Apache versus nginx configuration: "Server lost session", "wasClean": false

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Tirthankar Chakravarty

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Jun 20, 2016, 9:32:25 AM6/20/16
to Shiny - Web Framework for R

Hello, 

I am running identical Shiny code on two servers with apache2 as the reverse proxy on one and nginx as the reverse proxy on the other. Apache2 works perfectly, but with nginx, I constantly get the "Disconnected from server" dialog, and the console tells me: 

Mon Jun 20 2016 18:45:23 GMT+0530 (India Standard Time): Connection closed. Info: {"type":"close","code":1006,"reason":"Server lost session","wasClean":false}

Here is my nginx configuration: 

user www-data;
worker_processes 4;
pid /run/nginx.pid;

events {
worker_connections 768;
        multi_accept on;
}

http {
  map $http_upgrade $connection_upgrade {
      default upgrade;
      ''      close;
    }

  server {
    listen 80;
    
    location / {
      proxy_pass http://localhost:3838;
      proxy_redirect http://localhost:3838/ $scheme://$host/;
      proxy_http_version 1.1;
      proxy_set_header Upgrade $http_upgrade;
      proxy_set_header Connection "upgrade";
      proxy_send_timeout 7d;      
      proxy_read_timeout 24d;
      proxy_connect_timeout 24d;
    }
  }
    ##
# Basic Settings
##

sendfile on;
tcp_nopush on;
tcp_nodelay on;
# keepalive_timeout 65;
# types_hash_max_size 2048;
# server_tokens off;

# server_names_hash_bucket_size 64;
# server_name_in_redirect off;

include /etc/nginx/mime.types;
default_type application/octet-stream;

##
# Logging Settings
##

access_log /var/log/nginx/access.log;
error_log /var/log/nginx/error.log;

##
# Gzip Settings
##

gzip on;
gzip_disable "msie6";

# gzip_vary on;
# gzip_proxied any;
# gzip_comp_level 6;
# gzip_buffers 16 8k;
# gzip_http_version 1.1;
# gzip_types text/plain text/css application/json application/x-javascript text/xml application/xml application/xml+rss text/javascript;

##
# nginx-naxsi config
##
# Uncomment it if you installed nginx-naxsi
##

#include /etc/nginx/naxsi_core.rules;

##
# nginx-passenger config
##
# Uncomment it if you installed nginx-passenger
##
#passenger_root /usr;
#passenger_ruby /usr/bin/ruby;

##
# Virtual Host Configs
##

include /etc/nginx/conf.d/*.conf;
# include /etc/nginx/sites-enabled/*;
}


Here is my apache2 configuration -- this is untouched from default, see the configuration file below for the changes that I have made to get apache2 to reverse proxy Shiny: 

# This is the main Apache server configuration file.  It contains the
# configuration directives that give the server its instructions.
# See http://httpd.apache.org/docs/2.4/ for detailed information about
# the directives and /usr/share/doc/apache2/README.Debian about Debian specific
# hints.
#
#
# Summary of how the Apache 2 configuration works in Debian:
# The Apache 2 web server configuration in Debian is quite different to
# upstream's suggested way to configure the web server. This is because Debian's
# default Apache2 installation attempts to make adding and removing modules,
# virtual hosts, and extra configuration directives as flexible as possible, in
# order to make automating the changes and administering the server as easy as
# possible.

# It is split into several files forming the configuration hierarchy outlined
# below, all located in the /etc/apache2/ directory:
#
# /etc/apache2/
# |-- apache2.conf
# | `--  ports.conf
# |-- mods-enabled
# | |-- *.load
# | `-- *.conf
# |-- conf-enabled
# | `-- *.conf
# `-- sites-enabled
# `-- *.conf
#
#
# * apache2.conf is the main configuration file (this file). It puts the pieces
#   together by including all remaining configuration files when starting up the
#   web server.
#
# * ports.conf is always included from the main configuration file. It is
#   supposed to determine listening ports for incoming connections which can be
#   customized anytime.
#
# * Configuration files in the mods-enabled/, conf-enabled/ and sites-enabled/
#   directories contain particular configuration snippets which manage modules,
#   global configuration fragments, or virtual host configurations,
#   respectively.
#
#   They are activated by symlinking available configuration files from their
#   respective *-available/ counterparts. These should be managed by using our
#   helpers a2enmod/a2dismod, a2ensite/a2dissite and a2enconf/a2disconf. See
#   their respective man pages for detailed information.
#
# * The binary is called apache2. Due to the use of environment variables, in
#   the default configuration, apache2 needs to be started/stopped with
#   /etc/init.d/apache2 or apache2ctl. Calling /usr/bin/apache2 directly will not
#   work with the default configuration.


