Pipeline misconfigured?

23 views

Skip to first unread message

anda

unread,

Jun 20, 2011, 1:14:53 PM6/20/11

to xnat_discussion

Hi

I'm getting this error message when I try to archive one session from
pre-archive. The pipeline parameters are correct.
I'm running
> more Tag
Nr1_4_0_2

/usr/local/xnat/pipeline/bin/XnatPipelineLauncher -pipeline
xnat_tools/Transfer.xml -id RRINiD_E02841 -label
DailyQC12Chn_June7_2011 -host http://63.243.143.242:8080/xnat -
supressNotification -u admin -dataType xnat:mrSessionData -project
"GrahamS_RPhan" -notify apac...@rotman-baycrest.on.ca -notify
apac...@rotman-baycrest.on.ca -parameter cachepath='/concordia/
xnat_mri/xnat_cache/GrahamS_RPhan/transfer_bk/20110607_083300/
Daily_QC2_Chn' -parameter xnat_project='GrahamS_RPhan' -parameter
notifyAdmin='1' -parameter userfullname='A.Admin' -parameter
useremail='apac...@rotman-baycrest.on.ca' -parameter
mailhost='mail.rotman-baycrest.on.ca' -parameter xnatserver='RRINiD'
-parameter session='RRINiD_E02841' -parameter sourceDir='/concordia/
xnat_mri/xnat_prearchive/GrahamS_RPhan/20110607_083300/
Daily_QC12_Chn' -parameter destinationDir='/concordia/xnat_mri/
xnat_archive/GrahamS_RPhan/arc001/DailyQC12Chn_June7_2011/' -
parameter sessionType='xnat:mrSessionData' -parameter logDir='/
concordia/xnat_mri/xnat_cache/logs/transfer' -parameter
adminemail='apac...@rotman-baycrest.on.ca' -parameter
sessionLabel='DailyQC12Chn_June7_2011' -pwd '********'

Param Value Pair host=http://63.243.143.242:8080/xnat/
Param Value Pair u=admin
Param Value Pair cachepath=/concordia/xnat_mri/xnat_cache/
GrahamS_RPhan/transfer_bk/20110607_083300/Daily_QC2_Chn
Param Value Pair xnat_project=GrahamS_RPhan
Param Value Pair notifyAdmin=1
Param Value Pair userfullname=A.Admin
Param Value Pair useremail=apac...@rotman-baycrest.on.ca
Param Value Pair mailhost=mail.rotman-baycrest.on.ca
Param Value Pair xnatserver=RRINiD
Param Value Pair session=RRINiD_E02841
Param Value Pair sourceDir=/concordia/xnat_mri/xnat_prearchive/
GrahamS_RPhan/20110607_083300/Daily_QC12_Chn
Param Value Pair destinationDir=/concordia/xnat_mri/xnat_archive/
GrahamS_RPhan/arc001/DailyQC12Chn_June7_2011/
Param Value Pair sessionType=xnat:mrSessionData
Param Value Pair logDir=/concordia/xnat_mri/xnat_cache/logs/transfer
Param Value Pair adminemail=apac...@rotman-baycrest.on.ca
Param Value Pair sessionLabel=DailyQC12Chn_June7_2011
Param Value Pair pwd=********
Logging to File /usr/local/xnat/pipeline/logs/
pipeline_2011_06_20_12_39_02.log

