Regarding Tecplot and hdf5 based visualization problem with latest Basilisk
403 views
Skip to first unread message
Shyam Sunder Yadav
Jan 27, 2023, 10:42:58 AM1/27/23
to basilisk-fr
Dear All
I noticed that the Tecplot based
header file from the sandbox of hiroumi
(http://basilisk.fr/sandbox/hiroumi/tecplot/output.c) does not produce
correct visualization of data with the latest version of Basilisk....
It used to work fine with an older version. I purchased a Tecplot academic license just for using it with Basilisk!
Please check the images below.
Similar is the case with the hdf5 based header from the sandbox of lchirco (http://basilisk.fr/sandbox/lchirco/output_hdf.h)....
Some body please help in this regard. Thank you, Regards.
Old Basilisk output with Tecplot:
New Basilisk Output:
Dr. Shyam Sunder Yadav
Assistant Professor
Mechanical Engineering
BITS Pilani
09902346342
http://www.bits-pilani.ac.in/pilani/ssyadav/Profile
Assistant Professor
Mechanical Engineering
BITS Pilani
09902346342
http://www.bits-pilani.ac.in/pilani/ssyadav/Profile
The information contained in this electronic communication is intended solely for the individual(s) or entity to which it is addressed. It may contain proprietary, confidential and/or legally privileged information. Any review, retransmission, dissemination, printing, copying or other use of, or taking any action in reliance on the contents of this information by person(s) or entities other than the intended recipient is strictly prohibited and may be unlawful. If you have received this communication in error, please notify us by responding to this email or telephone and immediately and permanently delete all copies of this message and any attachments from your system(s). The contents of this message do not necessarily represent the views or policies of BITS Pilani.
Vrionis Yiannis
Jan 27, 2023, 11:13:00 AM1/27/23
to Shyam Sunder Yadav, basilisk-fr
Hello Yadav,
I had faced a similar issue with you in the past. So I think the header you attached is working fine without adaptation or periodic boundaries in the current version of Basilisk. This is due to how Basilisk iterated through different grid levels.
I have experimented a bit and created a header that can work for 2D cases and 2D cases with periodic boundaries. Extending it to 3D is quite a hassle due to the plt format of Tecplot. If you like I can send you the code to try it out.
Please let me know.
Regards,
Yiannis
--
You received this message because you are subscribed to the Google Groups "basilisk-fr" group.
To unsubscribe from this group and stop receiving emails from it, send an email to basilisk-fr...@googlegroups.com.
To view this discussion on the web visit https://groups.google.com/d/msgid/basilisk-fr/CA%2BetC8KbtmmHqJCGOqXguH4UHXk_Aw0dHBsx0gM0c_gqoSB53A%40mail.gmail.com.
vik...@uah.edu
Jan 27, 2023, 4:07:35 PM1/27/23
to basilisk-fr
Dear Colleagues,
We saw similar problems with Tecplot visualization of the vtu files generated with the latest basilisk.
Particularly for periodic BCs. I can share the simplest 2d file to reproduce the problem, which appears even without AMR.
It would be great if somebody shared an updated header file for vtu output.
All the best,
Vladimir
Shyam Sunder Yadav
Jan 27, 2023, 9:54:48 PM1/27/23
to basilisk-fr
Thanks dear Yiannis for the help...
I am investigating this further...
As Vladimir pointed out in another post, the visualization problem is with .vtu format as well...
Regards
Shyam Sunder Yadav
Jul 26, 2024, 2:51:27 AM7/26/24
to basilisk-fr
Dear All
I could not resolve the visualization problem with Tecplot.
In case anyone has resolved this, please let me know.
Thank you. Regards
Wojciech Aniszewski
Jul 26, 2024, 3:53:06 AM7/26/24
to Shyam Sunder Yadav, basilisk-fr
Dump Tecplot for Paraview (it's free), and use output_vtu_foreach.h,
no problem in serial, openmp or mpi. Unless Tecplot can open VTU, don't know.
w
On Thu, Jul 25, 2024 at 11:51:27PM -0700, Shyam Sunder Yadav wrote:
> Dear All
>
> I could not resolve the visualization problem with Tecplot.
>
> In case anyone has resolved this, please let me know.
>
> Thank you. Regards
>
> On Friday, January 27, 2023 at 9:12:58 PM UTC+5:30 Shyam Sunder Yadav wrote:
>
> > Dear All
> >
> > I noticed that the Tecplot based header file from the sandbox of hiroumi (
> > http://basilisk.fr/sandbox/hiroumi/tecplot/output.c) does not produce
> > correct visualization of data with the latest version of Basilisk....
