Build failed in Jenkins: Stan Unit Tests #1718

[mc.sta...@gmail.com]

See <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/1718/changes>

Changes:

[Daniel Lee] renamed AmbiguousVector to VectorOrScalar

[Daniel Lee] adding DoubleVectorView

[Daniel Lee] adding DoubleVectorView

[Daniel Lee] updating DoubleVectorView to handle const

[Daniel Lee] updated normal and cauchy to use DoubleVectorView instead of VectorOrScalar

[Daniel Lee] removing VectorOrScalar

[Daniel Lee] changed use of promote_args in agrad/partials_vari to return_type from meta/traits

[Daniel Lee] refactoring OperandsAndPartials

[Daniel Lee] implementing more parts of OperandsAndPartials_new

[Daniel Lee] removed unused functions in partials_vari

[Daniel Lee] refactoring -- renamed OperandsAndPartials_new to OperandsAndPartials

[Bob Carpenter] fixed truncation to return -inf if variate out of range with update to manual

[guojq28] rstan: remove DOS new line characters in some files

[Daniel Lee] refactoring: calling VectorView_new instead of VectorView

[Daniel Lee] removing VectorView

[Daniel Lee] refactoring: renaming VectorView_new to VectorView

[guojq28] rstan: support test_grad mode

[Daniel Lee] refactored all vectorized probs implemented so far

[Daniel Lee] splitting function signatures test again

[Daniel Lee] just changed a line to see if Jenkins will pick up the change

[Daniel Lee] added braces to bernoulli

[Daniel Lee] moved suffixes past help targe

[guojq28] rstan: faster extract method for stanfit

[Bob Carpenter] added section to style guide on local variable scope

[Bob Carpenter] added multiply_lower_tri_self_transpose function, tests, and doc

[Daniel Lee] fixed distributions

[guojq28] a typo in doc/appendices

[bg2382] add unary tcrossprod() and crossprod() functions

[Bob Carpenter] fixed minor typos in appendices

[Bob Carpenter] added input file name to stanc command for output with patch from Jeffrey Arnold

[Bob Carpenter] fixed test for Jacobians of low_tri_self multiply

[Bob Carpenter] updated doc with user comments

[Bob Carpenter] version 1.0.2 release notes in to-do

[guojq28] rstan: fix a tiny bug

[Daniel Lee] updating web links

[Daniel Lee] updating TO-DO

[bg2382] add mdivide_left_tri<TriView>(&A) and mdivide_left_tri_low(&A)

[bg2382] inv_wishart: utilize recent functions mdivide_left_tri_low() and crossprod()

[bg2382] more tests of gradients for tcrossprod()

[bg2382] comment out \begin{abstract} and \end{abstract}

[bg2382] Revert "comment out \begin{abstract} and \end{abstract}"

[Daniel Lee] initializing uninitialized doubles in tests

[Daniel Lee] vectorized logistic

[Bob Carpenter] updated some doc for windows builds and home dir location

[Bob Carpenter] patched agrad/matrix to remove signed/unsigned comparison warning

[Daniel Lee] vectorized logistic smarter

[Daniel Lee] updated tests, function signatures, and doc for logistic_log

[Bob Carpenter] added example user-defined distribution with parameters

[Daniel Lee] vectorized lognormal

[Daniel Lee] vectorized lognormal more efficiently

[Daniel Lee] added function signatures, parser tests, and updated doc for lognormal

[Daniel Lee] vectorized pareto -- naive vectorization

[Daniel Lee] adding function signatures, updating doc, and tests for function signatures for pareto

[Daniel Lee] pareto: calculated derivatives

[Daniel Lee] vectorized pareto more efficiently

[marcus.a.brubaker] Pass variable name down in check_cov_matrix when calling check_symmetry and check_pos_def.

[marcus.a.brubaker] Print the variable names when a variable value is invalid.

[Daniel Lee] vectorized chi_square, added test framework for 2 parameters

[Daniel Lee] updating chi_square in function signatures, test, and doc

[bg2382] add stuff for highlighting changes in manual

[Bob Carpenter] fixed exception catch bug in stanc, closing issue 67

[Bob Carpenter] moved released notes into own file and updated to-do list

[Bob Carpenter] added mdivide_tri..._low functions with function sig tests and doc

[Daniel Lee] vectorized exponential, added tests, updated function signatures and doc

[Daniel Lee] updating TO-DO

[Daniel Lee] vectorized inv_chi_square, added function signatures, tests, doc

[Daniel Lee] vectorized scaled_inv_chi_square, added tests, updated function signatures, updated doc

