important bug warning
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Alexandros Stamatakis
Dec 15, 2017, 5:14:12 AM12/15/17
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Dear Users,
There is a confirmed potential bug in all RAxML options evaluating the
likelihoods (branch length and model parameter optimization on fixed
trees) of a set of fixed trees.
Options:
-f g / -f G
-f h / -f H
-f n / -f N
might be affected.
Thus, for evaluating trees please use: -f e and evaluate one tree at a
time or switch to RAxML-NG https://github.com/amkozlov/raxml-ng which
will is the replacement for standard RAxML.
The support for standard RAxML will be discontinued at some point in 2018.
Alexis
--
Alexandros (Alexis) Stamatakis
Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology
www.exelixis-lab.org
There is a confirmed potential bug in all RAxML options evaluating the
likelihoods (branch length and model parameter optimization on fixed
trees) of a set of fixed trees.
Options:
-f g / -f G
-f h / -f H
-f n / -f N
might be affected.
Thus, for evaluating trees please use: -f e and evaluate one tree at a
time or switch to RAxML-NG https://github.com/amkozlov/raxml-ng which
will is the replacement for standard RAxML.
The support for standard RAxML will be discontinued at some point in 2018.
Alexis
--
Alexandros (Alexis) Stamatakis
Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology
www.exelixis-lab.org
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