Error processing navigation template: /HeaderIncludes.vm, using module: VelocityNavigation
hindex100
Hi XNAT team,
We are running XNAT1.6.4. After restarting the Tomcat, it has the following errors:
cat turbine.log
ERROR org.apache.turbine.util.template.TemplateNavigation - Error processing navigation template: /HeaderIncludes.vm, using module: VelocityNavigation
org.apache.turbine.util.TurbineException: Error rendering Velocity template: navigations//HeaderIncludes.vm
at org.apache.turbine.services.velocity.TurbineVelocityService.renderingError(TurbineVelocityService.java:471)
at org.apache.turbine.services.velocity.TurbineVelocityService.handleRequest(TurbineVelocityService.java:287)
at org.apache.turbine.services.velocity.TurbineVelocity.handleRequest(TurbineVelocity.java:71)
at org.apache.turbine.modules.navigations.VelocityNavigation.buildTemplate(VelocityNavigation.java:100)
at org.apache.turbine.modules.navigations.TemplateNavigation.doBuild(TemplateNavigation.java:66)
at org.apache.turbine.modules.Navigation.build(Navigation.java:57)
at org.apache.turbine.modules.NavigationLoader.eval(NavigationLoader.java:104)
at org.apache.turbine.util.template.TemplateNavigation.toString(TemplateNavigation.java:106)
at org.apache.velocity.runtime.parser.node.ASTReference.render(ASTReference.java:321)
at org.apache.velocity.runtime.parser.node.SimpleNode.render(SimpleNode.java:271)
at org.apache.velocity.Template.merge(Template.java:296)
at org.apache.velocity.app.Velocity.mergeTemplate(Velocity.java:492)
at org.apache.velocity.app.Velocity.mergeTemplate(Velocity.java:461)
at org.apache.turbine.services.velocity.TurbineVelocityService.executeRequest(TurbineVelocityService.java:415)
at org.apache.turbine.services.velocity.TurbineVelocityService.handleRequest(TurbineVelocityService.java:281)
at org.apache.turbine.services.velocity.TurbineVelocity.handleRequest(TurbineVelocity.java:71)
at org.apache.turbine.modules.navigations.VelocityNavigation.buildTemplate(VelocityNavigation.java:100)
at org.apache.turbine.modules.navigations.TemplateNavigation.doBuild(TemplateNavigation.java:66)
at org.apache.turbine.modules.Navigation.build(Navigation.java:57)
at org.apache.turbine.modules.NavigationLoader.eval(NavigationLoader.java:104)
at org.apache.turbine.util.template.TemplateNavigation.toString(TemplateNavigation.java:106)
at org.apache.velocity.runtime.parser.node.ASTReference.render(ASTReference.java:321)
at org.apache.velocity.runtime.parser.node.SimpleNode.render(SimpleNode.java:271)
at org.apache.velocity.Template.merge(Template.java:296)
at org.apache.velocity.app.Velocity.mergeTemplate(Velocity.java:492)
at org.apache.velocity.app.Velocity.mergeTemplate(Velocity.java:461)
at org.apache.turbine.services.velocity.TurbineVelocityService.executeRequest(TurbineVelocityService.java:415)
at org.apache.turbine.services.velocity.TurbineVelocityService.handleRequest(TurbineVelocityService.java:281)
at org.apache.turbine.services.velocity.TurbineVelocity.handleRequest(TurbineVelocity.java:71)
at org.apache.turbine.modules.layouts.VelocityOnlyLayout.doBuild(VelocityOnlyLayout.java:116)
at org.apache.turbine.modules.Layout.build(Layout.java:53)
at org.apache.turbine.modules.LayoutLoader.exec(LayoutLoader.java:98)
at org.apache.turbine.modules.pages.DefaultPage.doBuild(DefaultPage.java:146)
at org.apache.turbine.modules.Page.build(Page.java:53)
at org.apache.turbine.modules.PageLoader.exec(PageLoader.java:98)
at org.apache.turbine.Turbine.handleException(Turbine.java:963)
at org.apache.turbine.Turbine.doGet(Turbine.java:822)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:621)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:722)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:305)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
at net.bull.javamelody.MonitoringFilter.doFilter(MonitoringFilter.java:206)
at net.bull.javamelody.MonitoringFilter.doFilter(MonitoringFilter.java:179)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
at org.nrg.xnat.restlet.util.UpdateExpirationCookie.doFilter(UpdateExpirationCookie.java:38)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:369)
at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:109)
at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:83)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:97)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:100)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:78)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.nrg.xnat.security.XnatArcSpecFilter.doFilter(XnatArcSpecFilter.java:40)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:54)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:35)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.nrg.xnat.security.XnatBasicAuthenticationFilter.doFilter(XnatBasicAuthenticationFilter.java:134)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:187)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:105)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.session.ConcurrentSessionFilter.doFilter(ConcurrentSessionFilter.java:109)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.nrg.xnat.security.XnatExpiredPasswordFilter.doFilter(XnatExpiredPasswordFilter.java:149)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:79)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.access.channel.ChannelProcessingFilter.doFilter(ChannelProcessingFilter.java:109)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:381)
