Thanks for your reply. After setting LD_LIBRARY_PATH I can install nokogiri without specifying paths but I am getting this error:
$ gem install nokogiri -v 1.5.11
Fetching: nokogiri-1.5.11.gem (100%)
Building native extensions. This could take a while...
Successfully installed nokogiri-1.5.11
1 gem installed
Installing ri documentation for nokogiri-1.5.11...
Installing RDoc documentation for nokogiri-1.5.11...
$ nokogiri -v
/home/deploy/.rbenv/versions/1.9.3-p551/lib/ruby/1.9.1/rubygems/custom_require.rb:36:in `require': /usr/lib/x86_64-linux-gnu/libxslt.so.1: symbol xmlBufUse, version LIBXML2_2.9.0 not defined in file libxml2.so.2 with link time reference - /home/deploy/.rbenv/versions/1.9.3-p551/lib/ruby/gems/1.9.1/gems/nokogiri-1.5.11/lib/nokogiri/nokogiri.so (LoadError)