igv-help

Welcome to the igv-help group.  This is the official help and discussion forum for the Integrative Genomics Viewer (IGV). Please post questions, bug reports, and suggestions here. If you're having a problem, try searching this list to see if your question has already been addressed. Everyone is encouraged to contribute by suggesting bug fixes, and joining discussions of feature enhancements. Additional resources can be found at www.igv.org

If posting about a problem, please include:
  1. The version of IGV you are using, and your computer operating system.
  2. What you did. If the problem happens when you open a file and/or view certain genomic coordinates, attach the file* (or provide a link) and specify the genomic coordinates. Please DO NOT paste the contents of your file into an email or in the group's web interface, as files are whitespace sensitive which gets lost when sent in the body of an email. 
  3. What you expected to happen 
  4. What actually happened 
  5. Your igv.log file. It will be in <your home directory>/igv. 
Thanks,
The IGV team.


Showing 1-20 of 1962 topics
Created .genome file takes longer to load than default Mthabisi Moyo 10/20/17
IGV Default Code for Nucleotides Utkarsh Kapoor 10/20/17
Problem with sacCer3 genome file richar...@umassmed.edu 10/18/17
Using BAI file url in batch config script Stef van Lieshout 10/18/17
A strange bug gokalpcel...@gmail.com 10/17/17
Can I export DNA sequences from IGV? X. Yin 10/16/17
changing set data range from auto in IGV WK 10/14/17
Cannot launch IGV after Java 9 update Mao-Lun Weng 10/13/17
Grouping by tags in IGV 2.4.0 or 2.4.1 on Mac Sierra OS Irena Fischer-Hwang 10/12/17
Update the reference sequences Hiruni Wijesena 10/12/17
mouse ensembl annotation wibr.bioi...@gmail.com 10/11/17
Error fetching genome list: connect timed out Philip Lijnzaad 10/10/17
Load from server not working ( Windows 10 ) Shubha 10/5/17
Problems downloading igvtools Magdalena Arnal 10/5/17
New Genome martina...@berkeley.edu 10/4/17
IGV behind a proxy Miguel Gutiérrez 10/4/17
Allow midRanges coloring in points/scatter graph? Ies Nijman 10/2/17
.gb annotations all showing incorrect start positions at coordinate 1 kevi...@stanford.edu 10/1/17
Loading a session doesn’t load custom tracks L 9/30/17
creating .genome files via command line kevi...@stanford.edu 9/30/17
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