identifying proteins that are very similar in the sequence.

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joanna Zamel

Apr 28, 2021, 7:10:32 AM4/28/21
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Hi everyone,
I have a problem with the identification of highly similar proteins in MaxQuant. for example, Tubulins such as Tubulin B; there is a group of Tubulin B proteins that are almost identical in the sequence except for a few amino acids.  I have repeats of each experiment and MaxQuant chooses to show one variant in each repeat. does anyone know how to overcome this problem?
Thank you.
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