# Global configuration
#

#
# ServerRoot: The top of the directory tree under which the server's
# configuration, error, and log files are kept.
#
# NOTE!  If you intend to place this on an NFS (or otherwise network)
# mounted filesystem then please read the Mutex documentation (available
# you will save yourself a lot of trouble.
#
# Do NOT add a slash at the end of the directory path.
#
#ServerRoot "/etc/apache2"

#
# The accept serialization lock file MUST BE STORED ON A LOCAL DISK.
#
Mutex file:${APACHE_LOCK_DIR} default

#
# PidFile: The file in which the server should record its process
# identification number when it starts.
# This needs to be set in /etc/apache2/envvars
#
PidFile ${APACHE_PID_FILE}

#
# Timeout: The number of seconds before receives and sends time out.
#
Timeout 300

#
# KeepAlive: Whether or not to allow persistent connections (more than
# one request per connection). Set to "Off" to deactivate.
#
KeepAlive On

#
# MaxKeepAliveRequests: The maximum number of requests to allow
# during a persistent connection. Set to 0 to allow an unlimited amount.
# We recommend you leave this number high, for maximum performance.
#
MaxKeepAliveRequests 100

#
# KeepAliveTimeout: Number of seconds to wait for the next request from the
# same client on the same connection.
#
KeepAliveTimeout 5


# These need to be set in /etc/apache2/envvars
User ${APACHE_RUN_USER}
Group ${APACHE_RUN_GROUP}

#
# HostnameLookups: Log the names of clients or just their IP addresses
# e.g., www.apache.org (on) or 204.62.129.132 (off).
# The default is off because it'd be overall better for the net if people
# had to knowingly turn this feature on, since enabling it means that
# each client request will result in AT LEAST one lookup request to the
# nameserver.
#
HostnameLookups Off

# ErrorLog: The location of the error log file.
# If you do not specify an ErrorLog directive within a <VirtualHost>
# container, error messages relating to that virtual host will be
# logged here.  If you *do* define an error logfile for a <VirtualHost>
# container, that host's errors will be logged there and not here.
#
ErrorLog ${APACHE_LOG_DIR}/error.log

#
# LogLevel: Control the severity of messages logged to the error_log.
# Available values: trace8, ..., trace1, debug, info, notice, warn,
# error, crit, alert, emerg.
# It is also possible to configure the log level for particular modules, e.g.
# "LogLevel info ssl:warn"
#
LogLevel warn

# Include module configuration:
IncludeOptional mods-enabled/*.load
IncludeOptional mods-enabled/*.conf

# Include list of ports to listen on
Include ports.conf


# Sets the default security model of the Apache2 HTTPD server. It does
# not allow access to the root filesystem outside of /usr/share and /var/www.
# The former is used by web applications packaged in Debian,
# the latter may be used for local directories served by the web server. If
# your system is serving content from a sub-directory in /srv you must allow
# access here, or in any related virtual host.
<Directory />
Options FollowSymLinks
AllowOverride None
Require all denied
</Directory>

<Directory /usr/share>
AllowOverride None
Require all granted
</Directory>

<Directory /var/www/>
Options Indexes FollowSymLinks
AllowOverride None
Require all granted
</Directory>

#<Directory /srv/>
# Options Indexes FollowSymLinks
# AllowOverride None
# Require all granted
#</Directory>




# AccessFileName: The name of the file to look for in each directory
# for additional configuration directives.  See also the AllowOverride
# directive.
#
AccessFileName .htaccess

#
# The following lines prevent .htaccess and .htpasswd files from being
# viewed by Web clients.
#
<FilesMatch "^\.ht">
Require all denied
</FilesMatch>


#
# The following directives define some format nicknames for use with
# a CustomLog directive.
#
# These deviate from the Common Log Format definitions in that they use %O
# (the actual bytes sent including headers) instead of %b (the size of the
# requested file), because the latter makes it impossible to detect partial
# requests.
#
# Note that the use of %{X-Forwarded-For}i instead of %h is not recommended.
# Use mod_remoteip instead.
#
LogFormat "%v:%p %h %l %u %t \"%r\" %>s %O \"%{Referer}i\" \"%{User-Agent}i\"" vhost_combined
LogFormat "%h %l %u %t \"%r\" %>s %O \"%{Referer}i\" \"%{User-Agent}i\"" combined
LogFormat "%h %l %u %t \"%r\" %>s %O" common
LogFormat "%{Referer}i -> %U" referer
LogFormat "%{User-agent}i" agent

# Include of directories ignores editors' and dpkg's backup files,
# see README.Debian for details.

# Include generic snippets of statements
IncludeOptional conf-enabled/*.conf

# Include the virtual host configurations:
IncludeOptional sites-enabled/*.conf

# vim: syntax=apache ts=4 sw=4 sts=4 sr noet


And here is "sites-enabled/000-default.conf" that gets called by "apache2.conf": 

<VirtualHost *:80>

  <Proxy *>
    Allow from localhost
  </Proxy>
        <Location />
                AuthType Basic
                AuthName "Restrcted Access - Authenticate"
                AuthUserFile /etc/httpd/htpasswd.users
                Require valid-user
        </Location>

  ProxyPassMatch ^/(.+)/websocket ws://localhost:3838/$1/websocket
  ProxyPass / http://localhost:3838/
  ProxyPassReverse / http://localhost:3838/
  ProxyRequests Off

</VirtualHost>

Is there any reason that nginx disconnects where apache2 works perfectly? 