[Daniel Lee] splitting function_signatures tests for Windows

[Daniel Lee] updated .gitignore

[guojq28] rstan: return empty stanfit object upon failure

[guojq28] doc/web: --no-same-owner for unpacking stan src using tar

[guojq28] doc/appendices, stan-src.1.m.p.tgz to stan-src-1.m.p.tgz

[Bob Carpenter] updated to-do list for new error checking

[bg2382] vectorize lsat model

[bg2382] elaborate on shape parameter for LKJ densities

[bg2382] fix lkj_corr_log when eta == 1.0 but is a parameter

[bg2382] fix indentation

------------------------------------------
[...truncated 3548 lines...]
from lib/boost_1.51.0/boost/random/linear_congruential.hpp:26,
from lib/boost_1.51.0/boost/random/additive_combine.hpp:27,
from src/stan/gm/command.hpp:13,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/integer_fwd.hpp:29:14: error: 'uintmax_t' in namespace 'Eigen::boost' does not name a type
lib/boost_1.51.0/boost/integer_fwd.hpp:30:14: error: 'intmax_t' in namespace 'Eigen::boost' does not name a type
lib/boost_1.51.0/boost/integer_fwd.hpp:31:14: error: 'uintmax_t' in namespace 'Eigen::boost' does not name a type
lib/boost_1.51.0/boost/integer_fwd.hpp:107:22: error: 'Eigen::boost::long_long_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:114:20: error: 'Eigen::boost::long_long_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:121:20: error: 'Eigen::boost::ulong_long_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:141:11: error: 'static_log2_argument_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:149:11: error: 'static_min_max_signed_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:149:46: error: 'static_min_max_signed_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:152:11: error: 'static_min_max_signed_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:152:46: error: 'static_min_max_signed_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:155:11: error: 'static_min_max_unsigned_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:155:48: error: 'static_min_max_unsigned_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:158:11: error: 'static_min_max_unsigned_type' has not been declared
lib/boost_1.51.0/boost/integer_fwd.hpp:158:48: error: 'static_min_max_unsigned_type' has not been declared
In file included from lib/boost_1.51.0/boost/random/linear_congruential.hpp:26:0,
from lib/boost_1.51.0/boost/random/additive_combine.hpp:27,
from src/stan/gm/command.hpp:13,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/integer/static_log2.hpp:44:14: error: 'static_log2_argument_type' in namespace 'Eigen::boost' does not name a type
lib/boost_1.51.0/boost/integer/static_log2.hpp:50:10: error: a function call cannot appear in a constant-expression
lib/boost_1.51.0/boost/integer/static_log2.hpp:51:10: error: in argument to unary !
lib/boost_1.51.0/boost/integer/static_log2.hpp:51:10: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer/static_log2.hpp:84:16: error: 'argument_type' has not been declared
lib/boost_1.51.0/boost/integer/static_log2.hpp:109:12: error: 'static_log2_argument_type' has not been declared
In file included from lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:17:0,
from lib/boost_1.51.0/boost/random/detail/const_mod.hpp:23,
from lib/boost_1.51.0/boost/random/linear_congruential.hpp:30,
from lib/boost_1.51.0/boost/random/additive_combine.hpp:27,
from src/stan/gm/command.hpp:13,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/integer.hpp:61:51: error: 'long_long_type' in namespace 'Eigen::boost' does not name a type
lib/boost_1.51.0/boost/integer.hpp:70:52: error: 'ulong_long_type' in namespace 'Eigen::boost' does not name a type
lib/boost_1.51.0/boost/integer.hpp:103:54: error: 'long_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:103:54: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:483:36: note: 'boost::long_long_type'
lib/boost_1.51.0/boost/integer.hpp:103:86: error: template argument 1 is invalid
In file included from lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:17:0,
from lib/boost_1.51.0/boost/random/detail/const_mod.hpp:23,
from lib/boost_1.51.0/boost/random/linear_congruential.hpp:30,
from lib/boost_1.51.0/boost/random/additive_combine.hpp:27,
from src/stan/gm/command.hpp:13,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/integer.hpp:104:56: error: 'ulong_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:104:56: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:484:45: note: 'boost::ulong_long_type'
lib/boost_1.51.0/boost/integer.hpp:104:89: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:116:7: error: 'intmax_t' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:116:7: note: suggested alternatives:
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:68:38: note: 'intmax_t'
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:68:38: note: 'intmax_t'
lib/boost_1.51.0/boost/integer.hpp:116:7: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:121:33: error: 'long_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:121:33: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:483:36: note: 'boost::long_long_type'
lib/boost_1.51.0/boost/integer.hpp:129:9: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:137:6: error: 'uintmax_t' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:137:6: note: suggested alternatives:
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:69:48: note: 'uintmax_t'
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:69:48: note: 'uintmax_t'
lib/boost_1.51.0/boost/integer.hpp:137:6: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:152:33: error: 'long_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:152:33: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:483:36: note: 'boost::long_long_type'
lib/boost_1.51.0/boost/integer.hpp:160:9: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:170:20: error: 'Eigen::boost::long_long_type' has not been declared
