rna-star

Welcome to the general user group for STAR, RNA-seq aligner.
Please check https://github.com/alexdobin/STARfor details.

Please be patient when submitting your first post - I have to moderate them to avoid junk mail.


Showing 1-20 of 1057 topics
Would STAR filter redundant reads for RNA-seq mapping chensu...@gmail.com 2:05 PM
Usual parameters? - quality string length is not equal to sequence length, fix your fastq file ERA 1:56 PM
STAR for miRNA praful aggarwal 1:51 PM
My star alignment setting sjdbOverhang 149 was not accepted by the aligner 严锋 1:32 PM
Realigning Tophat files with STAR Darryl Nousome 12:19 PM
Unmapped reads and multi-mappers for S. cerevisease Grant 1/18/17
FATAL ERROR: cannot insert junctions on the fly because of strand GstrandBit problem christian...@gmail.com 1/18/17
Hard-clipped Reads in *.Aligned.out.bam Amir M. Zadeh 1/18/17
Soft clipping vs EndToEnd for differentially alternative splicing analysis Ehsan Hajiramezanali 1/18/17
NCBI's GFF file: how to get gene counts with STAR Alexey Kozlenkov 1/18/17
sjdbOverhang and high proportion of unmapped reads too shirt Anna Quaglieri 1/13/17
issue with SA files packing luca a 1/13/17
what(): vector::_M_range_check ERA 1/12/17
Could not open readFilesIn Ehsan Hajiramezanali 1/12/17
Alignment stats summary in STAR log out file (*Log.final.out) j...@pieriandx.com 1/12/17
terminate called after throwing an instance of 'std::bad_alloc' ERA 1/10/17
STAR MAPPING TO DROSOPHILLA GENOME Varun Gupta 1/10/17
'std::out_of_range' During index creation while processing GTF Nicholas Lorusso 1/10/17
Getting all SAM attributes printed to transcriptome BAM rubi 1/9/17
2-pass mapping reduces the number of uniquely mapped reads Babak A 1/8/17
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