at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:168)
at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237)
at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:224)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:169)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:927)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:987)
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:579)
at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:307)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.apache.velocity.exception.MethodInvocationException: Invocation of method 'getSingularDisplayNameForImageSession' in class org.nrg.xdat.display.DisplayManager threw exception class org.nrg.config.exceptions.ConfigServiceException : file size must be less than 10485760 characters.
at org.apache.velocity.runtime.parser.node.ASTMethod.execute(ASTMethod.java:309)
at org.apache.velocity.runtime.parser.node.ASTReference.execute(ASTReference.java:207)
at org.apache.velocity.runtime.parser.node.ASTReference.render(ASTReference.java:250)
at org.apache.velocity.runtime.parser.node.SimpleNode.render(SimpleNode.java:271)
cat velocity.log
2017-09-06 09:55:44,926 [pool-2-thread-1] ERROR velocity - VM #xdatStringBoxOnChange: error : too few arguments to macro. Wanted 6 got 0
2017-09-06 09:55:44,927 [pool-2-thread-1] ERROR velocity - VM #xdatStringBoxOnChange: error : too few arguments to macro. Wanted 6 got 0
2017-09-06 09:55:44,927 [pool-2-thread-1] ERROR velocity - VM #xdatStringBoxOnChange: error : too few arguments to macro. Wanted 6 got 0
2017-09-06 09:55:44,963 [pool-2-thread-1] ERROR velocity - VM #xdatSearchForm: error : too few arguments to macro. Wanted 2 got 0
2017-09-06 09:55:45,003 [pool-2-thread-1] ERROR velocity - VM #displayFileSystem: error : too few arguments to macro. Wanted 1 got 0
2017-09-06 09:55:45,004 [pool-2-thread-1] ERROR velocity - VM #auditBoxes: error : too few arguments to macro. Wanted 4 got 0
2017-09-06 09:56:15,479 [http-bio-9090-exec-1] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 09:56:15,519 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 09:56:15,519 [http-bio-9090-exec-1] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 09:56:15,519 [http-bio-9090-exec-1] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 09:56:15,519 [http-bio-9090-exec-1] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 09:56:15,599 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:15,599 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:15,599 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:15,599 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:15,599 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:15,599 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:33,139 [http-bio-9090-exec-2] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 09:56:33,156 [http-bio-9090-exec-2] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 09:56:33,156 [http-bio-9090-exec-2] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 09:56:33,156 [http-bio-9090-exec-2] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 09:56:33,156 [http-bio-9090-exec-2] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 09:56:33,165 [http-bio-9090-exec-2] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:33,166 [http-bio-9090-exec-2] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:33,167 [http-bio-9090-exec-2] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:33,169 [http-bio-9090-exec-2] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:33,169 [http-bio-9090-exec-2] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:33,170 [http-bio-9090-exec-2] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:41,673 [http-bio-9090-exec-6] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 09:56:41,688 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 09:56:41,688 [http-bio-9090-exec-6] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 09:56:41,688 [http-bio-9090-exec-6] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 09:56:41,688 [http-bio-9090-exec-6] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 09:56:41,697 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:41,697 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:41,697 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:41,697 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:41,697 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:56:41,697 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:30,594 [http-bio-9090-exec-1] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 09:59:30,612 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 09:59:30,612 [http-bio-9090-exec-1] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 09:59:30,612 [http-bio-9090-exec-1] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 09:59:30,612 [http-bio-9090-exec-1] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 09:59:30,622 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:30,622 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:30,622 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:30,622 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:30,623 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:30,623 [http-bio-9090-exec-1] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:56,146 [http-bio-9090-exec-4] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 09:59:56,161 [http-bio-9090-exec-4] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 09:59:56,161 [http-bio-9090-exec-4] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 09:59:56,161 [http-bio-9090-exec-4] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 09:59:56,162 [http-bio-9090-exec-4] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 09:59:56,170 [http-bio-9090-exec-4] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:56,170 [http-bio-9090-exec-4] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:56,170 [http-bio-9090-exec-4] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:56,170 [http-bio-9090-exec-4] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:56,170 [http-bio-9090-exec-4] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 09:59:56,170 [http-bio-9090-exec-4] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:01:38,752 [http-bio-9090-exec-10] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 10:01:38,769 [http-bio-9090-exec-10] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 10:01:38,769 [http-bio-9090-exec-10] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 10:01:38,769 [http-bio-9090-exec-10] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 10:01:38,769 [http-bio-9090-exec-10] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 10:01:38,777 [http-bio-9090-exec-10] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:01:38,777 [http-bio-9090-exec-10] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:01:38,777 [http-bio-9090-exec-10] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:01:38,777 [http-bio-9090-exec-10] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:01:38,777 [http-bio-9090-exec-10] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:01:38,778 [http-bio-9090-exec-10] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:04:58,228 [http-bio-9090-exec-7] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 10:04:58,244 [http-bio-9090-exec-7] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 10:04:58,244 [http-bio-9090-exec-7] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 10:04:58,244 [http-bio-9090-exec-7] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 10:04:58,244 [http-bio-9090-exec-7] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 10:04:58,253 [http-bio-9090-exec-7] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:04:58,253 [http-bio-9090-exec-7] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:04:58,253 [http-bio-9090-exec-7] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:04:58,253 [http-bio-9090-exec-7] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:04:58,253 [http-bio-9090-exec-7] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:04:58,253 [http-bio-9090-exec-7] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:05:00,123 [http-bio-9090-exec-9] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 10:05:00,138 [http-bio-9090-exec-9] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 10:05:00,138 [http-bio-9090-exec-9] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 10:05:00,138 [http-bio-9090-exec-9] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 10:05:00,138 [http-bio-9090-exec-9] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 10:05:00,146 [http-bio-9090-exec-9] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:05:00,147 [http-bio-9090-exec-9] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:05:00,147 [http-bio-9090-exec-9] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:05:00,147 [http-bio-9090-exec-9] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:05:00,147 [http-bio-9090-exec-9] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:05:00,147 [http-bio-9090-exec-9] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:09:56,081 [http-bio-9090-exec-6] ERROR velocity - Method getSingularDisplayNameForImageSession threw exception for reference $displayManager in template navigations//HeaderIncludes.vm at [34,73]
2017-09-06 10:09:56,097 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 148, column 64]