lib/boost_1.51.0/boost/integer.hpp:179:48: error: 'long_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:179:48: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:483:36: note: 'boost::long_long_type'
lib/boost_1.51.0/boost/integer.hpp:179:48: error: 'long_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:179:48: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:483:36: note: 'boost::long_long_type'
lib/boost_1.51.0/boost/integer.hpp:179:69: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:187:9: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:192:20: error: 'Eigen::boost::long_long_type' has not been declared
lib/boost_1.51.0/boost/integer.hpp:201:48: error: 'long_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:201:48: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:483:36: note: 'boost::long_long_type'
lib/boost_1.51.0/boost/integer.hpp:201:48: error: 'long_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:201:48: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:483:36: note: 'boost::long_long_type'
lib/boost_1.51.0/boost/integer.hpp:201:69: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:209:9: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:215:20: error: 'Eigen::boost::ulong_long_type' has not been declared
lib/boost_1.51.0/boost/integer.hpp:245:48: error: 'ulong_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:245:48: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:484:45: note: 'boost::ulong_long_type'
lib/boost_1.51.0/boost/integer.hpp:245:48: error: 'ulong_long_type' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/integer.hpp:245:48: note: suggested alternative:
lib/boost_1.51.0/boost/config/suffix.hpp:484:45: note: 'boost::ulong_long_type'
lib/boost_1.51.0/boost/integer.hpp:245:70: error: template argument 1 is invalid
lib/boost_1.51.0/boost/integer.hpp:253:9: error: template argument 1 is invalid
In file included from lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:19:0,
from lib/boost_1.51.0/boost/random/detail/const_mod.hpp:23,
from lib/boost_1.51.0/boost/random/linear_congruential.hpp:30,
from lib/boost_1.51.0/boost/random/additive_combine.hpp:27,
from src/stan/gm/command.hpp:13,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp: In function 'int Eigen::boost::random::detail::integer_log2(T)':
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp:74:9: error: 'max_pow2_less' is not a member of 'boost::detail'
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp:74:9: note: suggested alternative:
lib/boost_1.51.0/boost/pending/integer_log2.hpp:55:10: note: 'Eigen::boost::detail::max_pow2_less'
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp:74:9: error: 'max_pow2_less' is not a member of 'boost::detail'
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp:74:9: note: suggested alternative:
lib/boost_1.51.0/boost/pending/integer_log2.hpp:55:10: note: 'Eigen::boost::detail::max_pow2_less'
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp:76:9: error: wrong number of template arguments (2, should be 1)
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp:36:8: error: provided for 'template<int Shift> struct Eigen::boost::random::detail::integer_log2_impl'
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp:77:6: error: '::apply' has not been declared
lib/boost_1.51.0/boost/random/detail/integer_log2.hpp:77:6: note: suggested alternative:
lib/boost_1.51.0/boost/mpl/aux_/preprocessed/gcc/apply_fwd.hpp:18:8: note: 'boost::mpl::apply'
In file included from lib/boost_1.51.0/boost/random/detail/const_mod.hpp:23:0,
from lib/boost_1.51.0/boost/random/linear_congruential.hpp:30,
from lib/boost_1.51.0/boost/random/additive_combine.hpp:27,
from src/stan/gm/command.hpp:13,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp: At global scope:
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:28:5: error: 'uintmax_t' in namespace 'Eigen::boost' does not name a type
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:29:5: error: 'uintmax_t' in namespace 'Eigen::boost' does not name a type
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:32:31: error: 'Eigen::boost::random::detail::muldivmod' declared as an 'inline' variable
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:32:24: error: 'uintmax_t' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:32:24: note: suggested alternatives:
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:69:48: note: 'uintmax_t'
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:69:48: note: 'uintmax_t'
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:32:44: error: 'uintmax_t' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:32:44: note: suggested alternatives:
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:69:48: note: 'uintmax_t'
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:69:48: note: 'uintmax_t'
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:32:64: error: 'uintmax_t' is not a member of 'Eigen::boost'
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:32:64: note: suggested alternatives:
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:69:48: note: 'uintmax_t'
c:\rtools\gcc-4.6.3\bin\../lib/gcc/i686-w64-mingw32/4.6.3/../../../../i686-w64-mingw32/include/stdint.h:69:48: note: 'uintmax_t'
lib/boost_1.51.0/boost/random/detail/large_arithmetic.hpp:33:1: error: expected ',' or ';' before '{' token
In file included from src/stan/prob/distributions/multivariate/discrete.hpp:5:0,
from src/stan/prob/distributions/multivariate.hpp:5,
from src/stan/prob/distributions.hpp:5,
from src/stan/model/model_header.hpp:31:
src/stan/prob/distributions/multivariate/discrete/multinomial.hpp:82:1: error: expected '}' at end of input
src/stan/prob/distributions/multivariate/discrete/multinomial.hpp:82:1: error: expected '}' at end of input
src/stan/prob/distributions/multivariate/discrete/multinomial.hpp:82:1: error: expected '}' at end of input
