiny47OTU.kappa"/>
<parameter idref="W7spiny47OTU.frequencies"/>
<parameter idref="W7spiny47OTU.alpha"/>
<parameter idref="W12spiny47OTU.ucld.mean"/>
<parameter idref="W12spiny47OTU.ucld.stdev"/>
<parameter idref="W16spiny47OTU.ucld.mean"/>
<parameter idref="W16spiny47OTU.ucld.stdev"/>
<parameter idref="W19spiny47OTU.ucld.mean"/>
<parameter idref="W19spiny47OTU.ucld.stdev"/>
<parameter idref="W21spiny47OTU.ucld.mean"/>
<parameter idref="W21spiny47OTU.ucld.stdev"/>
<parameter idref="W6spiny47OTU.ucld.mean"/>
<parameter idref="W6spiny47OTU.ucld.stdev"/>
<parameter idref="W7spiny47OTU.ucld.mean"/>
<parameter idref="W7spiny47OTU.ucld.stdev"/>
<rateStatistic idref="W12spiny47OTU.meanRate"/>
<rateStatistic idref="W12spiny47OTU.coefficientOfVariation"/>
<rateCovarianceStatistic idref="W12spiny47OTU.covariance"/>
<rateStatistic idref="W16spiny47OTU.meanRate"/>
<rateStatistic idref="W16spiny47OTU.coefficientOfVariation"/>
<rateCovarianceStatistic idref="W16spiny47OTU.covariance"/>
<rateStatistic idref="W19spiny47OTU.meanRate"/>
<rateStatistic idref="W19spiny47OTU.coefficientOfVariation"/>
<rateCovarianceStatistic idref="W19spiny47OTU.covariance"/>
<rateStatistic idref="W21spiny47OTU.meanRate"/>
<rateStatistic idref="W21spiny47OTU.coefficientOfVariation"/>
<rateCovarianceStatistic idref="W21spiny47OTU.covariance"/>
<rateStatistic idref="W6spiny47OTU.meanRate"/>
<rateStatistic idref="W6spiny47OTU.coefficientOfVariation"/>
<rateCovarianceStatistic idref="W6spiny47OTU.covariance"/>
<rateStatistic idref="W7spiny47OTU.meanRate"/>
<rateStatistic idref="W7spiny47OTU.coefficientOfVariation"/>
<rateCovarianceStatistic idref="W7spiny47OTU.covariance"/>
<treeLikelihood idref="W12spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W16spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W19spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W21spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W6spiny47OTU.treeLikelihood"/>
<treeLikelihood idref="W7spiny47OTU.treeLikelihood"/>
</log>

<!-- write tree log to
file -->
<logTree id="species.treeFileLog" logEvery="1000" nexusFormat="true"
fileName="StarBEASTLog.species.trees" sortTranslationTable="true">
<speciesTree idref="sptree"/>
<posterior idref="posterior"/>
</logTree>
<logTree id="treeFileLog" logEvery="1000" nexusFormat="true"
fileName="StarBEASTLog.trees.txt" sortTranslationTable="true">
<treeModel idref="treeModel"/>
<discretizedBranchRates idref="W12spiny47OTU.branchRates"/>
<discretizedBranchRates idref="W16spiny47OTU.branchRates"/>
<discretizedBranchRates idref="W19spiny47OTU.branchRates"/>
<discretizedBranchRates idref="W21spiny47OTU.branchRates"/>
<discretizedBranchRates idref="W6spiny47OTU.branchRates"/>
<discretizedBranchRates idref="W7spiny47OTU.branchRates"/>
<posterior idref="posterior"/>
</logTree>
</mcmc>
<report>
<property name="timer">
<mcmc idref="mcmc"/>
</property>
</report>
</beast>

[Graham]

From a quick look at the XML, it seems you have a single treeModel for
all 6 loci, whereas there should be one per gene. The gene tree
topologies should be allowed to be different. Graham

[griffinia]

Graham,

When I tried that at first, assigning a different gene tree to each
partition, I got the error message to the effect that "the starting
tree has already been identified," as BEAUTi created six start tree
IDs." However the docs for *BEAST say that only a single tree can be
loaded as starting tree for use across all partitions, unless I am
reading them wrong.

Alan.

[Pip Griffin]

Hi,

I am getting this error message too.

i.e.

Parsing error - poorly formed BEAST file, 2cp_7nuc_simplermodels_2.xml:
Object with idref=waxy B seqandgaps multiinput.treeLikelihood has not
been previously declared.

I have separate trees (and therefore separate TreeModels) for all
partitions (except the two chloroplast loci, which share a tree; but
the supposedly problematic locus is not a chloroplast locus anyway,
it's just the first partition in the list).

As far as I can tell from the xml file all the tree information is in there...

can anybody help?

thanks
Pip

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[griffinia]

I am starting to wonder if this is a bug in either BEAST or BEAUTI
1.71. let's hope one of the developers chimes in soon. In the
meantime, I am going to try and recompile the file in BEAUTi 1.6.

[Christopher Blair]

I have noticed that if you open the xml file and search treeLikelihood you will notice that the names are duplicated at the beginning. My files work if I delete the redundant names.

--
Christopher Blair, Ph.D. Candidate
Department of Ecology and Evolutionary Biology
University of Toronto and
Department of Natural History
Royal Ontario Museum
100 Queen's Park
Toronto, ON M5S 2C6
Canada
(416) 586-8094 (office)
http://individual.utoronto.ca/chrisblair/index.html

[Pip Griffin]

Yes! Thanks so much Christopher. Fixed!

Philippa

[griffinia]

Thanks Chris. I will try that immediately.

Alan