See <
http://d1m1s1b1.stat.columbia.edu:8080/job/CmdStan%20tests/12/changes>
Changes:
[carp] switched to arena malloc to fix #472
[carp] added stack_alloc::bytes_allocated and test
[carp] added bytes allocated test to softmax test
[Daniel Lee] getting stack_alloc to work under Windows
[Daniel Lee] Added method to inspect the size of the stack. Added test for softmax checking that all elements were allocated to the correct stack.
[carp] changed name from cur_size to bytes_requested in stack_alloc
[Daniel Lee] adding a test that could be used for speed tests
[carp] fixed leak on log_softmax, added brittle test; added code doc to softmax test
[carp] got rid of extraneous print in log_softmax test
[carp] updated multinomial, fixes #499
[Daniel Lee] disabling vol3/camel and vol3/hepatitis tests
[Daniel Lee] removing bytes_allocated function from stack_alloc. The functions that were leaking have already been patched.
[Daniel Lee] moving test
[Daniel Lee] disabling bugs_examples/vol1/seeds test
------------------------------------------
[...truncated 2914 lines...]
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[ OK ] Models_BugsExamples_Vol2_Simt4/Model_Test_Fixture/0.RunModel (39369 ms)
[ RUN ] Models_BugsExamples_Vol2_Simt4/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_BugsExamples_Vol2_Simt4/Model_Test_Fixture/0.ChainsTest (106 ms)
[ RUN ] Models_BugsExamples_Vol2_Simt4/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_BugsExamples_Vol2_Simt4/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_BugsExamples_Vol2_Simt4/Model_Test_Fixture/0 (39475 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (52215 ms total)
[ PASSED ] 4 tests.
------------------------------------------------------------
test/CmdStan/models/bugs_examples/vol3/funshapes/hsquare.exe --gtest_output="xml:test/CmdStan/models/bugs_examples/vol3/funshapes/hsquare.exe.xml";
Running main() from gtest_main.cc
[==========] Running 4 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 4 tests from Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0, where TypeParam = Models_BugsExamples_Vol3_HSquare
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[ RUN ] Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0.TestGradient
[ OK ] Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0.TestGradient (0 ms)
[ RUN ] Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0.RunModel
[ OK ] Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0.RunModel (300 ms)
[ RUN ] Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0.ChainsTest (0 ms)
[ RUN ] Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_BugsExamples_Vol3_Circle/Model_Test_Fixture/0 (300 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (12614 ms total)
[ PASSED ] 4 tests.
------------------------------------------------------------
test/CmdStan/models/bugs_examples/vol3/funshapes/parallelogram.exe --gtest_output="xml:test/CmdStan/models/bugs_examples/vol3/funshapes/parallelogram.exe.xml";
Running main() from gtest_main.cc
[==========] Running 4 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 4 tests from Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0, where TypeParam = Models_BugsExamples_Vol3_Parallelagram
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[ RUN ] Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0.TestGradient
[ OK ] Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0.TestGradient (0 ms)
[ RUN ] Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0.RunModel
[ OK ] Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0.RunModel (346 ms)
[ RUN ] Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0.ChainsTest (1 ms)
[ RUN ] Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_BugsExamples_Vol3_HSquare/Model_Test_Fixture/0 (347 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (13158 ms total)
[ PASSED ] 4 tests.
------------------------------------------------------------
test/CmdStan/models/bugs_examples/vol3/funshapes/ring.exe --gtest_output="xml:test/CmdStan/models/bugs_examples/vol3/funshapes/ring.exe.xml";
Running main() from gtest_main.cc
[==========] Running 4 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 4 tests from Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0, where TypeParam = Models_BugsExamples_Vol3_Ring
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[ RUN ] Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0.TestGradient
[ OK ] Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0.TestGradient (0 ms)
[ RUN ] Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0.RunModel
[ OK ] Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0.RunModel (333 ms)
[ RUN ] Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0.ChainsTest (0 ms)
[ RUN ] Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_BugsExamples_Vol3_Parallelagram/Model_Test_Fixture/0 (333 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (12973 ms total)
[ PASSED ] 4 tests.
------------------------------------------------------------
test/CmdStan/models/bugs_examples/vol3/funshapes/squaremc.exe --gtest_output="xml:test/CmdStan/models/bugs_examples/vol3/funshapes/squaremc.exe.xml";
Running main() from gtest_main.cc
[==========] Running 4 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 4 tests from Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0, where TypeParam = Models_BugsExamples_Vol3_SquareMC
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[ RUN ] Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0.TestGradient
[ OK ] Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0.TestGradient (0 ms)
[ RUN ] Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0.RunModel
[ OK ] Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0.RunModel (327 ms)
[ RUN ] Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0.ChainsTest (1 ms)
[ RUN ] Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_BugsExamples_Vol3_Ring/Model_Test_Fixture/0 (328 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (12881 ms total)
[ PASSED ] 4 tests.