Thanks,

T

Erik Westlund

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Jun 20, 2016, 9:39:18 AM6/20/16
to Tirthankar Chakravarty, Shiny - Web Framework for R
Try adjusting your keepalive timeout.  Right now it's set commented out in your config file and that shoudl default to 75 seconds.


Nginx will close out connections that are unused and this might be your issue.  Try extending 75s to 300s (5 minutes) and see if your problem persists.

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Tirthankar Chakravarty

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Jun 20, 2016, 9:53:50 AM6/20/16
to Erik Westlund, Shiny - Web Framework for R

Hi Erik, 

Thanks for your response -- that parameter was in fact included, but I was experimenting with commenting it out. In either case I get the same issue. I have also tried varying that parameter to a large value (650s). 

One observation that I have is that the connection loss appears to happen on $(document).ready() so to speak. 

T

Tirthankar Chakravarty

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Jun 20, 2016, 10:32:46 AM6/20/16
to Erik Westlund, Shiny - Web Framework for R

I was able to resolve this, based on this answer: http://stackoverflow.com/a/11875443/1414455

Had to include the line: `include  /etc/nginx/mime.types;` under `location / {`.  

So, for completeness, here is what the "nginx.conf" file looks like: 

user www-data;
worker_processes 4;
pid /run/nginx.pid;

events {
worker_connections 768;
        multi_accept on;
}

http {
  map $http_upgrade $connection_upgrade {
      default upgrade;
      ''      close;
    }

  server {
    listen 80;
    
    location / {
      include  /etc/nginx/mime.types;
      proxy_pass http://localhost:3838;
      proxy_redirect http://localhost:3838 $scheme://$host/websocket;
      proxy_http_version 1.1;
      proxy_set_header Upgrade $http_upgrade;
      proxy_set_header Connection "upgrade";
      proxy_send_timeout 7d;      
      proxy_read_timeout 24d;
      proxy_connect_timeout 24d;
    }
  }
    ##
# Basic Settings
##

sendfile on;
tcp_nopush on;
tcp_nodelay on;
    keepalive_timeout 650s;
# server_names_hash_bucket_size 64;
server_name_in_redirect on;

include /etc/nginx/mime.types;
default_type application/octet-stream;

##
# Logging Settings
##

access_log /var/log/nginx/access.log;
error_log /var/log/nginx/error.log;

##
# Gzip Settings
##

gzip on;
gzip_disable "msie6";

##
# Virtual Host Configs
##

include /etc/nginx/conf.d/*.conf;
}

HTH,

T

valenti...@gmail.com

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Jun 28, 2016, 5:26:24 AM6/28/16
to Shiny - Web Framework for R


понедельник, 20 июня 2016 г., 19:32:25 UTC+6 пользователь Tirthankar Chakravarty написал:

Hello, 

I am running identical Shiny code on two servers with apache2 as the reverse proxy on one and nginx as the reverse proxy on the other. Apache2 works perfectly, but with nginx, I constantly get the "Disconnected from server" dialog, and the console tells me: 


Hey

Can you check if your apache server are working at all with 'service httpd status' or 'service apache2 status' ?

I can't found a 'Listen' directive in your Apache config and I can't sure that your Apache instance is running on 3838 port as nginx expected.
Can you connect to the apache on that port?

Try to look here for working example.

Tirthankar Chakravarty

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Jul 1, 2016, 3:23:17 AM7/1/16
to valenti...@gmail.com, Shiny - Web Framework for R

Valentin, 

Thanks for your reply, but I am not sure that you are addressing the question that I have. For me it is an either-or scenario, where I am proxying Shiny server using either Apache or nginx as a proxy server. When I proxy using Apache (configuration as below) things work flawlessly, but when I proxy using nginx (configuration as below) things are not so smooth. 
Shiny server obviously has its own configuration, but I am using the default configuration file, which you can find here: https://github.com/rstudio/shiny-server/blob/master/config/default.config

I was looking to understand how I can make the nginx configuration functionally similar to the Apache configuration, and why I was getting the session connection lost issues. 

Hope that helps clarify, 

T

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