2017-09-06 10:09:56,097 [http-bio-9090-exec-6] ERROR velocity - Left side ($sessionCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 21]
2017-09-06 10:09:56,097 [http-bio-9090-exec-6] ERROR velocity - Left side ($sessionIpCount) of '>' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 167, column 44]
2017-09-06 10:09:56,097 [http-bio-9090-exec-6] ERROR velocity - Left side ($sessionCount) of '<' operation has null value. Operation not possible. navigations//DefaultTop.vm [line 214, column 22]
2017-09-06 10:09:56,105 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:09:56,105 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:09:56,105 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:09:56,105 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:09:56,105 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
2017-09-06 10:09:56,105 [http-bio-9090-exec-6] ERROR velocity - Left side ($data.getSession().getAttribute("user").getUsername()) of '==' operation has null value. If a reference, it may not be in the context. Operation not possible. navigations//DefaultTop.vm [line 4, column 76]
cat xdat.log
[org.springframework.jms.listener.DefaultMessageListenerContainer#0-1] ERROR org.nrg.xnat.archive.XNATSessionBuilder -
org.nrg.session.SessionBuilder$NoUniqueSessionException: No session found
at org.nrg.dcm.xnat.DICOMSessionBuilder.getStudyInstanceUID(DICOMSessionBuilder.java:282)
at org.nrg.dcm.xnat.DICOMSessionBuilder.<init>(DICOMSessionBuilder.java:234)
at org.nrg.dcm.xnat.DICOMSessionBuilder.<init>(DICOMSessionBuilder.java:242)
at org.nrg.dcm.xnat.DICOMSessionBuilder.<init>(DICOMSessionBuilder.java:262)
at org.nrg.xnat.archive.XNATSessionBuilder.call(XNATSessionBuilder.java:211)
at org.nrg.xnat.helpers.prearchive.PrearcDatabase$12.extSync(PrearcDatabase.java:718)
at org.nrg.xnat.helpers.prearchive.PrearcDatabase$12.extSync(PrearcDatabase.java:691)
at org.nrg.xnat.helpers.prearchive.PrearcDatabase$LockAndSync.run(PrearcDatabase.java:1241)
at org.nrg.xnat.helpers.prearchive.PrearcDatabase.buildSession(PrearcDatabase.java:691)
at org.nrg.xnat.helpers.prearchive.SessionXmlRebuilderRequestListener.onSessionXmlRebuilderRequest(SessionXmlRebuilderRequestListener.java:40)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.springframework.util.MethodInvoker.invoke(MethodInvoker.java:273)
at org.springframework.jms.listener.adapter.MessageListenerAdapter.invokeListenerMethod(MessageListenerAdapter.java:463)
at org.springframework.jms.listener.adapter.MessageListenerAdapter.onMessage(MessageListenerAdapter.java:355)
at org.springframework.jms.listener.AbstractMessageListenerContainer.doInvokeListener(AbstractMessageListenerContainer.java:535)
at org.springframework.jms.listener.AbstractMessageListenerContainer.invokeListener(AbstractMessageListenerContainer.java:495)
at org.springframework.jms.listener.AbstractMessageListenerContainer.doExecuteListener(AbstractMessageListenerContainer.java:467)
at org.springframework.jms.listener.AbstractPollingMessageListenerContainer.doReceiveAndExecute(AbstractPollingMessageListenerContainer.java:325)
at org.springframework.jms.listener.AbstractPollingMessageListenerContainer.receiveAndExecute(AbstractPollingMessageListenerContainer.java:263)
at org.springframework.jms.listener.DefaultMessageListenerContainer$AsyncMessageListenerInvoker.invokeListener(DefaultMessageListenerContainer.java:1058)
at org.springframework.jms.listener.DefaultMessageListenerContainer$AsyncMessageListenerInvoker.executeOngoingLoop(DefaultMessageListenerContainer.java:1050)
at org.springframework.jms.listener.DefaultMessageListenerContainer$AsyncMessageListenerInvoker.run(DefaultMessageListenerContainer.java:947)
at java.lang.Thread.run(Thread.java:745)
at org.apache.velocity.Template.merge(Template.java:296)
at org.apache.velocity.app.Velocity.mergeTemplate(Velocity.java:492)
at org.apache.velocity.app.Velocity.mergeTemplate(Velocity.java:461)
at org.apache.turbine.services.velocity.TurbineVelocityService.executeRequest(TurbineVelocityService.java:415)
at org.apache.turbine.services.velocity.TurbineVelocityService.handleRequest(TurbineVelocityService.java:281)
... 95 more
Could you please help?
Best,
Chen
Herrick, Rick
Try a couple things (you should shut down Tomcat before and start it back up after each of these):
First, clear the prearchive table in the database:
$ psql -c "DELETE FROM xdat_search.prearchive"
DELETE 0
When you restart Tomcat, the contents of the prearchive table will be generated from any data found in the prearchive folder. It’s possible there’s a stale entry in the table that’s messing things up.
If you’re still seeing errors afterwards, clear the prearchive table again, then clear the contents of the prearchive folder as well. You can move the files from the prearchive folder elsewhere if you want to try resending them later, but getting that data out of the prearchive folder should start you off with a clean prearchive database and hopefully fix at least the prearchive issue in the logs below.
