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Andromeda Help
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Jane Khudyakov
Sep 14
MaxQuant v2.4.4 quits at MSMS first search
I just recently updated to MaxQuant v2.4.4 and am using it on a Windows 10 machine with 64 GB RAM
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MaxQuant v2.4.4 quits at MSMS first search
I just recently updated to MaxQuant v2.4.4 and am using it on a Windows 10 machine with 64 GB RAM
Sep 14
fredrik.t...@gmail.com
,
Vyacheslav Tretyachenko
3
Aug 19
DIA analysis of WIFF files with MQ 2.4.2.0 Crash
Hi, did you manage to solve the problem? I encountered the same issue. Cheers, Slava Dne pondělí 26.
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DIA analysis of WIFF files with MQ 2.4.2.0 Crash
Hi, did you manage to solve the problem? I encountered the same issue. Cheers, Slava Dne pondělí 26.
Aug 19
Roddy Fo
May 16
Maxquant Label Free Quantification
Hi, I am running peptides identification and quantification on Maxquant version 2.2.0.0. I found some
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Maxquant Label Free Quantification
Hi, I am running peptides identification and quantification on Maxquant version 2.2.0.0. I found some
May 16
Florian Wolfgang Otto
Apr 17
TIMS TOF Pro MQ Search Crushing
Hello, I got my TIMS ToF Data and when I run the search after the "Feature Detection Tims"
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TIMS TOF Pro MQ Search Crushing
Hello, I got my TIMS ToF Data and when I run the search after the "Feature Detection Tims"
Apr 17
Daniela Ferretti
Mar 17
MAXQUANT SUMMER SCHOOL 2023 BOSTON
We are very excited to announce that the 14th MaxQuant Summer School 2023 #MQSS2023 is going to be in
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MAXQUANT SUMMER SCHOOL 2023 BOSTON
We are very excited to announce that the 14th MaxQuant Summer School 2023 #MQSS2023 is going to be in
Mar 17
Tony Ramirez
Mar 11
Maxquant missing tables
Hello, I run data and this time it worked but there is no display of the results. Any suggestions?
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Maxquant missing tables
Hello, I run data and this time it worked but there is no display of the results. Any suggestions?
Mar 11
Julie Courraud
Mar 9
Updated description of the Andromeda scoring in layman terms?
Dear all, I've been searching a recent description of how the Andromeda score is made, and mostly
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Updated description of the Andromeda scoring in layman terms?
Dear all, I've been searching a recent description of how the Andromeda score is made, and mostly
Mar 9
Ameesha Paliwal
Jan 17
MaxQuant crashing
Hi everyone, I'm pretty new to using MaxQuant and I'm having some trouble with a large
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MaxQuant crashing
Hi everyone, I'm pretty new to using MaxQuant and I'm having some trouble with a large
Jan 17
Amadeus
12/4/22
Manual decoy database search option needed and mgf input needed.
Hello, Does Maxquant support manual decoy or non decoy database search option? And my input file is
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Manual decoy database search option needed and mgf input needed.
Hello, Does Maxquant support manual decoy or non decoy database search option? And my input file is
12/4/22
Laura Crespo
10/17/22
como descargar la version 1.5.5.3 de perseus,?
Hola buenos dias queria preguntar si alguien sabe como descargar la version 1.5.5.3 de perseo ya que
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como descargar la version 1.5.5.3 de perseus,?
Hola buenos dias queria preguntar si alguien sabe como descargar la version 1.5.5.3 de perseo ya que
10/17/22
Katie Schaefer
,
Animesh Sharma
2
9/5/22
Maxquant silac analysis for TIMS-TOF data
Hi Katie, Did you or anyone else has figure out how to do this? Best regards, Ani "The Answer
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Maxquant silac analysis for TIMS-TOF data
Hi Katie, Did you or anyone else has figure out how to do this? Best regards, Ani "The Answer
9/5/22
Manuel Fernandez
5/12/22
MaxQuant Task .Net Runtime Error
Installed a pc from scratch and tried to run a LFQ analysis in MaxQuant 1.6.8. It crashed with a .
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MaxQuant Task .Net Runtime Error
Installed a pc from scratch and tried to run a LFQ analysis in MaxQuant 1.6.8. It crashed with a .