> >
> > It used to work fine with an older version. I purchased a Tecplot academic
> > license just for using it with Basilisk!
> >
> > Please check the images below.
> >
> > Similar is the case with the hdf5 based header from the sandbox of lchirco
> > (http://basilisk.fr/sandbox/lchirco/output_hdf.h)....
> >
> > Some body please help in this regard. Thank you, Regards.
> >
> > *Old Basilisk output with Tecplot:*
> >
> > [image: old_basilisk.png]
> >
> >
> > *New Basilisk Output:*
--
/^..^\
( (••) ) Wojciech (Voitek) ANISZEWSKI
(|)_._(|)~
OrcId : https://orcid.org/0000-0002-4248-1194
Scholar : https://tinyurl.com/y28b8gfp
RG : https://www.researchgate.net/profile/Wojciech_Aniszewski
Mastodon: @w...@fediscience.org
Twitter : @echo_dancers3
GPG ID : AC66485E
no problem in serial, openmp or mpi. Unless Tecplot can open VTU, don't know.
w
On Thu, Jul 25, 2024 at 11:51:27PM -0700, Shyam Sunder Yadav wrote:
> Dear All
>
> I could not resolve the visualization problem with Tecplot.
>
> In case anyone has resolved this, please let me know.
>
> Thank you. Regards
>
> On Friday, January 27, 2023 at 9:12:58 PM UTC+5:30 Shyam Sunder Yadav wrote:
>
> > Dear All
> >
> > I noticed that the Tecplot based header file from the sandbox of hiroumi (
> > http://basilisk.fr/sandbox/hiroumi/tecplot/output.c) does not produce
> > correct visualization of data with the latest version of Basilisk....
> >
> > It used to work fine with an older version. I purchased a Tecplot academic
> > license just for using it with Basilisk!
> >
> > Please check the images below.
> >
> > Similar is the case with the hdf5 based header from the sandbox of lchirco
> > (http://basilisk.fr/sandbox/lchirco/output_hdf.h)....
> >
> > Some body please help in this regard. Thank you, Regards.
> >
> >
> > [image: old_basilisk.png]
> >
> >
> > *New Basilisk Output:*
> >
> > [image: new_basilisk.png]
> >
> > --
> > Dr. Shyam Sunder Yadav
> > Assistant Professor
> > Mechanical Engineering
> > BITS Pilani
> > 09902346342
> > http://www.bits-pilani.ac.in/pilani/ssyadav/Profile
> >
> > The information contained in this electronic communication is intended
> > solely for the individual(s) or entity to which it is addressed. It may
> > contain proprietary, confidential and/or legally privileged information.
> > Any review, retransmission, dissemination, printing, copying or other use
> > of, or taking any action in reliance on the contents of this information by
> > person(s) or entities other than the intended recipient is strictly
> > prohibited and may be unlawful. If you have received this communication in
> > error, please notify us by responding to this email or telephone and
> > immediately and permanently delete all copies of this message and any
> > attachments from your system(s). The contents of this message do not
> > necessarily represent the views or policies of BITS Pilani.
> >
>
> --
> > [image: new_basilisk.png]
> >
> > --
> > Dr. Shyam Sunder Yadav
> > Assistant Professor
> > Mechanical Engineering
> > BITS Pilani
> > 09902346342
> > http://www.bits-pilani.ac.in/pilani/ssyadav/Profile
> >
> > The information contained in this electronic communication is intended
> > solely for the individual(s) or entity to which it is addressed. It may
> > contain proprietary, confidential and/or legally privileged information.
> > Any review, retransmission, dissemination, printing, copying or other use
> > of, or taking any action in reliance on the contents of this information by
> > person(s) or entities other than the intended recipient is strictly
> > prohibited and may be unlawful. If you have received this communication in
> > error, please notify us by responding to this email or telephone and
> > immediately and permanently delete all copies of this message and any
> > attachments from your system(s). The contents of this message do not
> > necessarily represent the views or policies of BITS Pilani.
> >
>
> The information contained in this electronic communication is intended
> solely for the individual(s) or entity to which it is addressed. It may
> contain proprietary, confidential and/or legally privileged information.