AxisFault
faultCode: {http://schemas.xmlsoap.org/soap/envelope/}
Server.userException
faultSubcode:
faultString: java.net.ConnectException: Connection timed out
faultActor:
faultNode:
faultDetail:
{http://xml.apache.org/axis/}
stackTrace:java.net.ConnectException: Connection timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:
333)
at
java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
at java.net.Socket.connect(Socket.java:519)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:
25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
153)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
120)
at
org.apache.axis.transport.http.HTTPSender.getSocket(HTTPSender.java:
191)
at
org.apache.axis.transport.http.HTTPSender.writeToSocket(HTTPSender.java:
404)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:138)
at
org.apache.axis.strategies.InvocationStrategy.visit(InvocationStrategy.java:
32)
at org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:
118)
at org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
at org.apache.axis.client.AxisClient.invoke(AxisClient.java:
165)
at org.apache.axis.client.Call.invokeEngine(Call.java:2784)
at org.apache.axis.client.Call.invoke(Call.java:2767)
at org.apache.axis.client.Call.invoke(Call.java:2443)
at org.apache.axis.client.Call.invoke(Call.java:2366)
at org.apache.axis.client.Call.invoke(Call.java:1812)
at
org.nrg.xnattools.xml.AbsService.createServiceSession(AbsService.java:
100)
at org.nrg.xnattools.xml.XMLSearch.searchAll(XMLSearch.java:
97)
at
org.nrg.pipeline.client.XNATPipelineLauncher.isPipelineQueuedOrAwaitingOrOnHold(XNATPipelineLauncher.java:
120)
at
org.nrg.pipeline.client.XNATPipelineLauncher.launch(XNATPipelineLauncher.java:
45)
at
org.nrg.pipeline.client.XNATPipelineLauncher.main(XNATPipelineLauncher.java:
264)

{http://xml.apache.org/axis/}hostname:haumea.rotman-
baycrest.on.ca

java.net.ConnectException: Connection timed out
at org.apache.axis.AxisFault.makeFault(AxisFault.java:101)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:154)
at
org.apache.axis.strategies.InvocationStrategy.visit(InvocationStrategy.java:
32)
at org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:
118)
at org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
at org.apache.axis.client.AxisClient.invoke(AxisClient.java:
165)
at org.apache.axis.client.Call.invokeEngine(Call.java:2784)
at org.apache.axis.client.Call.invoke(Call.java:2767)
at org.apache.axis.client.Call.invoke(Call.java:2443)
at org.apache.axis.client.Call.invoke(Call.java:2366)
at org.apache.axis.client.Call.invoke(Call.java:1812)
at
org.nrg.xnattools.xml.AbsService.createServiceSession(AbsService.java:
100)
at org.nrg.xnattools.xml.XMLSearch.searchAll(XMLSearch.java:
97)
at
org.nrg.pipeline.client.XNATPipelineLauncher.isPipelineQueuedOrAwaitingOrOnHold(XNATPipelineLauncher.java:
120)
at
org.nrg.pipeline.client.XNATPipelineLauncher.launch(XNATPipelineLauncher.java:
45)
at
org.nrg.pipeline.client.XNATPipelineLauncher.main(XNATPipelineLauncher.java:
264)
Caused by: java.net.ConnectException: Connection timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:
333)
at
java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
at java.net.Socket.connect(Socket.java:519)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:
25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
153)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
120)
at
org.apache.axis.transport.http.HTTPSender.getSocket(HTTPSender.java:
191)
at
org.apache.axis.transport.http.HTTPSender.writeToSocket(HTTPSender.java:
404)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:138)
... 14 more
Couldnt connect to host http://63.243.143.242:8080/xnat/

