Skeleton swcs

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Shruthi Ravindranath

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Feb 3, 2020, 1:31:25 PM2/3/20
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Is it possible to get skeleton .swc files using neuprint-python given a set of bodyIDs?

Bill Katz

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Feb 3, 2020, 2:44:13 PM2/3/20
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I'll leave the neuprint-python example for Stuart, but if you just need the skeleton .swc files, they can be downloaded entirely as explained here:
https://dvid.io/blog/release#downloads

Best,
Bill

Stuart Berg

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Feb 3, 2020, 5:08:14 PM2/3/20
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Hi Shruthi,

Bill's suggestion is best if you want to download a large fraction of the SWC files.  If you want to download a handful of SWC files, you can use Client.fetch_skeleton():


For now, that function returns a string, requiring you to save it to disk yourself.

Note: Make sure your version of neuprint-python is relatively up-to-date.

Best,
Stuart


Shruthi Ravindranath

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Feb 3, 2020, 5:24:05 PM2/3/20
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Great, thanks a lot!
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