bali-phy runner

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jo...@generisbio.com

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Dec 4, 2018, 3:45:13 PM12/4/18
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Hi, All,

Although the manual has the humorous "stop it when it is done" instruction, I'm curious if anybody has implemented a queue runner for bali-phy.  Such code would ideally:
  1. Be packaged in a nice way (e.g., a python package installable from pip).
  2. Accept simple commands to maintain a list of jobs that could run for a month or so.
  3. Have command-line arguments specifying the width of individual calculations in CPU's as well as the number of parallel computations.
  4. Check for convergence in individual threads and jointly.
  5. Optionally copy a converged MC point from one thread into new threads.
  6. Stop after a certain number of iterations.

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