run_g09_initcond.pl error

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Filipe Belarmino

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Apr 15, 2016, 1:15:59 PM4/15/16
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I'm following the step for General Conditions with Wigner distribution. The initcon.log file is:


---------------------------------------------------------------------------
Starting .  $g09root/g09/bsd/g09.profile;$g09root/g09/g09 gaussian.com at Fri Apr 15 14:01:15 BRT 2016
Finished .  $g09root/g09/bsd/g09.profile;$g09root/g09/g09 gaussian.com with ERROR at Fri Apr 15 14:01:16 BRT 2016
---------------------------------------------------------------------------
Finished run_g09_initcond.pl with ERROR at Fri Apr 15 14:01:16 BRT 2016
--------------------------------------------------------------------------------



The gaussian.log file contains the following error:

------------------------
Symbolic Z-matrix:
 Charge =  0 Multiplicity = 1
 Unknown center nan
 Error termination via Lnk1e in /opt/versatushpc/softwares/gaussian-09d01/pgi-14.3/g09/l101.exe at Fri Apr 15 14:01:15 2016.
 Job cpu time:       0 days  0 hours  0 minutes  0.1 seconds.
 File lengths (MBytes):  RWF=     72 Int=      0 D2E=      0 Chk=     11 Scr=      1
-----------------------

But, the gaussian calculation works very well, I've already verificated.


What's the problem? I've seeking for solutions during many days, but I have'nt found the answer yet.

I'm begginer. Please, I need Help!

Rachel Crespo-Otero

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Apr 15, 2016, 1:27:11 PM4/15/16
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Hi Filipe, 

Please, take a look at the frequencies. Have you got any imaginary frequency? 

Best Regards, 

Rachel 


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Filipe Belarmino

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Apr 15, 2016, 1:40:07 PM4/15/16
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I saw that my optimization file contains "YES", but the freq calculation contains only "NO" in the convergence section.

------------------------------------------------------------------------------------------------
         Item               Value     Threshold  Converged?
 Maximum Force                 0.016335     0.000450     NO
 RMS        Force                 0.007586     0.000300     NO
 Maximum Displacement      0.028418     0.001800     NO
 RMS        Displacement      0.016966     0.001200     NO
 Predicted change in Energy=-1.282045D-03
----------------------------------------------------------------------

Is this the cause of the error?


I'll try reoptimize, so.

Rachel Crespo-Otero

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Apr 15, 2016, 1:55:13 PM4/15/16
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Hi Filipe, 

To generate the spectrum, you need an optimised structure, after optimisation you should perform a  
frequency calculation at the same level of theory. Before sending the spectrum simulation, check that
all the frequencies are real. 

Best Regards, 

Rachel 

Filipe Belarmino

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Apr 16, 2016, 12:22:05 AM4/16/16
to Newton-X
Now, the job works. I ploted the spectrum.

I'm very appreciated for your help.
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