How can I include build warnings from header files loaded in Bazel modules?

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I have a mono repository containing source code that is divided into several Bazel modules (bzlmod). When I build the C++ code, bazel exclude build warnings from the modules since it consider that code to be external and is hence using -isystem includes for those header files. However, in my case, for all Bazel modules that are defined within the mono repository, I want build warnings enabled. For modules that are not version controlled within the mono repository, I want build warnings to be excluded.

Is this somehow supported by bazel already?

Example:
mono/MODULE.bazel
mono/BUILD.bazel
mono/.bazelrc  # common --override_module=module_x=%workspace%/module_x
mono/module_x/MODULE.bazel
mono/module_x/BUILD.bazel  # cc_library(name="x", hdrs=[x.hpp"], ...)
mono/module_x/x.hpp
mono/module_x/x.cpp

When building @module_x//:x I want Bazel to include "x.hpp" using -I and NOT -isystem.
However, when building source code from an external module such as @nanopb//..., I want -isystem to be in use.