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Error with /genomes

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Andreu Paytuvi

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Mar 17, 2022, 10:47:15 AM3/17/22
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Good afternoon,

I am developing an app in BaseSpace and I am sending some tests from the Input Form to a local Agent. While executing the Docker container, I get an error:

2022-03-17 14:42:59.939 [INFO ] - Starting application container (attempt 1).
2022-03-17 14:43:00.450 [ERROR] - Error starting application container: error while creating mount source path '/genomes': mkdir /genomes: file exists


Why it keeps throwing this error? I don't create this directory when building the Docker image, so in the image this directory doesn't exist.

Thanks in advance,
Andreu

Al Maynard

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Mar 30, 2022, 10:41:16 AM3/30/22
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I'd definitely try this again using regular launch instead of send to local - a lot of errors like this are specific to running locally which is very hard to get set up correctly.

Andreu Paytuvi

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Apr 5, 2022, 10:11:00 AM4/5/22
to basespace-developers
Thanks Al for your answer.

But how should I start a regular launch? I only see 3 options in the form:
  • Send to local agent
  • Create AppSession
  • Simulate launch
The third option doesn't launch the app though.

Thanks in advance.

Al Maynard

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Apr 5, 2022, 5:03:10 PM4/5/22
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There should also be a big purple "LAUNCH APPLICATION" button in the form itself that you can use. You'll need some iCredits but a free trial account is fine. 


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Andreu Paytuvi

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Apr 6, 2022, 4:11:43 AM4/6/22
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Should it appear once the application is submitted for review? I didn't, yet, and I can't find this button in anywhere.

Al Maynard

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Apr 6, 2022, 9:40:29 AM4/6/22
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Probably best to reach out to tech support with your details. It should be there!

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