Mega2

This group provides support to users of the Mega2 “Manipulation Environment for Genetic Analyses” program, which is a data-handling program for facilitating genetic linkage and association analyses. Mega2 is available from http://watson.hgen.pitt.edu/register/  and Mega2 documentation is available here.

Showing 1-20 of 20 topics
how to convert Plink files to Merlin format Ana Marija 9/18/20
#10:disk I/O error Ana Marija 6/23/20
How to convert Plink case-control to Merlin format? Ana Marija 6/23/20
How to include covariates in Mega2famSKATRC Baojian Fan 5/19/20
library interface? Joshua Pritikin 2/20/19
Example conversion PLINK to Merlin Yann 1/24/19
read_impute_bgen2.cpp:100: error: no matching function for call to ‘BgenParserGenotypeReadHelper::get_sample_ids(BgenParserGenotypeReadHelper::genotyp Shicheng Guo 8/22/18
Mega2 install error Teresa Filshtein 8/22/18
Mega2 version 5.0.0: 'no database' legacy mode not working Dan Weeks 8/22/18
Conversion of IMPUTE2 .gen format to .vcf format with dosage value (DS) kumardeep chaudhary 7/9/18
Our R package Mega2R is now available in CRAN Dan Weeks 11/9/17
errors "illegal affect", "disconnected", "check_ped_relations" WARNING -> Unconnected entries Angela Parody 10/25/17
Loop breaking and Mendel output file bugs Nandita Mukhopadhyay 8/5/15
SimWalk2 format conversion Nandita Mukhopadhyay 8/5/15
error 'mega2log2html.pl' may not be installed Jessica Perez Alquicira 7/30/15
Mega2 v4.8.0 released: now reads IMPUTE2 format input Dan Weeks 6/13/15
segmentation fault Arija 4/2/15
Mega2 v4.7.0 assumes trait is dichotomous by default when reading from a PLINK fam file. Dan Weeks 6/13/14
Encountered error about more than two alleles seen for 2 bit compression Dan Weeks 11/26/13
Mega2 v4.5.8: Compilation problems on Red Hat Enterprise Linux 5.9 Dan Weeks 6/11/13