src/stan/prob/distributions/multivariate/discrete/multinomial.hpp:82:1: error: expected '}' at end of input
In file included from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_config.hpp:16:0,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_system.hpp:13,
from lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:12,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_types.hpp:12,
from src/stan/gm/command.hpp:7,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/date_time/time_duration.hpp: In constructor 'Eigen::boost::date_time::time_duration<T, rep_type>::time_duration(Eigen::boost::date_time::special_values) [with T = Eigen::boost::posix_time::time_duration, rep_type = int]':
lib/boost_1.51.0/boost/date_time/posix_time/posix_time_config.hpp:80:66: instantiated from here
lib/boost_1.51.0/boost/date_time/time_duration.hpp:67:74: error: using invalid field 'Eigen::boost::date_time::time_duration<T, rep_type>::ticks_'
In file included from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_system.hpp:15:0,
from lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:12,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_types.hpp:12,
from src/stan/gm/command.hpp:7,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp: In static member function 'static Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type Eigen::boost::date_time::counted_time_system<time_rep>::add_days(const time_rep_type&, const date_duration_type&) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::date_duration_type = Eigen::boost::gregorian::date_duration]':
lib/boost_1.51.0/boost/date_time/time.hpp:141:45: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::time_type Eigen::boost::date_time::base_time<T, time_system>::operator+(const date_duration_type&) const [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::time_type = Eigen::boost::posix_time::ptime, Eigen::boost::date_time::base_time<T, time_system>::date_duration_type = Eigen::boost::gregorian::date_duration]'
lib/boost_1.51.0/boost/date_time/posix_time/date_duration_operators.hpp:33:37: instantiated from here
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:197:60: error: 'const time_rep_type' has no member named 'get_rep'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:200:97: error: 'frac_sec_per_day' is not a member of 'Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >::time_rep_type {aka Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>}'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:200:97: error: 'const time_rep_type' has no member named 'time_count'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp: In constructor 'Eigen::boost::date_time::counted_time_rep<config>::counted_time_rep(const date_type&, const time_duration_type&) [with config = Eigen::boost::posix_time::millisec_posix_time_system_config, Eigen::boost::date_time::counted_time_rep<config>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::counted_time_rep<config>::time_duration_type = Eigen::boost::posix_time::time_duration]':
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:138:36: instantiated from 'static Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type Eigen::boost::date_time::counted_time_system<time_rep>::get_time_rep(const date_type&, const time_duration_type&, Eigen::boost::date_time::dst_flags) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::counted_time_system<time_rep>::time_duration_type = Eigen::boost::posix_time::time_duration]'
lib/boost_1.51.0/boost/date_time/time.hpp:62:52: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::base_time(const date_type&, const time_duration_type&, Eigen::boost::date_time::dst_flags) [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::base_time<T, time_system>::time_duration_type = Eigen::boost::posix_time::time_duration]'
lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:39:107: instantiated from here
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:35:22: error: using invalid field 'Eigen::boost::date_time::counted_time_rep<config>::time_count_'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:138:36: instantiated from 'static Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type Eigen::boost::date_time::counted_time_system<time_rep>::get_time_rep(const date_type&, const time_duration_type&, Eigen::boost::date_time::dst_flags) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::counted_time_system<time_rep>::time_duration_type = Eigen::boost::posix_time::time_duration]'
lib/boost_1.51.0/boost/date_time/time.hpp:62:52: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::base_time(const date_type&, const time_duration_type&, Eigen::boost::date_time::dst_flags) [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::base_time<T, time_system>::time_duration_type = Eigen::boost::posix_time::time_duration]'
lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:39:107: instantiated from here
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:38:9: error: 'const time_duration_type' has no member named 'get_rep'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:38:9: error: using invalid field 'Eigen::boost::date_time::counted_time_rep<config>::time_count_'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:42:9: error: 'const time_duration_type' has no member named 'ticks'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:42:9: error: 'frac_sec_per_day' was not declared in this scope
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:42:9: error: using invalid field 'Eigen::boost::date_time::counted_time_rep<config>::time_count_'
In file included from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_config.hpp:16:0,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_system.hpp:13,
from lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:12,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_types.hpp:12,
