I suspect that you have Alt-F packages installed in that filesystem. Verify: Packages->Alt-F, Packages Installed On, FS.
Or on the command line 'aufs.sh -l', should display "/mnt/XXX/Alt-F=rw", where XXX is the device where Alt-F packages are installed.
If that is the reason, in Packages->Alt-F you can try to "DeactivateNow", but it will probably fail. You have to uncheck "Boot Enable", Submit, reboot, perform the conversion, check "Boot Enable", Submit, and "ActivateNow" without the need for further reboots.
Of course, while aufs is not enabled you will not have the additional on-disk installed packages nor updates to fw pre-installed packages.