Conference call agenda

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Jeremy Zucker

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Jun 16, 2006, 1:37:18 PM6/16/06
to debuggin...@googlegroups.com

Things to ask Adam:
1. What did we do?
a. Broken up the 1963 into
b. Generic reactions
c. Focusing on transport
2. What needs to be done?
a. Transport
b. Directionality
c. genes associated with reactions
d. rest of compounds
3. Who is doing what?
a. Ian for transport
b. Ingrid compound mappings
c. KR: publish code and data
4. Final product.
a. A tab-delimited mapping file for exact and inexact matches with
explanations
b. A BioPAX file with equalities and subsumptions inferred.
c. Incorporation into iAF1xxx

ba...@cc.usu.edu

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Jun 18, 2006, 11:03:43 PM6/18/06
to Debugging the Bug
Jeremy
Would you still want to send me the list of compounds in ECOCYC and
iJr904 for perusing and matching them to identify unique ones across
them?
If so, kindly send me the files with the compounds as text.
Regards
BALA.

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