Now, that said, I’m not sure that the prearchive is your sole problem. This is very odd:
Caused by: org.apache.velocity.exception.MethodInvocationException: Invocation of method 'getSingularDisplayNameForImageSession' in class org.nrg.xdat.display.DisplayManager threw exception class org.nrg.config.exceptions.ConfigServiceException : file size must be less than 10485760 characters.
The first thing to check is the file WEB-INF/conf/siteConfiguration.properties. The default version of that file is pretty small, only slightly larger than 2K. Check the size there to see if it’s larger than 10MB. You can also look for any files that match the pattern “*-config.properties”. The configuration service looks for those files and tries to load them as extra configuration properties.
Let me know what you find with these.
--
Rick Herrick
Sr. Programmer/Analyst
Neuroinformatics Research Group
Washington University School of Medicine
Phone: +1 (314) 273-1645
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hindex100
WEB-INF/conf$ ls -alth
total 192K
drwxr-sr-x 2 xnat xnat 4.0K Sep 6 15:57 .
drwxr-sr-x 7 xnat xnat 4.0K Sep 6 15:00 ..
-rw-r--r-- 1 xnat xnat 1.8K Sep 6 15:00 anon-script-config.xml
-rw-r--r-- 1 xnat xnat 939 Sep 6 15:00 config-services-config.xml
-rw-r--r-- 1 xnat xnat 1001 Sep 6 15:00 ehcache.xml
-rw-r--r-- 1 xnat xnat 9.0K Sep 6 15:00 log4j.properties
-rw-r--r-- 1 xnat xnat 3.3K Sep 6 15:00 mail-services-config.encrypted.sample.xml
-rw-r--r-- 1 xnat xnat 1.7K Sep 6 15:00 mail-services-config.smtps.sample.xml
-rw-r--r-- 1 xnat xnat 1.3K Sep 6 15:00 mail-services-config.xml
-rw-r--r-- 1 xnat xnat 2.4K Sep 6 15:00 orm-config.xml
-rw-r--r-- 1 xnat xnat 3.2K Sep 6 15:00 tags
-rw-r--r-- 1 xnat xnat 245 Sep 6 15:00 tip.txt
-rw-r--r-- 1 xnat xnat 26K Sep 6 15:00 TurbineResources.properties
-rw-r--r-- 1 xnat xnat 2.1K Sep 6 15:00 xnat.properties
-rw-r--r-- 1 xnat xnat 14K Sep 6 15:00 xnat-security.xml
-rw-r--r-- 1 xnat xnat 631 Sep 6 15:00 componentConfiguration.xml
-rw-r--r-- 1 xnat xnat 994 Sep 6 15:00 datasource-config.xml
-rw-r--r-- 1 xnat xnat 2.4K Sep 6 15:00 dicom-import-context.xml
-rw-r--r-- 1 xnat xnat 2.4K Sep 6 15:00 InstanceSettings.xml
-rw-r--r-- 1 xnat xnat 8.3K Sep 6 15:00 mq-context.xml
-rw-r--r-- 1 xnat xnat 795 Sep 6 15:00 prearc-config.xml
-rw-r--r-- 1 xnat xnat 3.8K Sep 6 15:00 root-spring-config.xml
-rw-r--r-- 1 xnat xnat 7.1K Sep 6 15:00 scheduler-context.xml
-rw-r--r-- 1 xnat xnat 1.6K Sep 6 15:00 services-context.xml
-rw-r--r-- 1 xnat xnat 2.4K Sep 6 15:00 siteConfiguration.properties
-rw-r--r-- 1 xnat xnat 822 Sep 6 15:00 framework-services-config.xml
-rw-r--r-- 1 xnat xnat 837 Sep 6 15:00 turbine-om.properties
-rw-r--r-- 1 xnat xnat 883 Sep 6 15:00 xnat-intake.xml
-rw-r--r-- 1 xnat xnat 626 Sep 6 15:00 roleConfiguration.xml
-rw-r--r-- 1 xnat xnat 991 Sep 6 15:00 xdat-services-config.xml
-rw-r--r-- 1 xnat xnat 1.8K Sep 6 15:00 notify-services-config.xml
-rw-r--r-- 1 xnat xnat 4.2K Sep 6 15:00 services.properties
-rw-r--r-- 1 xnat xnat 121 Sep 6 15:00 id.das
Chen
...