Apparent error in Pthreads code for RAxML-8.1.19

[Wayne Pfeiffer]

Hi Alexis,

I tried to compile a Pthreads executable for RAxML-8.1.19, and I get the appended error in axml.c.

* Please investigate.

Thanks,  Wayne

----

[pfeiffer@comet-ln2 RAxML-8.1.19]$ make -f Makefile.PTHREADS.gcc

gcc  -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -O2  -D_USE_PTHREADS -msse    -c -o axml.o axml.c

axml.c: In function ‘allocNodex’:

axml.c:8637:105: error: expected ‘)’ before ‘;’ token

    tr->partitionData[model].ascMissingVector = (int *)rax_calloc(((size_t)(tr->mxtips + 1), sizeof(int));

                                                                                                         ^

axml.c:8637:55: error: too few arguments to function ‘rax_calloc’

    tr->partitionData[model].ascMissingVector = (int *)rax_calloc(((size_t)(tr->mxtips + 1), sizeof(int));

                                                       ^

In file included from axml.c:76:0:

axml.h:1508:14: note: declared here

 extern void *rax_calloc(size_t n, size_t size);

              ^

axml.c:8641:2: error: expected ‘;’ before ‘}’ token

  }

  ^

make: *** [axml.o] Error 1

[Alexandros Stamatakis]

Hi Wayne,

thanks I just pushed a fix,

Alexis

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Alexandros (Alexis) Stamatakis

Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology
Adjunct Professor, Dept. of Ecology and Evolutionary Biology, University
of Arizona at Tucson

www.exelixis-lab.org