Ask EPD

Dear Paul, Thanks for your inquiry. Glad to hear that you are using UCNEbase. We also appreciate that

Dear Ben, Thanks for bringing the issues with FAM182B_1 and TXNIP_2 to our attention. We really

I think I have fixed the bug, You may try a new version at https://epd.expasy.org/pwmtools/test/

This bug should be fixed. (I get three NFAT5 sites in the human IL2 promoter). Thanks you for having

See my reply to Shah Mohd from Jan 17, 2025, copied below: You can use the "Search Motif Tool

We are in the process of generating an EPD module for Barley ... more to follow on this list when we

I guess you did not see my previous email. Should be solved now! Sébastien On 17.03.2025 17:49, Meera

Hi could you give more information about this? Le dimanche 16 mars 2025 à 15:03:19 UTC+1, GAYATHRI

Hi Younis We have recently added the possibility to see a raw EPD entry in text format, what your

Dear Robert, I have looked into this issue and am embarrassed to say that this is clearly an error in

Dear Deepak, I'm not sure whether you have to worry at all. If I understand correctly, your SNP

You can use the "Search Motif Tool" on the promoter entry viewer page, for instance go to:

H.sapiens Jan. 2022 (T2T CHM13v2.0/hs1) is now available on: https://epd.expasy.org/pwmtools/ https:/

Hello, I hope this email finds you well. I am Mohd Hussain Shah, working as Postdoc at NEI/NIH. I am

Dear David, Unfortunately, this is currently not possible. However, you can extract this information

Promoters often have multiple initiation sites (TSSs). Promoters in EPD are assigned to three types:

Dear Benoit, Unfortunately, the rabbit is not part of the model organism collection currently

Everything works perfectly with your instructions, and it runs really fast! Thanks a lot for this

Dear Anja, Sorry, this has taken a long time. The HOCOMOCOv12 CORE (HUMAN + MOUSE orthologs) TF

Dear Philipp, Thank you for your reply and explanation. I look forward to an update. In the meanwhile

Dear Donu, Thank you for reporting this issue. The promoter you are looking for can be found under

Hi there, Thank you for creating such a useful tool! I am trying to download promoter sequences for H

Dear all I am using your tool to evaluate the quality of the motifs of specific transcription factors

Hi, I am trying to retrieve the promoter sequence of a gene from EPD but everytime I input the "

Hello, the Search Motif Tool is not giving any results when pressing "search". It usually

Dear Sirs, I've tried several times in different browser (chrome, mozilla, and explorer) and I

Hi Rob sorry for the delay, we had issues with the mail server. https://epd.expasy.org/UCNEbase is

Good morning, I have been attempting to retrieve the potential promoter sequence for REST over the

Hello, I am unable to retrieve the promoter sequences from EPD since few weeks. When I hit the option

Hello, I was using the search motif tool to identify the number of transcription factor binding sites