Hi Kerri,
Those file handling exceptions are expected. I did not experience this issue on Phonegap 1.3 (which I was on prior to upgrading Cordova 3.6... ancient, I know) and KitKat, or on Cordova 3.6 and a pre KitKat device.
It seems like Cordova is failing to load the plugins. The plugins are listed correctly in the config.xml file. The app works intermittently, I have to exit and re-enter the app several times to get it to work. When the app doesn't work, it only loads some of the HTML from the "index.html" file. Some plugins need to be loaded and that is when the problems start, which can be seen by this line:
11-18 12:16:18.404: D/CordovaLog(7834): file:///android_asset/www/JS/Lib/ViewManager.js: Line 161 : Uncaught ReferenceError: Helper_Plugin is not defined
In the onLoad function in "index.html", I am loading the plugin like so: Helper_Plugin = cordova.require("cordova/plugin/Helper_Plugin");
I wonder if that onLoad function is not called before the "UncaughtReferenceError"?