------------------------------------------------------------
test/CmdStan/models/bugs_examples/vol3/hepatitis/hepatitisME.exe --gtest_output="xml:test/CmdStan/models/bugs_examples/vol3/hepatitis/hepatitisME.exe.xml";
Running main() from gtest_main.cc
[==========] Running 0 tests from 0 test cases.
[==========] 0 tests from 0 test cases ran. (0 ms total)
[ PASSED ] 0 tests.
YOU HAVE 4 DISABLED TESTS
------------------------------------------------------------
test/CmdStan/models/bugs_examples/vol3/hepatitis/hepatitis.exe --gtest_output="xml:test/CmdStan/models/bugs_examples/vol3/hepatitis/hepatitis.exe.xml";
Running main() from gtest_main.cc
[==========] Running 0 tests from 0 test cases.
[==========] 0 tests from 0 test cases ran. (0 ms total)
[ PASSED ] 0 tests.
YOU HAVE 4 DISABLED TESTS
------------------------------------------------------------
test/CmdStan/models/command.exe --gtest_output="xml:test/CmdStan/models/command.exe.xml";
Running main() from gtest_main.cc
[==========] Running 1 test from 1 test case.
[----------] Global test environment set-up.
[----------] 1 test from ModelCommand
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[ RUN ] Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0.TestGradient
[ OK ] Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0.TestGradient (0 ms)
[ RUN ] Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0.RunModel
[ OK ] Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0.RunModel (626 ms)
[ RUN ] Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0.ChainsTest (2 ms)
[ RUN ] Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_BugsExamples_Vol3_SquareMC/Model_Test_Fixture/0 (628 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (13351 ms total)
[ PASSED ] 4 tests.
------------------------------------------------------------
test/CmdStan/models/misc/eight_schools/eight_schools.exe --gtest_output="xml:test/CmdStan/models/misc/eight_schools/eight_schools.exe.xml";
Running main() from gtest_main.cc
[==========] Running 4 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 4 tests from Models_Misc_EightSchools/Model_Test_Fixture/0, where TypeParam = Models_Misc_EightSchools
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[ RUN ] ModelCommand.check_help_options
[ OK ] ModelCommand.check_help_options (13 ms)
[----------] 1 test from ModelCommand (13 ms total)
[----------] Global test environment tear-down
[==========] 1 test from 1 test case ran. (12623 ms total)
[ PASSED ] 1 test.
------------------------------------------------------------
test/CmdStan/models/speed/logistic/logistic.exe --gtest_output="xml:test/CmdStan/models/speed/logistic/logistic.exe.xml";
Running main() from gtest_main.cc
[==========] Running 8 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 8 tests from LogisticSpeedTest
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[ RUN ] Models_Misc_EightSchools/Model_Test_Fixture/0.TestGradient
[ OK ] Models_Misc_EightSchools/Model_Test_Fixture/0.TestGradient (0 ms)
[ RUN ] Models_Misc_EightSchools/Model_Test_Fixture/0.RunModel
[ OK ] Models_Misc_EightSchools/Model_Test_Fixture/0.RunModel (958 ms)
[ RUN ] Models_Misc_EightSchools/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_Misc_EightSchools/Model_Test_Fixture/0.ChainsTest (2 ms)
[ RUN ] Models_Misc_EightSchools/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_Misc_EightSchools/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_Misc_EightSchools/Model_Test_Fixture/0 (960 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (13597 ms total)
[ PASSED ] 4 tests.
