Well, shucks. I wasn't very patient (the frame just looked so naked, which is nice, but I wanted to take her places) so I put in my order yesterday for most everything I didn't have on hand (my day off work coincided with my post's moderation period).
Anyhow, I went with mostly standard fare with some tweaks here and there, including a few compromises based on what was available with a discount from the shop.
Cockpit: 44cm Nitto noodles, Shimano Tiagra levers, Nitto Technomic stem, and I'll be ordering V.O.'s comfy cotton tape (I really dig the feel of shellacked cotton) in red or orange
Drivetrain: Sugino X600, 46/36/26 (hoping I like this gearing) with an XT front and Deore back, and an XT 9-speed cassette in back (11-34), with Duran-Ace bar ends (I want to try indexed bar end shifting, at least once)
Wheelset: front Shimano dyno hub laced to 36h V.O. Diagonale rim, rear V.O. touring hub laced to same rim as front (the V.O. stuff here might be somewhat of a gamble, but at just over cost I'll give it a shot)
Other: Tektro R559 brakes, still deciding between MKS touring pedals or the Thin Gripsters
And my Brooks B17 Special was planted on immediately after I received the frame. Those two are in it for the long haul together...