> Any review, retransmission, dissemination, printing, copying or other use
> of, or taking any action in reliance on the contents of this information by
> person(s) or entities other than the intended recipient is strictly
> prohibited and may be unlawful. If you have received this communication in
> error, please notify us by responding to this email or telephone and
> immediately and permanently delete all copies of this message and any
> attachments from your system(s). The contents of this message do not
> necessarily represent the views or policies of BITS Pilani.
>
> solely for the individual(s) or entity to which it is addressed. It may
> contain proprietary, confidential and/or legally privileged information.
> Any review, retransmission, dissemination, printing, copying or other use
> of, or taking any action in reliance on the contents of this information by
> person(s) or entities other than the intended recipient is strictly
> prohibited and may be unlawful. If you have received this communication in
> error, please notify us by responding to this email or telephone and
> immediately and permanently delete all copies of this message and any
> attachments from your system(s). The contents of this message do not
> necessarily represent the views or policies of BITS Pilani.
>
> --
> You received this message because you are subscribed to the Google Groups "basilisk-fr" group.
> To unsubscribe from this group and stop receiving emails from it, send an email to basilisk-fr...@googlegroups.com.
> To view this discussion on the web visit https://groups.google.com/d/msgid/basilisk-fr/c678042c-97e7-4bb9-b034-5718107553d5n%40googlegroups.com.
> You received this message because you are subscribed to the Google Groups "basilisk-fr" group.
> To unsubscribe from this group and stop receiving emails from it, send an email to basilisk-fr...@googlegroups.com.
--
/^..^\
( (••) ) Wojciech (Voitek) ANISZEWSKI
(|)_._(|)~
OrcId : https://orcid.org/0000-0002-4248-1194
Scholar : https://tinyurl.com/y28b8gfp
RG : https://www.researchgate.net/profile/Wojciech_Aniszewski
Mastodon: @w...@fediscience.org
Twitter : @echo_dancers3
GPG ID : AC66485E
Wojciech Aniszewski
Jul 26, 2024, 5:23:53 AM7/26/24
to anisz...@dalembert.upmc.fr, Shyam Sunder Yadav, basilisk-fr
Ah, yes, problem solved, 2017R3 opens VTU: https://tecplot.com/2017/11/16/vtk-data-loader/
This works on uniform and octree, with minor issues but usable.
cheers
Voitek
> To view this discussion on the web visit https://groups.google.com/d/msgid/basilisk-fr/ZqNV3nu-IA7Uy5OU%40orion.
This works on uniform and octree, with minor issues but usable.
cheers
Voitek
Wojciech Aniszewski
Jul 26, 2024, 9:25:07 AM7/26/24
to Ajay Rawat, anisz...@dalembert.upmc.fr, basil...@googlegroups.com
Hello Ajay,
Yes, that's true, the module produces cell data. I don't know about Tecplot, but
Paraview has a filter "Cell Data to Point Data" which solves the problem. Moreover,
no small number visu sources (e.g. cutplanes) use cell data as well so you can even avoid interpolation.
regards
Voitek
On Fri, Jul 26, 2024 at 05:18:35PM +0530, Ajay Rawat wrote:
> Dear Wojciech Aniszewski,
> I could use the "output_vtu_foreach.h" with some success and noticed that
> it produces the *.vtu outputs.
> But the output is cell data. How do we get interpolated point data using
> output_vtu_foreach.h?
>
> Best regards
> Ajay RAWAT
> > https://groups.google.com/d/msgid/basilisk-fr/ZqNV3nu-IA7Uy5OU%40orion.
> >
>
>
> --
> Ajay Rawat
> Kalpakkam, IGCAR
>
> -------------------------------------------------------------------------
> Save Himalayas....
> -------------------------------------------------------------------------
Yes, that's true, the module produces cell data. I don't know about Tecplot, but
Paraview has a filter "Cell Data to Point Data" which solves the problem. Moreover,
no small number visu sources (e.g. cutplanes) use cell data as well so you can even avoid interpolation.
regards
Voitek
On Fri, Jul 26, 2024 at 05:18:35PM +0530, Ajay Rawat wrote:
> Dear Wojciech Aniszewski,
> I could use the "output_vtu_foreach.h" with some success and noticed that
> it produces the *.vtu outputs.
> But the output is cell data. How do we get interpolated point data using
> output_vtu_foreach.h?
>
> Best regards
> Ajay RAWAT
> >
>
>
> --
> Ajay Rawat
> Kalpakkam, IGCAR
>
> -------------------------------------------------------------------------
> Save Himalayas....
> -------------------------------------------------------------------------
Reply all
Reply to author
Forward
0 new messages