anvi-script-run-eggnog-mapper

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Iris Noordermeer

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Dec 13, 2022, 11:15:14 AM12/13/22
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Hi Anvi'o developers, 

I ran the latest version of emapper.py (version 2.1.9) to annotate genes in the contigs.db file. Thereafter, I tried running the anvi-script-run-eggnog-mapper to import the annotations however, I get the following error:

Config Error: Anvi'o does not know about the version you requested. Here are the ones
              available: 2.0.0, 2.0.1, 2.0.5, 2.1.4, 2.1.6  

The newest version of emapper is also not on the Github in the self.available_parsers. Therefore, I was wondering if the anvi-script-run-eggnog-mapper was already updated or that I am doing something wrong. 
I used the following command:
anvi-script-run-eggnog-mapper -c CONTIGS.db -- annotation EGGNOG_mapped.emapper.annotations --use-version 2.1.9

Thank you for you time and help! 

Best, 
Iris




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