from src/stan/gm/command.hpp:7,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/date_time/time_duration.hpp: In member function 'Eigen::boost::date_time::time_duration<T, rep_type>::duration_type Eigen::boost::date_time::time_duration<T, rep_type>::operator-(const duration_type&) const [with T = Eigen::boost::posix_time::time_duration, rep_type = int, Eigen::boost::date_time::time_duration<T, rep_type>::duration_type = Eigen::boost::posix_time::time_duration]':
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:154:90: instantiated from 'static Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type Eigen::boost::date_time::counted_time_system<time_rep>::get_time_rep(Eigen::boost::date_time::special_values) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>]'
lib/boost_1.51.0/boost/date_time/time.hpp:65:42: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::base_time(Eigen::boost::date_time::special_values) [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >]'
lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:49:89: instantiated from here
lib/boost_1.51.0/boost/date_time/time_duration.hpp:161:45: error: 'const duration_type' has no member named 'ticks_'
lib/boost_1.51.0/boost/date_time/time_duration.hpp:161:45: error: using invalid field 'Eigen::boost::date_time::time_duration<T, rep_type>::ticks_'
lib/boost_1.51.0/boost/date_time/time_duration.hpp: In copy constructor 'Eigen::boost::date_time::time_duration<T, rep_type>::time_duration(const Eigen::boost::date_time::time_duration<T, rep_type>&) [with T = Eigen::boost::posix_time::time_duration, rep_type = int]':
lib/boost_1.51.0/boost/date_time/posix_time/posix_time_config.hpp:57:9: instantiated from 'static Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type Eigen::boost::date_time::counted_time_system<time_rep>::get_time_rep(Eigen::boost::date_time::special_values) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>]'
lib/boost_1.51.0/boost/date_time/time.hpp:65:42: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::base_time(Eigen::boost::date_time::special_values) [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >]'
lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:49:89: instantiated from here
lib/boost_1.51.0/boost/date_time/time_duration.hpp:64:28: error: using invalid field 'Eigen::boost::date_time::time_duration<T, rep_type>::ticks_'
lib/boost_1.51.0/boost/date_time/time_duration.hpp:64:28: error: 'const class Eigen::boost::date_time::time_duration<Eigen::boost::posix_time::time_duration, int>' has no member named 'ticks_'
In file included from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_system.hpp:15:0,
from lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:12,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_types.hpp:12,
from src/stan/gm/command.hpp:7,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp: In member function 'Eigen::boost::date_time::counted_time_rep<config>::date_type Eigen::boost::date_time::counted_time_rep<config>::date() const [with config = Eigen::boost::posix_time::millisec_posix_time_system_config, Eigen::boost::date_time::counted_time_rep<config>::date_type = Eigen::boost::gregorian::date]':
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:170:23: instantiated from 'static Eigen::boost::date_time::counted_time_system<time_rep>::date_type Eigen::boost::date_time::counted_time_system<time_rep>::get_date(const time_rep_type&) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>]'
lib/boost_1.51.0/boost/date_time/time.hpp:72:41: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::date_type Eigen::boost::date_time::base_time<T, time_system>::date() const [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::date_type = Eigen::boost::gregorian::date]'
lib/boost_1.51.0/boost/date_time/posix_time/date_duration_operators.hpp:33:36: instantiated from here
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:53:7: error: using invalid field 'Eigen::boost::date_time::counted_time_rep<config>::time_count_'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:54:50: error: using invalid field 'Eigen::boost::date_time::counted_time_rep<config>::time_count_'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp: In member function 'bool Eigen::boost::date_time::counted_time_rep<config>::is_special() const [with config = Eigen::boost::posix_time::millisec_posix_time_system_config]':
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:196:7: instantiated from 'static Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type Eigen::boost::date_time::counted_time_system<time_rep>::add_days(const time_rep_type&, const date_duration_type&) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::date_duration_type = Eigen::boost::gregorian::date_duration]'
lib/boost_1.51.0/boost/date_time/time.hpp:141:45: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::time_type Eigen::boost::date_time::base_time<T, time_system>::operator+(const date_duration_type&) const [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::time_type = Eigen::boost::posix_time::ptime, Eigen::boost::date_time::base_time<T, time_system>::date_duration_type = Eigen::boost::gregorian::date_duration]'
lib/boost_1.51.0/boost/date_time/posix_time/date_duration_operators.hpp:33:37: instantiated from here
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:108:37: error: using invalid field 'Eigen::boost::date_time::counted_time_rep<config>::time_count_'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp: In static member function 'static Eigen::boost::date_time::counted_time_system<time_rep>::time_duration_type Eigen::boost::date_time::counted_time_system<time_rep>::get_time_of_day(const time_rep_type&) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::time_duration_type = Eigen::boost::posix_time::time_duration, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>]':
