I mis-spoke when I said error, I meant to say notice. I am still wondering why it didn't use the variables in agent.conf. There is nothing in either the server or agent logs except showing some errors on the database side that I dont think are related.
2017/01/17 15:09:55 ossec-dbd(5203): ERROR: Error executing query 'SELECT id FROM location WHERE name = 'mvsc1lx071->ossec-monitord' AND server_id = '1' LIMIT 1'. Error: 'Lost connection to MySQL server during query'.
2017/01/17 15:09:55 ossec-dbd(5209): INFO: Closing connection to database.
2017/01/17 15:09:55 ossec-dbd(5210): INFO: Attempting to reconnect to database.
2017/01/17 15:16:16 ossec-dbd(5204): ERROR: Database error. Unable to run query.
2017/01/17 15:16:16 ossec-dbd(5203): ERROR: Error executing query 'INSERT INTO alert(id,server_id,rule_id,timestamp,location_id,src_ip,src_port,dst_ip,dst_port,alertid) VALUES ('38714', '1', '5502','1484691376', '107', '0', '0', '0', '0', '1484691373.909744')'. Error: 'Duplicate entry '38714-1' for key 'PRIMARY''.
2017/01/17 15:16:16 ossec-dbd(5209): INFO: Closing connection to database.
2017/01/17 15:16:16 ossec-dbd(5210): INFO: Attempting to reconnect to database.
2017/01/17 15:16:17 ossec-dbd: Connected to database 'ossec' at '10.69.10.121'.
2017/01/17 15:16:17 ossec-dbd(5204): ERROR: Database error. Unable to run query.
2017/01/17 15:16:20 ossec-rootcheck: INFO: Starting rootcheck scan.
2017/01/17 15:17:37 ossec-dbd(5203): ERROR: Error executing query 'SELECT id FROM location WHERE name = '(dvsc1lx0044) 10.69.65.44->syscheck' AND server_id = '1' LIMIT 1'. Error: 'Lost connection to MySQL server during query'.
2017/01/17 15:17:37 ossec-dbd(5209): INFO: Closing connection to database.
2017/01/17 15:17:37 ossec-dbd(5210): INFO: Attempting to reconnect to database.
2017/01/17 15:17:37 ossec-dbd: Connected to database 'ossec' at '10.69.10.121'.