AxisFault
faultCode: {http://schemas.xmlsoap.org/soap/envelope/}
Server.userException
faultSubcode:
faultString: java.net.ConnectException: Connection timed out
faultActor:
faultNode:
faultDetail:
{http://xml.apache.org/axis/}
stackTrace:java.net.ConnectException: Connection timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:
333)
at
java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
at java.net.Socket.connect(Socket.java:519)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:
25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
153)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
120)
at
org.apache.axis.transport.http.HTTPSender.getSocket(HTTPSender.java:
191)
at
org.apache.axis.transport.http.HTTPSender.writeToSocket(HTTPSender.java:
404)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:138)
at
org.apache.axis.strategies.InvocationStrategy.visit(InvocationStrategy.java:
32)
at org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:
118)
at org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
at org.apache.axis.client.AxisClient.invoke(AxisClient.java:
165)
at org.apache.axis.client.Call.invokeEngine(Call.java:2784)
at org.apache.axis.client.Call.invoke(Call.java:2767)
at org.apache.axis.client.Call.invoke(Call.java:2443)
at org.apache.axis.client.Call.invoke(Call.java:2366)
at org.apache.axis.client.Call.invoke(Call.java:1812)
at
org.nrg.xnattools.xml.AbsService.createServiceSession(AbsService.java:
100)
at org.nrg.xnattools.xml.XMLStore.store(XMLStore.java:33)
at org.nrg.xnattools.xml.XMLStore.store(XMLStore.java:59)
at
org.nrg.pipeline.client.XNATPipelineLauncher.update(XNATPipelineLauncher.java:
181)
at java.util.Observable.notifyObservers(Observable.java:142)
at
org.nrg.pipeline.manager.EventManager.notify(EventManager.java:35)
at
org.nrg.pipeline.utils.AdminUtils.fireNotification(AdminUtils.java:44)
at
org.nrg.pipeline.manager.ExecutionManager.execute(ExecutionManager.java:
80)
at org.nrg.pipeline.task.StepManager.execute(StepManager.java:
166)
at
org.nrg.pipeline.manager.PipelineManager.launchPipeline(PipelineManager.java:
213)
at
org.nrg.pipeline.manager.PipelineManager.launchPipeline(PipelineManager.java:
193)
at
org.nrg.pipeline.client.XNATPipelineLauncher.launch(XNATPipelineLauncher.java:
47)
at
org.nrg.pipeline.client.XNATPipelineLauncher.main(XNATPipelineLauncher.java:
264)

{http://xml.apache.org/axis/}hostname:haumea.rotman-
baycrest.on.ca

java.net.ConnectException: Connection timed out
at org.apache.axis.AxisFault.makeFault(AxisFault.java:101)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:154)
at
org.apache.axis.strategies.InvocationStrategy.visit(InvocationStrategy.java:
32)
at org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:
118)
at org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
at org.apache.axis.client.AxisClient.invoke(AxisClient.java:
165)
at org.apache.axis.client.Call.invokeEngine(Call.java:2784)
at org.apache.axis.client.Call.invoke(Call.java:2767)
at org.apache.axis.client.Call.invoke(Call.java:2443)
at org.apache.axis.client.Call.invoke(Call.java:2366)
at org.apache.axis.client.Call.invoke(Call.java:1812)
at
org.nrg.xnattools.xml.AbsService.createServiceSession(AbsService.java:
100)
at org.nrg.xnattools.xml.XMLStore.store(XMLStore.java:33)
at org.nrg.xnattools.xml.XMLStore.store(XMLStore.java:59)
at
org.nrg.pipeline.client.XNATPipelineLauncher.update(XNATPipelineLauncher.java:
181)
at java.util.Observable.notifyObservers(Observable.java:142)
at
org.nrg.pipeline.manager.EventManager.notify(EventManager.java:35)
at
org.nrg.pipeline.utils.AdminUtils.fireNotification(AdminUtils.java:44)
at
org.nrg.pipeline.manager.ExecutionManager.execute(ExecutionManager.java:
80)
at org.nrg.pipeline.task.StepManager.execute(StepManager.java:
166)
at
org.nrg.pipeline.manager.PipelineManager.launchPipeline(PipelineManager.java:
213)
at
org.nrg.pipeline.manager.PipelineManager.launchPipeline(PipelineManager.java:
193)
at
org.nrg.pipeline.client.XNATPipelineLauncher.launch(XNATPipelineLauncher.java:
47)
at
org.nrg.pipeline.client.XNATPipelineLauncher.main(XNATPipelineLauncher.java:
264)
Caused by: java.net.ConnectException: Connection timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:
333)
at
java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
at java.net.Socket.connect(Socket.java:519)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:
25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
153)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
120)
at
org.apache.axis.transport.http.HTTPSender.getSocket(HTTPSender.java:
191)
at
org.apache.axis.transport.http.HTTPSender.writeToSocket(HTTPSender.java:
404)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:138)
... 22 more
Unable to store workflow with http://63.243.143.242:8080/xnat/
AxisFault
faultCode: {http://schemas.xmlsoap.org/soap/envelope/}
Server.userException
faultSubcode:
faultString: java.net.ConnectException: Connection timed out
faultActor:
faultNode:
faultDetail:
{http://xml.apache.org/axis/}
stackTrace:java.net.ConnectException: Connection timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:
333)
at
java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
at java.net.Socket.connect(Socket.java:519)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:
25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
153)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
120)
at
org.apache.axis.transport.http.HTTPSender.getSocket(HTTPSender.java:
191)
at
org.apache.axis.transport.http.HTTPSender.writeToSocket(HTTPSender.java:
404)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:138)
at
org.apache.axis.strategies.InvocationStrategy.visit(InvocationStrategy.java:
32)
at org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:
118)
at org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
at org.apache.axis.client.AxisClient.invoke(AxisClient.java:
165)
at org.apache.axis.client.Call.invokeEngine(Call.java:2784)
at org.apache.axis.client.Call.invoke(Call.java:2767)
at org.apache.axis.client.Call.invoke(Call.java:2443)
at org.apache.axis.client.Call.invoke(Call.java:2366)
at org.apache.axis.client.Call.invoke(Call.java:1812)
at
org.nrg.xnattools.xml.AbsService.createServiceSession(AbsService.java:
100)
at org.nrg.xnattools.xml.XMLStore.store(XMLStore.java:33)
at org.nrg.xnattools.xml.XMLStore.store(XMLStore.java:59)
at
org.nrg.pipeline.client.XNATPipelineLauncher.update(XNATPipelineLauncher.java:
181)
at java.util.Observable.notifyObservers(Observable.java:142)
at
org.nrg.pipeline.manager.EventManager.notify(EventManager.java:35)
at
org.nrg.pipeline.utils.AdminUtils.fireNotification(AdminUtils.java:44)
at
org.nrg.pipeline.manager.ExecutionManager.execute(ExecutionManager.java:
80)
at org.nrg.pipeline.task.StepManager.execute(StepManager.java:
166)
at
org.nrg.pipeline.manager.PipelineManager.launchPipeline(PipelineManager.java:
213)
at
org.nrg.pipeline.manager.PipelineManager.launchPipeline(PipelineManager.java:
193)
at
org.nrg.pipeline.client.XNATPipelineLauncher.launch(XNATPipelineLauncher.java:
47)
at
org.nrg.pipeline.client.XNATPipelineLauncher.main(XNATPipelineLauncher.java:
264)