lib/boost_1.51.0/boost/date_time/time.hpp:76:48: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::time_duration_type Eigen::boost::date_time::base_time<T, time_system>::time_of_day() const [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::time_duration_type = Eigen::boost::posix_time::time_duration]'
lib/boost_1.51.0/boost/date_time/time.hpp:145:7: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::time_type Eigen::boost::date_time::base_time<T, time_system>::operator+=(const date_duration_type&) [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::time_type = Eigen::boost::posix_time::ptime, Eigen::boost::date_time::base_time<T, time_system>::date_duration_type = Eigen::boost::gregorian::date_duration]'
lib/boost_1.51.0/boost/date_time/posix_time/date_duration_operators.hpp:44:38: instantiated from here
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:175:61: error: 'const time_rep_type' has no member named 'get_rep'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:178:50: error: 'const time_rep_type' has no member named 'tod'
In file included from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_config.hpp:16:0,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_system.hpp:13,
from lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:12,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_types.hpp:12,
from src/stan/gm/command.hpp:7,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/date_time/time_duration.hpp: In member function 'bool Eigen::boost::date_time::time_duration<T, rep_type>::is_special() const [with T = Eigen::boost::posix_time::time_duration, rep_type = int]':
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:37:7: instantiated from 'Eigen::boost::date_time::counted_time_rep<config>::counted_time_rep(const date_type&, const time_duration_type&) [with config = Eigen::boost::posix_time::millisec_posix_time_system_config, Eigen::boost::date_time::counted_time_rep<config>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::counted_time_rep<config>::time_duration_type = Eigen::boost::posix_time::time_duration]'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:138:36: instantiated from 'static Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type Eigen::boost::date_time::counted_time_system<time_rep>::get_time_rep(const date_type&, const time_duration_type&, Eigen::boost::date_time::dst_flags) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::counted_time_system<time_rep>::time_duration_type = Eigen::boost::posix_time::time_duration]'
lib/boost_1.51.0/boost/date_time/time.hpp:62:52: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::base_time(const date_type&, const time_duration_type&, Eigen::boost::date_time::dst_flags) [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::base_time<T, time_system>::time_duration_type = Eigen::boost::posix_time::time_duration]'
lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:39:107: instantiated from here
lib/boost_1.51.0/boost/date_time/time_duration.hpp:205:7: error: 'is_adapted' is not a member of 'Eigen::boost::date_time::time_duration<Eigen::boost::posix_time::time_duration, int>::traits_type {aka int}'
lib/boost_1.51.0/boost/date_time/time_duration.hpp:207:34: error: using invalid field 'Eigen::boost::date_time::time_duration<T, rep_type>::ticks_'
In file included from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_system.hpp:15:0,
from lib/boost_1.51.0/boost/date_time/posix_time/ptime.hpp:12,
from lib/boost_1.51.0/boost/date_time/posix_time/posix_time_types.hpp:12,
from src/stan/gm/command.hpp:7,
from src/stan/model/model_header.hpp:20:
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp: In member function 'long unsigned int Eigen::boost::date_time::counted_time_rep<config>::day_count() const [with config = Eigen::boost::posix_time::millisec_posix_time_system_config]':
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:57:62: instantiated from 'Eigen::boost::date_time::counted_time_rep<config>::date_type Eigen::boost::date_time::counted_time_rep<config>::date() const [with config = Eigen::boost::posix_time::millisec_posix_time_system_config, Eigen::boost::date_time::counted_time_rep<config>::date_type = Eigen::boost::gregorian::date]'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:170:23: instantiated from 'static Eigen::boost::date_time::counted_time_system<time_rep>::date_type Eigen::boost::date_time::counted_time_system<time_rep>::get_date(const time_rep_type&) [with time_rep = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>, Eigen::boost::date_time::counted_time_system<time_rep>::date_type = Eigen::boost::gregorian::date, Eigen::boost::date_time::counted_time_system<time_rep>::time_rep_type = Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>]'
lib/boost_1.51.0/boost/date_time/time.hpp:72:41: instantiated from 'Eigen::boost::date_time::base_time<T, time_system>::date_type Eigen::boost::date_time::base_time<T, time_system>::date() const [with T = Eigen::boost::posix_time::ptime, time_system = Eigen::boost::date_time::counted_time_system<Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config> >, Eigen::boost::date_time::base_time<T, time_system>::date_type = Eigen::boost::gregorian::date]'
lib/boost_1.51.0/boost/date_time/posix_time/date_duration_operators.hpp:33:36: instantiated from here
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:78:103: error: 'frac_sec_per_day' was not declared in this scope
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:78:103: error: 'as_number' is not a member of 'Eigen::boost::date_time::counted_time_rep<Eigen::boost::posix_time::millisec_posix_time_system_config>::resolution_traits {aka int}'
lib/boost_1.51.0/boost/date_time/time_system_counted.hpp:78:103: error: using invalid field 'Eigen::boost::date_time::counted_time_rep<config>::time_count_'
make: *** [src/stan/model/model_header.hpp.gch] Error 1

