Did that happen in that script? I have no idea. I only ever read one,
which was actually very close to the film we got, but most of the
Decepticon names were different (Barricade was Brawl, I guess trying
to be a pun on Prowl; I think Blackout was Soundwave, Brawl was
Devastator) and the script already had Ironhide in it. (Ironhide
replaced Arcee.) But things like Glen and the hacker chick were
already there (and a lot more useful!), the AllSpark (I think still
called the Energon Cube), Megatron frozen in ice, etc. I think Jazz
even still died. I'll try and dig it up; it was definitely called
"Prime Directive," which was a codename for TF1.
I did some Googling and found the one I'm talking about; I don't know
if it's the same one you mentioned. (For what it's worth, myself and a
friend sat down and read the entire script when it came out, before
the movie, and the actual movie we saw in our heads was fucking
awesome.)
http://www.megaupload.com/?d=CC5A2LRC