{http://xml.apache.org/axis/}hostname:haumea.rotman-
baycrest.on.ca

java.net.ConnectException: Connection timed out
at org.apache.axis.AxisFault.makeFault(AxisFault.java:101)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:154)
at
org.apache.axis.strategies.InvocationStrategy.visit(InvocationStrategy.java:
32)
at org.apache.axis.SimpleChain.doVisiting(SimpleChain.java:
118)
at org.apache.axis.SimpleChain.invoke(SimpleChain.java:83)
at org.apache.axis.client.AxisClient.invoke(AxisClient.java:
165)
at org.apache.axis.client.Call.invokeEngine(Call.java:2784)
at org.apache.axis.client.Call.invoke(Call.java:2767)
at org.apache.axis.client.Call.invoke(Call.java:2443)
at org.apache.axis.client.Call.invoke(Call.java:2366)
at org.apache.axis.client.Call.invoke(Call.java:1812)
at
org.nrg.xnattools.xml.AbsService.createServiceSession(AbsService.java:
100)
at org.nrg.xnattools.xml.XMLStore.store(XMLStore.java:33)
at org.nrg.xnattools.xml.XMLStore.store(XMLStore.java:59)
at
org.nrg.pipeline.client.XNATPipelineLauncher.update(XNATPipelineLauncher.java:
181)
at java.util.Observable.notifyObservers(Observable.java:142)
at
org.nrg.pipeline.manager.EventManager.notify(EventManager.java:35)
at
org.nrg.pipeline.utils.AdminUtils.fireNotification(AdminUtils.java:44)
at
org.nrg.pipeline.manager.ExecutionManager.execute(ExecutionManager.java:
80)
at org.nrg.pipeline.task.StepManager.execute(StepManager.java:
166)
at
org.nrg.pipeline.manager.PipelineManager.launchPipeline(PipelineManager.java:
213)
at
org.nrg.pipeline.manager.PipelineManager.launchPipeline(PipelineManager.java:
193)
at
org.nrg.pipeline.client.XNATPipelineLauncher.launch(XNATPipelineLauncher.java:
47)
at
org.nrg.pipeline.client.XNATPipelineLauncher.main(XNATPipelineLauncher.java:
264)
Caused by: java.net.ConnectException: Connection timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:
333)
at
java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
at java.net.Socket.connect(Socket.java:519)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
39)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:
25)
at java.lang.reflect.Method.invoke(Method.java:597)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
153)
at
org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFactory.java:
120)
at
org.apache.axis.transport.http.HTTPSender.getSocket(HTTPSender.java:
191)
at
org.apache.axis.transport.http.HTTPSender.writeToSocket(HTTPSender.java:
404)
at
org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:138)
... 22 more
Unable to store workflow with http://63.243.143.242:8080/xnat/
Unable to store workflow entry. Host http://63.243.143.242:8080/xnat/
may not be accessible?

