I have recently started using IMa2p to speed up my runs with microsatellites - I noticed that IMa2 seems to run considerably slower with microsats then mitochondrial sequencing data. However I have noticed that the swapping rates are really terrible in comparison to previous runs that I have conducted on IMa2 (using the same commands). My t-curve is also non-existent.
I have attached my output after a 1 day run and ~ 13,000 genealogies saved. I'm not sure if it just needs to be run longer or if I have to change the heating commands. And I don't know what to do in regards to the t-curve.
I would really appreciate some advice.