<http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/ws/>exit> 2
Build step 'Execute Windows batch command' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Recording test results

[mc.sta...@gmail.com]

See <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/1719/>

------------------------------------------
[...truncated 3561 lines...]

[mc.sta...@gmail.com]

See <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/1720/>

------------------------------------------
Started by an SCM change
Building in workspace <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/ws/>
Checkout:workspace / <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/ws/> - hudson.remoting.LocalChannel@15ece16
Using strategy: Default
Last Built Revision: Revision 1a759cf27228b894b6d61cde3266e513d47a5c4a (origin/mixed_type)
ERROR: Workspace has a .git repository, but it appears to be corrupt.
hudson.plugins.git.GitException: Command "git.exe rev-parse --verify HEAD" returned status code 128:
stdout:
stderr: fatal: Not a git repository (or any of the parent directories): .git

at hudson.plugins.git.GitAPI.launchCommandIn(GitAPI.java:863)
at hudson.plugins.git.GitAPI.launchCommand(GitAPI.java:824)
at hudson.plugins.git.GitAPI.launchCommand(GitAPI.java:834)
at hudson.plugins.git.GitAPI.validateRevision(GitAPI.java:324)
at hudson.plugins.git.GitAPI.hasGitRepo(GitAPI.java:123)
at hudson.plugins.git.GitSCM$2.invoke(GitSCM.java:1063)
at hudson.plugins.git.GitSCM$2.invoke(GitSCM.java:1044)
at hudson.FilePath.act(FilePath.java:852)
at hudson.FilePath.act(FilePath.java:825)
at hudson.plugins.git.GitSCM.determineRevisionToBuild(GitSCM.java:1044)
at hudson.plugins.git.GitSCM.checkout(GitSCM.java:1200)
at hudson.model.AbstractProject.checkout(AbstractProject.java:1256)
at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:589)
at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:88)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:494)
at hudson.model.Run.execute(Run.java:1502)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:46)
at hudson.model.ResourceController.execute(ResourceController.java:88)
at hudson.model.Executor.run(Executor.java:236)
Cloning the remote Git repository
Cloning repository https://code.google.com/p/stan/
git --version
git version 1.7.9.msysgit.0
ERROR: Failed to clean the workspace
java.io.IOException: Unable to delete <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/ws/.git/objects/pack/pack-719e94e94e659afe76af03a1dd7e707b1b29e7e2.pack>
at hudson.Util.deleteFile(Util.java:243)
at hudson.Util.deleteRecursive(Util.java:293)
at hudson.Util.deleteContentsRecursive(Util.java:204)
at hudson.Util.deleteRecursive(Util.java:284)
at hudson.Util.deleteContentsRecursive(Util.java:204)
at hudson.Util.deleteRecursive(Util.java:284)
at hudson.Util.deleteContentsRecursive(Util.java:204)
at hudson.Util.deleteRecursive(Util.java:284)
at hudson.Util.deleteContentsRecursive(Util.java:204)
at hudson.Util.deleteRecursive(Util.java:284)
at hudson.FilePath$11.invoke(FilePath.java:983)
at hudson.FilePath$11.invoke(FilePath.java:981)
at hudson.FilePath.act(FilePath.java:852)
at hudson.FilePath.act(FilePath.java:825)
at hudson.FilePath.deleteRecursive(FilePath.java:981)
at hudson.plugins.git.GitAPI.clone(GitAPI.java:239)
at hudson.plugins.git.GitSCM$2.invoke(GitSCM.java:1102)
at hudson.plugins.git.GitSCM$2.invoke(GitSCM.java:1044)
at hudson.FilePath.act(FilePath.java:852)
at hudson.FilePath.act(FilePath.java:825)
at hudson.plugins.git.GitSCM.determineRevisionToBuild(GitSCM.java:1044)
at hudson.plugins.git.GitSCM.checkout(GitSCM.java:1200)
at hudson.model.AbstractProject.checkout(AbstractProject.java:1256)
at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:589)