Thank you
Anda

Mohana Ramaratnam

unread,

Jun 20, 2011, 1:20:46 PM6/20/11

to xnat_di...@googlegroups.com

Hi Anda,

Is the XNAT site at http://63.243.143.242:8080/xnat running and
accessible from the Tomcat host (try wget
http://63.243.143.242:8080/xnat from the tomcat host machine and see
if you get index.html with appropriate content)?

Mohana

> --
> You received this message because you are subscribed to the Google Groups "xnat_discussion" group.
> To post to this group, send email to xnat_di...@googlegroups.com.
> To unsubscribe from this group, send email to xnat_discussi...@googlegroups.com.
> For more options, visit this group at http://groups.google.com/group/xnat_discussion?hl=en.
>
>

anda

unread,

Jun 20, 2011, 1:36:08 PM6/20/11

to xnat_discussion

HI Mohana,

Yes - I can store using the interface subjects, view old data etc.

The story is that imaging data has been moved to another larger server
partition.
I have rebuilt the xnat instance 1.4 to point to the new partition and
changed records in the database accordingly.

Imaging data is accessible for browsing

wget http://63.243.143.242:8080/xnat
--13:22:58-- http://63.243.143.242:8080/xnat
=> `xnat'
Connecting to 63.243.143.242:8080... failed: Connection timed out.
Retrying.

--13:26:08-- http://63.243.143.242:8080/xnat
(try: 2) => `xnat'
Connecting to 63.243.143.242:8080... failed: Connection timed out.
Retrying.

???

However I am able to access the xnat web interface ...

Thank you
Anda

On Jun 20, 1:20 pm, Mohana Ramaratnam <mohanakann...@gmail.com> wrote:
> Hi Anda,
>

> Is the XNAT site athttp://63.243.143.242:8080/xnatrunning and
> accessible from the Tomcat host (try wgethttp://63.243.143.242:8080/xnatfrom the tomcat host machine and see

> if you get index.html with appropriate content)?
>
> Mohana
>
>
>
>
>
>
>
> On Mon, Jun 20, 2011 at 10:44 PM, anda <apacu...@rotman-baycrest.on.ca> wrote:
> > Hi
>
> > I'm getting this error message when I try to archive one session from
> > pre-archive. The pipeline parameters are correct.
> > I'm running
> >> more Tag
> > Nr1_4_0_2
>
> > /usr/local/xnat/pipeline/bin/XnatPipelineLauncher -pipeline
> > xnat_tools/Transfer.xml -id RRINiD_E02841 -label
> > DailyQC12Chn_June7_2011 -hosthttp://63.243.143.242:8080/xnat-
> > supressNotification -u admin -dataType xnat:mrSessionData -project

