eigenvector terminating abruptly

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Saumya

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Mar 5, 2023, 5:34:03 PM3/5/23
to 3D Genomics
Dear all,

I am trying to run eigenvector  command on 100kb resolution however, it is ends without output. I am already using "-p" flag  and able to get output at lower resolution.

java -Xmx50000m   -jar ./juicer_tools.2.20.00.jar eigenvector  -p VC  ./merged30.hic chr1 BP 100000
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2023-03-05T20:17:46,201]  [Globals.java:138] [main]  Development mode is enabled
WARNING: Eigenvector calculation at high resolution can take a long time


Any advice from the forum will be very helpful,

Many thanks in advance,

Best,
Saumya



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