Number of patterns for CIPRES BEAST runs

[Manpreet Kohli]

Hello All, 

I just realized that for some of my BEAST runs, I approximated number of patterns to 1700, where I meant to set it to 17000. Now I am not sure how is this underestimation of the number of patterns going to affect my output?

Thank you so much 

[Pedro Paulo Goulart Taucce]

Dear Manpreet,

It does not affect the output and it is only for CIPRES to decide the amount of computational resources it will release for your run. Maybe your analysis ran a bit slower but that's all.

Best,

Pedro

Dr. Pedro P. G. Taucce

www.pedrotaucce.org

Curriculum Lattes

Universidade Estadual Paulista "Júlio de Mesquita Filho" - UNESP

Instituto de Biociências

Departamento de Zoologia, Jacarezário

Av. 24 A, 1515, Bairro Bela Vista

Rio Claro - SP

CEP 13506-900

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[Kohli, Manpreet]

Hello Pedro, 

Thank you so much for your reply. That is what I understood from the instructions on CIPRES but wasn't really sure. 

Thanks again. 

Manpreet Kohli

PhD candidate

Federated Department of Biology

Rutgers University and NJIT

Newark, NJ, USA - 07102

Ph # : 1- 973-353-5370

On Tue, Jun 19, 2018 at 8:04 PM, Pedro Paulo Goulart Taucce <pedro...@gmail.com> wrote:

Dear Manpreet,

It does not affect the output and it is only for CIPRES to decide the amount of computational resources it will release for your run. Maybe your analysis ran a bit slower but that's all.

Best,

Pedro

Dr. Pedro P. G. Taucce

www.pedrotaucce.org

Curriculum Lattes

Universidade Estadual Paulista "Júlio de Mesquita Filho" - UNESP

Instituto de Biociências

Departamento de Zoologia, Jacarezário

Av. 24 A, 1515, Bairro Bela Vista

Rio Claro - SP

CEP 13506-900

Em ter, 19 de jun de 2018 às 20:58, Manpreet Kohli <mk...@njit.edu> escreveu:

Hello All, 

I just realized that for some of my BEAST runs, I approximated number of patterns to 1700, where I meant to set it to 17000. Now I am not sure how is this underestimation of the number of patterns going to affect my output?

Thank you so much 

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