> > "GrahamS_RPhan" -notify apacu...@rotman-baycrest.on.ca -notify
> > apacu...@rotman-baycrest.on.ca -parameter cachepath='/concordia/

> > xnat_mri/xnat_cache/GrahamS_RPhan/transfer_bk/20110607_083300/
> > Daily_QC2_Chn' -parameter xnat_project='GrahamS_RPhan' -parameter
> > notifyAdmin='1' -parameter userfullname='A.Admin' -parameter

> > useremail='apacu...@rotman-baycrest.on.ca' -parameter

> > mailhost='mail.rotman-baycrest.on.ca' -parameter xnatserver='RRINiD'
> > -parameter session='RRINiD_E02841' -parameter sourceDir='/concordia/
> > xnat_mri/xnat_prearchive/GrahamS_RPhan/20110607_083300/
> > Daily_QC12_Chn' -parameter destinationDir='/concordia/xnat_mri/
> > xnat_archive/GrahamS_RPhan/arc001/DailyQC12Chn_June7_2011/' -
> > parameter sessionType='xnat:mrSessionData' -parameter logDir='/
> > concordia/xnat_mri/xnat_cache/logs/transfer' -parameter

> > adminemail='apacu...@rotman-baycrest.on.ca' -parameter

> > sessionLabel='DailyQC12Chn_June7_2011' -pwd '********'
>
> > Param Value Pair host=http://63.243.143.242:8080/xnat/
> > Param Value Pair u=admin
> > Param Value Pair cachepath=/concordia/xnat_mri/xnat_cache/
> > GrahamS_RPhan/transfer_bk/20110607_083300/Daily_QC2_Chn
> > Param Value Pair xnat_project=GrahamS_RPhan
> > Param Value Pair notifyAdmin=1
> > Param Value Pair userfullname=A.Admin

> > Param Value Pair useremail=apacu...@rotman-baycrest.on.ca

> > Param Value Pair mailhost=mail.rotman-baycrest.on.ca
> > Param Value Pair xnatserver=RRINiD
> > Param Value Pair session=RRINiD_E02841
> > Param Value Pair sourceDir=/concordia/xnat_mri/xnat_prearchive/
> > GrahamS_RPhan/20110607_083300/Daily_QC12_Chn
> > Param Value Pair destinationDir=/concordia/xnat_mri/xnat_archive/
> > GrahamS_RPhan/arc001/DailyQC12Chn_June7_2011/
> > Param Value Pair sessionType=xnat:mrSessionData
> > Param Value Pair logDir=/concordia/xnat_mri/xnat_cache/logs/transfer

> > Param Value Pair adminemail=apacu...@rotman-baycrest.on.ca

> > 120)
> > at
> > org.apache.axis.transport.http.HTTPSender.getSocket(HTTPSender.java:
> > 191)
> > at
> > org.apache.axis.transport.http.HTTPSender.writeToSocket(HTTPSender.java:
> > 404)
> > at
> > org.apache.axis.transport.http.HTTPSender.invoke(HTTPSender.java:138)
> > ... 14 more

> > Couldnt connect to hosthttp://63.243.143.242:8080/xnat/

>
> > AxisFault
> > faultCode: {http://schemas.xmlsoap.org/soap/envelope/}
> > Server.userException
> > faultSubcode:
> > faultString: java.net.ConnectException: Connection timed out
> > faultActor:
> > faultNode:
> > faultDetail:
> > {http://xml.apache.org/axis/}
> > stackTrace:java.net.ConnectException: Connection timed out
> > at java.net.PlainSocketImpl.socketConnect(Native Method)
> > at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:
> > 333)
> > at
> > java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
> > at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
> > at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
> > at java.net.Socket.connect(Socket.java:519)
> > at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> > at
> > sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:
> > 39)
> > at
> > sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImp l.java:

> > 25)
> > at java.lang.reflect.Method.invoke(Method.java:597)
> > at
> > org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFac tory.java:
> > 153)
> > at
> > org.apache.axis.components.net.DefaultSocketFactory.create(DefaultSocketFac tory.java:
> > 120)
> > at
>