You could get to those N and P application rates by using one fertilizer or a combination of fertilizer types. The xx-xx-xx is in fact the N-P2O5-K2O ratio of the fertilizer. The fertilizers and their nutrient contents are described in Appendix A.4 of the SWAT2012 I/O Manual. You can also add a new fertilizer type that would give you the N and P contents you need to get to your desired application rate. But from the numbers you offer, it appears as though either 05-10-15, 05-10-10, or 05-10-05 would be close enough to your desired ratio, with all 3 types having 0.050 for Min-N and 0.044 of Min-P (per page 609 of manual). Just add the amount of fertilizer (kg/ha) you need to get to your total application rate for N and P. Note that Min-P = P2O5 times 0.44 (you are probably interested in Min-P, not P2O5).
--Charles