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Pooja Goswami
,
Luis Pedro Coelho
2
Mar 7
prediction from. whole genome
Dear Pooja, Yes, the contigs subcommand is the right way to do that. HTH, Luis Luis Pedro Coelho |
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prediction from. whole genome
Dear Pooja, Yes, the contigs subcommand is the right way to do that. HTH, Luis Luis Pedro Coelho |
Mar 7
Célio Dias Santos Júnior
10/30/23
Re: Error in abundance profiling
Dear Amiteash, I could not reproduce your error. However, it seems that something in the handling of
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Re: Error in abundance profiling
Dear Amiteash, I could not reproduce your error. However, it seems that something in the handling of
10/30/23
Qi Feng
,
Célio Dias Santos Júnior
2
5/23/23
If RNA metagenome sequence can be used for macrel analysis
Dear user, One possible suggestions is for you to assemble and predict the small proteins by side
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If RNA metagenome sequence can be used for macrel analysis
Dear user, One possible suggestions is for you to assemble and predict the small proteins by side
5/23/23
Percy Ramlet
,
Célio Dias Santos Júnior
2
6/20/22
error while running Macrel
Dear Percy, This warning is due to the different versions of scikit-learn used to generate the pickle
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error while running Macrel
Dear Percy, This warning is due to the different versions of scikit-learn used to generate the pickle
6/20/22
Javier Calvelo
,
Luis Pedro Coelho
4
12/19/21
Error running Macrel on Wormbase genome
As a workaround, you can split the genome into chunks. That should work Luis
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Error running Macrel on Wormbase genome
As a workaround, you can split the genome into chunks. That should work Luis
12/19/21
Célio Dias Santos Júnior
3/19/21
AMPSphere has now families, alignments and trees!
Dear AMPSphere community, A short time after the release of AMPSphere v.2021-02, we now make
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AMPSphere has now families, alignments and trees!
Dear AMPSphere community, A short time after the release of AMPSphere v.2021-02, we now make
3/19/21
Alonna Wright
,
Luis Pedro Coelho
5
3/14/21
Mapping predicted AMPs back to original contigs?
Great, but this also indicates a lack of good documentation, which we will work on. Thanks Luis Luis
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Mapping predicted AMPs back to original contigs?
Great, but this also indicates a lack of good documentation, which we will work on. Thanks Luis Luis
3/14/21
Célio Dias Santos Júnior
3/4/21
AMPSphere v.2021-02 is now available!
Dear fellow researchers, We are glad to inform you that the database AMPSphere v.2021-02 is now
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AMPSphere v.2021-02 is now available!
Dear fellow researchers, We are glad to inform you that the database AMPSphere v.2021-02 is now
3/4/21
Célio Dias Santos Júnior
12/22/20
New Release of Macrel (v.1.0.0)
Dear users, We from AMPsphere wish you happy holidays. There are some announcements to make before
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New Release of Macrel (v.1.0.0)
Dear users, We from AMPsphere wish you happy holidays. There are some announcements to make before
12/22/20
celio.diasjunior
,
Luis Pedro Coelho
2
11/25/20
Great news: the paper describing Macrel is in press!
We are also shortly going to release Macrel 1.0 to coincide with the publication. At the moment, it
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Great news: the paper describing Macrel is in press!
We are also shortly going to release Macrel 1.0 to coincide with the publication. At the moment, it
11/25/20
Luis Pedro Coelho
,
Martin Klapper
5
10/28/20
ANN Macrel release 0.6.0
Unfortunately, it seems that atomicwrites causes issues on Mac OSX (https://github.com/bioconda/
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ANN Macrel release 0.6.0
Unfortunately, it seems that atomicwrites causes issues on Mac OSX (https://github.com/bioconda/
10/28/20
Martin Klapper
, …
Luis Pedro Coelho
5
9/26/20
log file flag and AMP size cutoff
On Wed, 23 Sep 2020, at 10:04 AM, Martin Klapper wrote: Hi all, at first - thanks for developing
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log file flag and AMP size cutoff
On Wed, 23 Sep 2020, at 10:04 AM, Martin Klapper wrote: Hi all, at first - thanks for developing
9/26/20