BamUtil Version 1.0.11 released

[bamUtils]

BamUtil.1.0.11 Release Notes

• BamUtil.1.0.11.tgz‎ - Released 2/28/2014
  • Requires, but does not include: libStatGen version 1.0.11
  • Adds support for 'B' & 'f' tags that did not work properly before
  • Update splitBam & polishBam
    • Update to work properly if log & output file are not specified (no longer creates '.log')
  • Update Main dummy/example tool to indicate the correct tool
  • Update to bam2FastQ, clipOverlap, filter, mergeBam, splitBam, squeeze, stats
    • Cleanup usage/parameter descriptions
  • Update revert
    • Update compatibility with libStatGen due to 'B' & 'f' tag handling updates
  • Add tests for 'B' & 'f' tags

If you are interested in this Update, the new version can be downloaded at:

http://genome.sph.umich.edu/wiki/BamUtil#Releases

or

https://github.com/statgen/bamUtil

You must also update to the most recent version of libStatGen, 1.0.11, http://genome.sph.umich.edu/wiki/LibStatGen_Download or https://github.com/statgen/libStatGen

Let me know if you have any questions.

Mary Kate Wing