Error running BEAST and BEAGLE

[Lindy Lau]

Hello,

I am trying to run BEAST on a 64bit macOS 10.15.5 but I have been getting this error code:

INFO:   BEAGLE function, create, returned error code -6 (No resource matches requirements)

Fatal exception: No acceptable BEAGLE library plugins found. Make sure that BEAGLE is properly installed or try changing resource requirements.

java.lang.RuntimeException: No acceptable BEAGLE library plugins found. Make sure that BEAGLE is properly installed or try changing resource requirements.

at beagle.BeagleFactory.loadBeagleInstance(Unknown Source)

at dr.evomodel.treelikelihood.BeagleTreeLikelihood.<init>(Unknown Source)

at dr.evomodelxml.treelikelihood.BeagleTreeLikelihoodParser.createTreeLikelihood(Unknown Source)

at dr.evomodelxml.treelikelihood.BeagleTreeLikelihoodParser.parseXMLObject(Unknown Source)

at dr.xml.AbstractXMLObjectParser.parseXMLObject(Unknown Source)

at dr.xml.XMLParser.convert(Unknown Source)

at dr.xml.XMLParser.convert(Unknown Source)

at dr.xml.XMLParser.parse(Unknown Source)

at dr.app.beast.BeastMain.<init>(Unknown Sou

BEAST has terminated with an error. Please select QUIT from the menu.

rce)

at dr.app.beast.BeastMain.main(Unknown Source)

I have tried to reinstall all the applications, including BEAGLE. I have used the binary installer as listed in this page (https://github.com/beagle-dev/beagle-lib/wiki/MacInstallInstructions) and also tried to install from source. I am also using Oracle JAVA and have also downloaded NVIDIA GPU. The problem still persists. 

[Farman, Mark L.]

Same problem here. 

Mark L. Farman 
Professor, Department of Plant Pathology

225 Plant Science Building
1405 Veteran's Dr.
University of Kentucky
Lexington, KY 40546 USA 
tel:  (859) 218-0728 
fax:  (859) 323-1961

Sent from my iPhone

On Aug 16, 2020, at 2:37 PM, Lindy Lau <s101...@connect.np.edu.sg> wrote:



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[Kaetakan Sithamparananthan]

Mine too a bit different

[Erandi Sanchez]

Hello,

Could anyone fix this problem?

I have the same problem

Erandi Sanchez

[Brandon Stark]

please just make sure JDK is also installed.

[Chris Park]

Hi, has anyone come up with a solution for this issue? I've come across the same issue; 

INFO:   BEAGLE function, create, returned error code -6 (No resource matches requirements)

Fatal exception: No acceptable BEAGLE library plugins found. Make sure that BEAGLE is properly installed or try changing resource requirements.

java.lang.RuntimeException: No acceptable BEAGLE library plugins found. Make sure that BEAGLE is properly installed or try changing resource requirements.

at beagle.BeagleFactory.loadBeagleInstance(Unknown Source)

at dr.evomodel.treedatalikelihood.BeagleDataLikelihoodDelegate.<init>(Unknown Source)

at dr.evomodelxml.treedatalikelihood.TreeDataLikelihoodParser.createTreeDataLikelihood(Unknown Source)

at dr.evomodelxml.treedatalikelihood.TreeDataLikelihoodParser.parseXMLObject(Unknown Source)

at dr.xml.AbstractXMLObjectParser.parseXMLObject(Unknown Source)

at dr.xml.XMLParser.convert(Unknown Source)

at dr.xml.XMLParser.convert(Unknown Source)

at dr.xml.XMLParser.parse(Unknown Source)

at dr.app.beast.BeastMain

Creating state frequencies model 'frequencies': Using empirical frequencies from data = {0.29851, 0.18313, 0.1965, 0.32187}

Creating site rate model: 

  4 category discrete gamma with initial shape = 0.5

  initial proportion of invariant sites = 0.5

Using BEAGLE DataLikelihood Delegate

.<init>(Unknown Source)

at dr.app.beast.BeastMain.main(Unknown Source)

BEAST has terminated with an error. Please select QUIT from the menu.

likewise, I've tried reinstalling BEAST, Beagle, java, installing from source, downgrading my mac os and still it doesn't work.

2021년 7월 3일 토요일 오전 1시 15분 21초 UTC+9에 Brandon Stark님이 작성:

[Tiago Gräf]

Same problem here. This issue emerged after  I upgraded to macOS Big Sur (11.5.2) ... =/

I've installed it from source and it seemed that every thing went well. Make check didn't spot errors. 

Someone could help us?

Thanks,

Tiago

[Tiago Gräf]

Update:

Could solve the issue by installing beast with conda

conda install -c bioconda/label/cf201901 beast

Best, 

Tiago