Groups

AmphoraNet

Contact owners and managers

1–9 of 9

Welcome to the AmphoraNet support forum! If you have any questions, suggestions, upgrading ideas related to AmphoraNet webserver please feel free to post it.

0 selected

Matthias Groeschel

10/21/19

Batch processing on multiple FASTA files

Hi all, many thanks for developing this wonderful tool. Is it possible to run Amphora on multiple

unread,

Batch processing on multiple FASTA files

Hi all, many thanks for developing this wonderful tool. Is it possible to run Amphora on multiple

10/21/19

JL Campo, Csaba Kerepesi2

12/26/18

Can i visualize the output file as phylogenomic tree?

Thank you for the question! Good idea, but unfortunatelly, we have not developed such a tool yet. I

unread,

Can i visualize the output file as phylogenomic tree?

Thank you for the question! Good idea, but unfortunatelly, we have not developed such a tool yet. I

12/26/18

1/11/17

Sample input files to try AmphoraNet

Here we collected input files and databases to try AmphoraNet. Bacterial genomes: - Treponema

unread,

Sample input files to try AmphoraNet

Here we collected input files and databases to try AmphoraNet. Bacterial genomes: - Treponema

1/11/17

9/10/14

News: AmphoraNet upload limit raised up to 50 MB

We have raised up the upload limit of the AmphoraNet webserver to 50 MB. Tested on the assembled

unread,

News: AmphoraNet upload limit raised up to 50 MB

We have raised up the upload limit of the AmphoraNet webserver to 50 MB. Tested on the assembled

9/10/14

12/5/13

News: AmphoraNet article are available online

We are pleased to announce that AmphoraNet article are available online: Csaba Kerepesi, Dániel Bánky

unread,

News: AmphoraNet article are available online

We are pleased to announce that AmphoraNet article are available online: Csaba Kerepesi, Dániel Bánky

12/5/13

4/12/14

How do I visualize the output files?

To visualize the output files of AmphoraNet you can use AmphoraVizu Example: An input file from the

unread,

How do I visualize the output files?

To visualize the output files of AmphoraNet you can use AmphoraVizu Example: An input file from the

4/12/14

cameron coates, Csaba Kerepesi2

9/1/13

How can I avoid manually concatenating the output sequences

Thank you for your interest about AmphoraNet! To concatenate text files you can use "cat"

unread,

How can I avoid manually concatenating the output sequences

Thank you for your interest about AmphoraNet! To concatenate text files you can use "cat"

9/1/13

9/8/14

Sample output files

Here we shared some sample output files of AmphoraNet and then evaluate them. Bacterial genome: -

unread,

Sample output files

Here we shared some sample output files of AmphoraNet and then evaluate them. Bacterial genome: -

9/8/14

4/16/15

What can I do if my input file is too big?

If your input file is too big then you can cut off it. Here are some help to do that: 1. Use head and

unread,

What can I do if my input file is too big?

If your input file is too big then you can cut off it. Here are some help to do that: 1. Use head and

4/16/15

Search

Clear search

Close search

Google apps

Main menu