Error install Pipeline 1.7.4.

alvaro....@gmail.com

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Jan 16, 2018, 12:58:27 PM1/16/18

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Hello,

I'm trying to install the XNAT Pipeline 1.7.4 and get the following time-out error:

./gradlew
Downloading https://services.gradle.org/distributions/gradle-4.1-all.zip

Exception in thread "main" java.net.ConnectException: Connection timed out
        at java.net.PlainSocketImpl.socketConnect(Native Method)
        at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:339)
        at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:200)
        at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:182)
        at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
        at java.net.Socket.connect(Socket.java:579)
        at sun.security.ssl.SSLSocketImpl.connect(SSLSocketImpl.java:625)
        at sun.security.ssl.BaseSSLSocketImpl.connect(BaseSSLSocketImpl.java:160)
        at sun.net.NetworkClient.doConnect(NetworkClient.java:180)
        at sun.net.www.http.HttpClient.openServer(HttpClient.java:432)
        at sun.net.www.http.HttpClient.openServer(HttpClient.java:527)
        at sun.net.www.protocol.https.HttpsClient.<init>(HttpsClient.java:264)
        at sun.net.www.protocol.https.HttpsClient.New(HttpsClient.java:367)
        at sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.getNewHttpClient(AbstractDelegateHttpsURLConnection.java:191)
        at sun.net.www.protocol.http.HttpURLConnection.plainConnect(HttpURLConnection.java:933)
        at sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.connect(AbstractDelegateHttpsURLConnection.java:177)
        at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1301)
        at sun.net.www.protocol.https.HttpsURLConnectionImpl.getInputStream(HttpsURLConnectionImpl.java:254)
        at org.gradle.wrapper.Download.downloadInternal(Download.java:66)
        at org.gradle.wrapper.Download.download(Download.java:51)
        at org.gradle.wrapper.Install$1.call(Install.java:62)
        at org.gradle.wrapper.Install$1.call(Install.java:48)
        at org.gradle.wrapper.ExclusiveFileAccessManager.access(ExclusiveFileAccessManager.java:69)
        at org.gradle.wrapper.Install.createDist(Install.java:48)
        at org.gradle.wrapper.WrapperExecutor.execute(WrapperExecutor.java:107)
        at org.gradle.wrapper.GradleWrapperMain.main(GradleWrapperMain.java:61)

has anyone a hint where to check?

Thanks
Alvaro

Bogdan Mitrea

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Jan 18, 2018, 11:23:11 AM1/18/18

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Make sure you have internet access and that access to the gradle website is not blocked by a firewall.

Herrick, Rick

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Jan 18, 2018, 11:36:33 AM1/18/18

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If you don’t have internet access on the machine where you’re installing the pipeline engine, you can download that zip file directly on another machine then transfer it over. You then need to move or copy the gradle-4.1-all.zip file into the folder:

~/.gradle/wrapper/dists/gradle-4.1-all/bzyivzo6n839fup2jbap0tjew

That ~ should be the home folder for the user installing the pipeline. This is usually the XNAT user, but it’s fine if not: you just need to make sure that, once the pipeline engine is installed, you set the permissions so that the XNAT user can access the pipeline engine and write to files there. The easiest (and best) way is just to make the XNAT user the owner of the pipeline engine folder, e.g.:

$ chown -R xnat.xnat /data/xnat/pipeline

If you install the pipeline engine as the XNAT user, you won’t need to bother with that.

--

Rick Herrick

Sr. Programmer/Analyst

Neuroinformatics Research Group

Washington University School of Medicine

Phone: +1 (314) 273-1645

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