5/12/22
chenna...@gmail.com
, …
mayank gupta
7
1/3/22
Perseus annotation download
You can try this link https://datashare.biochem.mpg.de/s/qe1IqcKbz2j2Ruf On Wednesday, 13 November
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Perseus annotation download
You can try this link https://datashare.biochem.mpg.de/s/qe1IqcKbz2j2Ruf On Wednesday, 13 November
1/3/22
chenna...@gmail.com
12/1/21
MaxQuant label-free quantification
Hi, When I use MaxQuant for the LFQ analysis. I found some proteins from my experimental sample have
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MaxQuant label-free quantification
Hi, When I use MaxQuant for the LFQ analysis. I found some proteins from my experimental sample have
12/1/21
Harsh Thakkar
11/26/21
MaxQuant Version 2.0.3.0
I tried to analyzed my files, it started but i got crashed every time can anybody tell what should be
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MaxQuant Version 2.0.3.0
I tried to analyzed my files, it started but i got crashed every time can anybody tell what should be
11/26/21
Low Teck Yew
,
Inês Caramelo
2
11/11/21
Protein ID in new version of MaxQaunt
Hello, I have never used a previous version but my data from TOF 6600 is getting a really low
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Protein ID in new version of MaxQaunt
Hello, I have never used a previous version but my data from TOF 6600 is getting a really low
11/11/21
Sunwoo Lab
, …
Siena Barton
3
11/5/21
Maxquant dotnet problem
Hi, I found that deleting and re-downloading Maxquant after installing .NET worked. If I use the
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Maxquant dotnet problem
Hi, I found that deleting and re-downloading Maxquant after installing .NET worked. If I use the
11/5/21
Ekaterina Vansovich
10/26/21
Andromeda stand alone version
Hey everyone, does anyone know if andromeda's stand-alone version is still supported? and if yes,
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Andromeda stand alone version
Hey everyone, does anyone know if andromeda's stand-alone version is still supported? and if yes,
10/26/21
Ekaterina Vansovich
10/5/21
isobarQuant with the Maxquant search engine
Hi everyone, I'm new at working with MS data and I hope maybe someone more experienced could help
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isobarQuant with the Maxquant search engine
Hi everyone, I'm new at working with MS data and I hope maybe someone more experienced could help
10/5/21
邓岚
9/28/21
adjacent fraction for MBR
Hi I do not know which fractions were adjacent when using MBR, what can I do? Thanks
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adjacent fraction for MBR
Hi I do not know which fractions were adjacent when using MBR, what can I do? Thanks
9/28/21
邓岚
9/28/21
adjacent fraction for Match between runs
Hi For MBR, "Matching is performed between the same and adjacent fractions if fraction numbers
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adjacent fraction for Match between runs
Hi For MBR, "Matching is performed between the same and adjacent fractions if fraction numbers
9/28/21
efrat glick
8/23/21
LFQ MQ 2.0.1.0 vs LFQ MQ 1.6.5
Hi, I tried MQ 2.0.1.0 for LFQ analysis and I noticed that there are different parameters to define
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LFQ MQ 2.0.1.0 vs LFQ MQ 1.6.5
Hi, I tried MQ 2.0.1.0 for LFQ analysis and I noticed that there are different parameters to define
8/23/21
Manuel Ivan Villalobos Solis
8/12/21
Values in Post-hoc Tukey's results
Hi everyone, I am comparing results that I get from doing a Tukey's test in Perseus for
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Values in Post-hoc Tukey's results
Hi everyone, I am comparing results that I get from doing a Tukey's test in Perseus for
8/12/21
Alejandro Cohen
7/9/21
Peptide Missing?
Hi MQ people, I'm doing a quick comparison for human LFQ data I get from .raw files (QExactive)
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Peptide Missing?
Hi MQ people, I'm doing a quick comparison for human LFQ data I get from .raw files (QExactive)
7/9/21
Xueyang ZHANG
6/28/21
where are the settings for crosslinking?
Hi, I have downloaded Maxquant 2.0.1.0, but there is no settings for crosslinking. I think it should
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where are the settings for crosslinking?
Hi, I have downloaded Maxquant 2.0.1.0, but there is no settings for crosslinking. I think it should
6/28/21
Kasandra Pedersen
6/27/21
Normalization in Perseus
Hi, maybe someone can explain the normalization step "subtract" in persues In the
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Normalization in Perseus
Hi, maybe someone can explain the normalization step "subtract" in persues In the
6/27/21
Jared Churko
,
Nathaniel Jorgenson
2
6/23/21
MaxQuant crashing Thread?
I am having the same issue, but it is only with certain files. Did you find any solution to the
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MaxQuant crashing Thread?
I am having the same issue, but it is only with certain files. Did you find any solution to the
6/23/21
joanna Zamel
4/28/21
identifying proteins that are very similar in the sequence.
Hi everyone, I have a problem with the identification of highly similar proteins in MaxQuant. for
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identifying proteins that are very similar in the sequence.
Hi everyone, I have a problem with the identification of highly similar proteins in MaxQuant. for
4/28/21
julie van
4/22/21
advice on computer specs
I'm hoping to set up a computer for MaxQuant database searching. Any advice on which computers or
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advice on computer specs
I'm hoping to set up a computer for MaxQuant database searching. Any advice on which computers or
4/22/21
Kedric Milholland
, …
Rachael Barry
8
3/5/21
MaxQuant 1.6.15.0 gives error after hitting start.
Thank you! That worked On Friday, 5 March 2021 at 11:57:23 UTC fernando...@gmail.com wrote: Hi
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MaxQuant 1.6.15.0 gives error after hitting start.
Thank you! That worked On Friday, 5 March 2021 at 11:57:23 UTC fernando...@gmail.com wrote: Hi
3/5/21