Hi,
I have an Hg38 HiC dataset that I want to compare with some loop calls already available in the Juicebox database that are made from Hg19 HiC data.
I figured, I could just download the Hg19 loop annotations from the juicebox database and use the UCSC liftover tool, but I think the .bedpe file is way too complicated as I keep getting an error message. Do you have a trick to do that conversion?
Best,
Mikkel