at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:88)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:494)
at hudson.model.Run.execute(Run.java:1502)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:46)
at hudson.model.ResourceController.execute(ResourceController.java:88)
at hudson.model.Executor.run(Executor.java:236)
ERROR: Error cloning remote repo 'origin' : Failed to delete workspace
hudson.plugins.git.GitException: Failed to delete workspace
at hudson.plugins.git.GitAPI.clone(GitAPI.java:242)
at hudson.plugins.git.GitSCM$2.invoke(GitSCM.java:1102)
at hudson.plugins.git.GitSCM$2.invoke(GitSCM.java:1044)
at hudson.FilePath.act(FilePath.java:852)
at hudson.FilePath.act(FilePath.java:825)
at hudson.plugins.git.GitSCM.determineRevisionToBuild(GitSCM.java:1044)
at hudson.plugins.git.GitSCM.checkout(GitSCM.java:1200)
at hudson.model.AbstractProject.checkout(AbstractProject.java:1256)
at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:589)
at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:88)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:494)
at hudson.model.Run.execute(Run.java:1502)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:46)
at hudson.model.ResourceController.execute(ResourceController.java:88)
at hudson.model.Executor.run(Executor.java:236)
Caused by: java.io.IOException: Unable to delete <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/ws/.git/objects/pack/pack-719e94e94e659afe76af03a1dd7e707b1b29e7e2.pack>
at hudson.Util.deleteFile(Util.java:243)
at hudson.Util.deleteRecursive(Util.java:293)
at hudson.Util.deleteContentsRecursive(Util.java:204)
at hudson.Util.deleteRecursive(Util.java:284)
at hudson.Util.deleteContentsRecursive(Util.java:204)
at hudson.Util.deleteRecursive(Util.java:284)
at hudson.Util.deleteContentsRecursive(Util.java:204)
at hudson.Util.deleteRecursive(Util.java:284)
at hudson.Util.deleteContentsRecursive(Util.java:204)
at hudson.Util.deleteRecursive(Util.java:284)
at hudson.FilePath$11.invoke(FilePath.java:983)
at hudson.FilePath$11.invoke(FilePath.java:981)
at hudson.FilePath.act(FilePath.java:852)
at hudson.FilePath.act(FilePath.java:825)
at hudson.FilePath.deleteRecursive(FilePath.java:981)
at hudson.plugins.git.GitAPI.clone(GitAPI.java:239)
... 14 more
Trying next repository
ERROR: Could not clone repository
FATAL: Could not clone
hudson.plugins.git.GitException: Could not clone
at hudson.plugins.git.GitSCM$2.invoke(GitSCM.java:1114)
at hudson.plugins.git.GitSCM$2.invoke(GitSCM.java:1044)
at hudson.FilePath.act(FilePath.java:852)
at hudson.FilePath.act(FilePath.java:825)
at hudson.plugins.git.GitSCM.determineRevisionToBuild(GitSCM.java:1044)
at hudson.plugins.git.GitSCM.checkout(GitSCM.java:1200)
at hudson.model.AbstractProject.checkout(AbstractProject.java:1256)
at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:589)
at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:88)
at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:494)
at hudson.model.Run.execute(Run.java:1502)
at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:46)
at hudson.model.ResourceController.execute(ResourceController.java:88)
at hudson.model.Executor.run(Executor.java:236)

[mc.sta...@gmail.com]

See <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/1721/>

[mc.sta...@gmail.com]

See <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/1722/>

------------------------------------------
[...truncated 3551 lines...]

[mc.sta...@gmail.com]

See <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/1723/>

------------------------------------------
[...truncated 3548 lines...]

make: *** [bin/stan/agrad/matrix.o] Error 1
make: *** Waiting for unfinished jobs....

[mc.sta...@gmail.com]

See <http://d1m1s1b1.stat.columbia.edu:8080/job/Stan%20Unit%20Tests/1724/changes>