I believe that that particular warning is what you get when you include certain headers from c++11.
Currently PNaCl's C++ compiler is based on clang/llvm 3.3, which has pretty good C++11 support. however the C++ standard library is still based on gcc's libstdc++ 4.6, which is fairly old (and IIRC from before C++11 was officially standardized/named; hence the message referring to c++0x rather than c++11). For now you should be able to use C++11 language features (e.g. auto, range-based for), but until we update the standard library (which should be soon but probably not for the very first release), you'll get these warnings and C++11 features which require standard library support may or may not work.