------------------------------------------------------------
test/CmdStan/models/transforms/bounded_double.exe --gtest_output="xml:test/CmdStan/models/transforms/bounded_double.exe.xml";
Running main() from gtest_main.cc
[==========] Running 4 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 4 tests from Models_Transforms_BoundedDouble/Model_Test_Fixture/0, where TypeParam = Models_Transforms_BoundedDouble
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[ RUN ] LogisticSpeedTest.Prerequisites
R scripting front-end version 3.0.2 (2013-09-25)
[ OK ] LogisticSpeedTest.Prerequisites (165 ms)
[ RUN ] LogisticSpeedTest.GenerateData
[ OK ] Models_BugsExamples_Vol3_Camel2/Model_Test_Fixture/0.RunModel (90852 ms)
[ RUN ] Models_BugsExamples_Vol3_Camel2/Model_Test_Fixture/0.ChainsTest
src/test/CmdStan/models/model_test_fixture.hpp:352: Failure
Expected: (c->split_potential_scale_reduction(param)) < (1.5), actual: 1.67875 vs 1.5
Param 5, Sigma[1,1]: split r hat > 1.5
[ FAILED ] Models_BugsExamples_Vol3_Camel2/Model_Test_Fixture/0.ChainsTest, where TypeParam = Models_BugsExamples_Vol3_Camel2 (1 ms)
[ RUN ] Models_BugsExamples_Vol3_Camel2/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_BugsExamples_Vol3_Camel2/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_BugsExamples_Vol3_Camel2/Model_Test_Fixture/0 (90854 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (103349 ms total)
[ PASSED ] 3 tests.
[ FAILED ] 1 test, listed below:
[ FAILED ] Models_BugsExamples_Vol3_Camel2/Model_Test_Fixture/0.ChainsTest, where TypeParam = Models_BugsExamples_Vol3_Camel2
1 FAILED TEST
make: *** [runtest/test/CmdStan/models/bugs_examples/vol3/camel/camel2.exe] Error 1
make: *** Waiting for unfinished jobs....
[ RUN ] Models_Transforms_BoundedDouble/Model_Test_Fixture/0.TestGradient
[ OK ] Models_Transforms_BoundedDouble/Model_Test_Fixture/0.TestGradient (0 ms)
[ RUN ] Models_Transforms_BoundedDouble/Model_Test_Fixture/0.RunModel
[ OK ] Models_Transforms_BoundedDouble/Model_Test_Fixture/0.RunModel (220 ms)
[ RUN ] Models_Transforms_BoundedDouble/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_Transforms_BoundedDouble/Model_Test_Fixture/0.ChainsTest (1 ms)
[ RUN ] Models_Transforms_BoundedDouble/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_Transforms_BoundedDouble/Model_Test_Fixture/0.ExpectedValuesTest (0 ms)
[----------] 4 tests from Models_Transforms_BoundedDouble/Model_Test_Fixture/0 (221 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (12286 ms total)
[ PASSED ] 4 tests.
[ OK ] LogisticSpeedTest.GenerateData (24013 ms)
[ RUN ] LogisticSpeedTest.Stan/0
[ OK ] LogisticSpeedTest.Stan/0 (2172 ms)
[ RUN ] LogisticSpeedTest.Stan/1
[ OK ] LogisticSpeedTest.Stan/1 (15050 ms)
[ RUN ] LogisticSpeedTest.Stan/2
[ OK ] LogisticSpeedTest.Stan/2 (58545 ms)
[ RUN ] LogisticSpeedTest.JAGS/0
[ OK ] LogisticSpeedTest.JAGS/0 (0 ms)
[ RUN ] LogisticSpeedTest.JAGS/1
[ OK ] LogisticSpeedTest.JAGS/1 (0 ms)
[ RUN ] LogisticSpeedTest.JAGS/2
[ OK ] LogisticSpeedTest.JAGS/2 (0 ms)
[----------] 8 tests from LogisticSpeedTest (99945 ms total)
[----------] Global test environment tear-down
[==========] 8 tests from 1 test case ran. (112643 ms total)
[ PASSED ] 8 tests.
[ OK ] Models_BugsExamples_Vol2_Cervix2/Model_Test_Fixture/0.RunModel (456036 ms)
[ RUN ] Models_BugsExamples_Vol2_Cervix2/Model_Test_Fixture/0.ChainsTest
[ OK ] Models_BugsExamples_Vol2_Cervix2/Model_Test_Fixture/0.ChainsTest (1 ms)
[ RUN ] Models_BugsExamples_Vol2_Cervix2/Model_Test_Fixture/0.ExpectedValuesTest
[ OK ] Models_BugsExamples_Vol2_Cervix2/Model_Test_Fixture/0.ExpectedValuesTest (5 ms)
[----------] 4 tests from Models_BugsExamples_Vol2_Cervix2/Model_Test_Fixture/0 (456042 ms total)
[----------] Global test environment tear-down
[==========] 4 tests from 1 test case ran. (469373 ms total)
[ PASSED ] 4 tests.
<
http://d1m1s1b1.stat.columbia.edu:8080/job/CmdStan%20tests/ws/>exit> 2
Build step 'Execute Windows batch command' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Recording test results